FFCP PHASE1:Hg19::chr1:223198500..223198519,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:223198500..223198519,- | |||
|coexpression_cluster_id=C49 | |coexpression_cluster_id=C49 | ||
|description=CAGE_peak_at_chr1:223198500..223198519,- | |description=CAGE_peak_at_chr1:223198500..223198519,- | ||
|id=chr1:223198500..223198519,- | |id=chr1:223198500..223198519,- | ||
|ontology_enrichment_celltype=CL:0002322!4.52e-59!5;CL:0000039!1.90e-26!7;CL:0000586!1.90e-26!7;CL:0000540!1.21e-18!6;CL:0000031!1.21e-18!6;CL:0000404!1.21e-18!6;CL:0000047!3.87e-14!8;CL:0000148!2.55e-11!10;CL:0000541!2.55e-11!10;CL:0000147!3.10e-08!14 | |ontology_enrichment_celltype=CL:0002322!4.52e-59!5;CL:0000039!1.90e-26!7;CL:0000586!1.90e-26!7;CL:0000540!1.21e-18!6;CL:0000031!1.21e-18!6;CL:0000404!1.21e-18!6;CL:0000047!3.87e-14!8;CL:0000148!2.55e-11!10;CL:0000541!2.55e-11!10;CL:0000147!3.10e-08!14 | ||
|ontology_enrichment_celltype_v019=CL:0002322;3.50e-98;5!CL:0002321;5.00e-33;15!CL:0000540;1.68e-30;6!CL:0000404;1.68e-30;6!CL:0000148;1.68e-18;10!CL:0000147;2.03e-13;14!CL:0000710;1.38e-09;20!CL:0002319;2.71e-07;25!CL:0000075;2.99e-07;27 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,3.88e-98,5;CL:0000540,1.38e-30,6;CL:0000031,1.38e-30,6;CL:0000404,1.38e-30,6;CL:0000047,3.80e-23,8;CL:0000148,1.73e-18,10;CL:0000541,1.73e-18,10;CL:0000147,2.07e-13,14;CL:0000133,1.07e-11,59;CL:0000221,1.26e-09,72;CL:0000710,1.40e-09,20;CL:0002319,2.60e-07,25;CL:0000075,3.02e-07,27 | |||
|ontology_enrichment_development_v019=CL:0000031;1.68e-30;6!CL:0000133;3.00e-07;59 | |||
|ontology_enrichment_disease=DOID:3095!4.62e-13!22;DOID:2994!4.62e-13!22 | |ontology_enrichment_disease=DOID:3095!4.62e-13!22;DOID:2994!4.62e-13!22 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000473!1.44e-13!8;UBERON:0002135!7.68e-13!1;UBERON:0003135!5.02e-10!11;UBERON:0002133!4.69e-07!2 | |ontology_enrichment_uberon=UBERON:0000473!1.44e-13!8;UBERON:0002135!7.68e-13!1;UBERON:0003135!5.02e-10!11;UBERON:0002133!4.69e-07!2 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p@chr1:223198500..223198519,- | |short_description=p@chr1:223198500..223198519,- | ||
}} | }} |
Latest revision as of 04:17, 28 July 2015
Short description: | p@chr1:223198500..223198519, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:223198500..223198519, - |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 3.88e-98 | 5 |
neuron | 1.38e-30 | 6 |
neuroblast | 1.38e-30 | 6 |
electrically signaling cell | 1.38e-30 | 6 |
neuronal stem cell | 3.80e-23 | 8 |
melanocyte | 1.73e-18 | 10 |
melanoblast | 1.73e-18 | 10 |
pigment cell | 2.07e-13 | 14 |
neurectodermal cell | 1.07e-11 | 59 |
ectodermal cell | 1.26e-09 | 72 |
neurecto-epithelial cell | 1.40e-09 | 20 |
neural cell | 2.60e-07 | 25 |
columnar/cuboidal epithelial cell | 3.02e-07 | 27 |