FFCP PHASE1:Hg19::chr1:50889103..50889145,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=63950 | |EntrezGene=63950 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13908 | |HGNC=13908 | ||
|TSSclassifier=strong | |||
|UniProt=Q96SC8 | |UniProt=Q96SC8 | ||
|association_with_transcript=0bp_to_NM_032110,uc010onb.1_5end | |association_with_transcript=0bp_to_NM_032110,uc010onb.1_5end | ||
|cluster_id=chr1:50889103..50889145,- | |||
|coexpression_cluster_id=C2590 | |coexpression_cluster_id=C2590 | ||
|description=CAGE_peak_1_at_DMRTA2_5end | |description=CAGE_peak_1_at_DMRTA2_5end | ||
|id=chr1:50889103..50889145,- | |id=chr1:50889103..50889145,- | ||
|ontology_enrichment_celltype=CL:0002076!4.98e-08!43;CL:0002319!7.47e-08!25;CL:0002368!2.72e-07!13 | |ontology_enrichment_celltype=CL:0002076!4.98e-08!43;CL:0002319!7.47e-08!25;CL:0002368!2.72e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:0002605;6.51e-11;3!CL:0000307;8.80e-10;3!CL:0002319;1.60e-08;25!CL:0002202;2.13e-08;9!CL:0002632;2.13e-08;9!CL:0000047;6.36e-08;2!CL:0000575;3.86e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,6.01e-11,3;CL:0000047,1.45e-10,8;CL:0000068,8.17e-10,3;CL:0000069,8.17e-10,3;CL:0000307,8.17e-10,3;CL:0000377,8.17e-10,3;CL:0002319,1.57e-08,25;CL:0002202,2.05e-08,9;CL:0002632,2.05e-08,9;CL:0002076,7.31e-08,42;CL:0000575,3.01e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000377;8.80e-10;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4362;1.35e-09;5!DOID:1749;3.00e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,1.70e-09,5;DOID:1749,2.83e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0001017!1.28e-21!82;UBERON:0005743!5.43e-20!86;UBERON:0000073!6.21e-20!94;UBERON:0001016!6.21e-20!94;UBERON:0000955!9.01e-19!69;UBERON:0006238!9.01e-19!69;UBERON:0002616!1.01e-17!59;UBERON:0001049!3.07e-17!57;UBERON:0005068!3.07e-17!57;UBERON:0006241!3.07e-17!57;UBERON:0007135!3.07e-17!57;UBERON:0002346!1.03e-16!90;UBERON:0002780!5.35e-15!41;UBERON:0001890!5.35e-15!41;UBERON:0006240!5.35e-15!41;UBERON:0003056!1.13e-14!61;UBERON:0003080!1.82e-14!42;UBERON:0003075!2.89e-14!86;UBERON:0007284!2.89e-14!86;UBERON:0000924!1.43e-13!173;UBERON:0006601!1.43e-13!173;UBERON:0000153!1.44e-13!129;UBERON:0007811!1.44e-13!129;UBERON:0001893!5.61e-13!34;UBERON:0000033!9.53e-13!123;UBERON:0002020!1.01e-12!34;UBERON:0003528!1.01e-12!34;UBERON:0002791!2.83e-12!33;UBERON:0004121!9.75e-12!169;UBERON:0001869!3.01e-11!32;UBERON:0000956!3.68e-11!25;UBERON:0000203!3.68e-11!25;UBERON:0002619!6.48e-08!22;UBERON:0001950!8.94e-08!20;UBERON:0000922!1.89e-07!612;UBERON:0000064!2.10e-07!219 | |ontology_enrichment_uberon=UBERON:0001017!1.28e-21!82;UBERON:0005743!5.43e-20!86;UBERON:0000073!6.21e-20!94;UBERON:0001016!6.21e-20!94;UBERON:0000955!9.01e-19!69;UBERON:0006238!9.01e-19!69;UBERON:0002616!1.01e-17!59;UBERON:0001049!3.07e-17!57;UBERON:0005068!3.07e-17!57;UBERON:0006241!3.07e-17!57;UBERON:0007135!3.07e-17!57;UBERON:0002346!1.03e-16!90;UBERON:0002780!5.35e-15!41;UBERON:0001890!5.35e-15!41;UBERON:0006240!5.35e-15!41;UBERON:0003056!1.13e-14!61;UBERON:0003080!1.82e-14!42;UBERON:0003075!2.89e-14!86;UBERON:0007284!2.89e-14!86;UBERON:0000924!1.43e-13!173;UBERON:0006601!1.43e-13!173;UBERON:0000153!1.44e-13!129;UBERON:0007811!1.44e-13!129;UBERON:0001893!5.61e-13!34;UBERON:0000033!9.53e-13!123;UBERON:0002020!1.01e-12!34;UBERON:0003528!1.01e-12!34;UBERON:0002791!2.83e-12!33;UBERON:0004121!9.75e-12!169;UBERON:0001869!3.01e-11!32;UBERON:0000956!3.68e-11!25;UBERON:0000203!3.68e-11!25;UBERON:0002619!6.48e-08!22;UBERON:0001950!8.94e-08!20;UBERON:0000922!1.89e-07!612;UBERON:0000064!2.10e-07!219 | ||
|ontology_enrichment_uberon_v019=UBERON:0000002;5.26e-08;6!UBERON:0001560;5.26e-08;6!UBERON:0003126;3.93e-07;7!UBERON:0001005;3.93e-07;7!UBERON:0007196;8.36e-07;15!UBERON:0001558;8.36e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000002,6.38e-08,6;UBERON:0001560,6.38e-08,6;UBERON:0003126,4.10e-07,7;UBERON:0001005,4.10e-07,7;UBERON:0001017,7.63e-07,81;UBERON:0007196,8.60e-07,15;UBERON:0001558,8.60e-07,15 | |||
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| ||
|short_description=p1@DMRTA2 | |short_description=p1@DMRTA2 | ||
}} | }} |
Latest revision as of 10:56, 18 September 2015
Short description: | p1@DMRTA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_DMRTA2_5end |
Coexpression cluster: | C2590_Neural_acute_Corneal_Neurons_Astrocyte_anaplastic_Ciliary |
Association with transcript: | 0bp_to_NM_032110, uc010onb.1_5end |
EntrezGene: | DMRTA2 |
HGNC: | 13908 |
UniProt: | Q96SC8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 6.01e-11 | 3 |
neuronal stem cell | 1.45e-10 | 8 |
duct epithelial cell | 8.17e-10 | 3 |
branched duct epithelial cell | 8.17e-10 | 3 |
tracheal epithelial cell | 8.17e-10 | 3 |
tracheoblast | 8.17e-10 | 3 |
neural cell | 1.57e-08 | 25 |
epithelial cell of tracheobronchial tree | 2.05e-08 | 9 |
epithelial cell of lower respiratory tract | 2.05e-08 | 9 |
endo-epithelial cell | 7.31e-08 | 42 |
corneal epithelial cell | 3.01e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
uterine cervix | 6.38e-08 | 6 |
neck of organ | 6.38e-08 | 6 |
trachea | 4.10e-07 | 7 |
respiratory airway | 4.10e-07 | 7 |
central nervous system | 7.63e-07 | 81 |
tracheobronchial tree | 8.60e-07 | 15 |
lower respiratory tract | 8.60e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 1.70e-09 | 5 |
squamous cell carcinoma | 2.83e-07 | 14 |