FFCP PHASE1:Hg19::chr1:62668364..62668368,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:62668364..62668368,+ | |||
|coexpression_cluster_id=C49 | |coexpression_cluster_id=C49 | ||
|description=CAGE_peak_at_chr1:62668364..62668368,+ | |description=CAGE_peak_at_chr1:62668364..62668368,+ | ||
|id=chr1:62668364..62668368,+ | |id=chr1:62668364..62668368,+ | ||
|ontology_enrichment_celltype=CL:0002322!1.01e-19!5;CL:0000039!1.33e-19!7;CL:0000586!1.33e-19!7;CL:0002536!1.87e-08!2 | |ontology_enrichment_celltype=CL:0002322!1.01e-19!5;CL:0000039!1.33e-19!7;CL:0000586!1.33e-19!7;CL:0002536!1.87e-08!2 | ||
|ontology_enrichment_celltype_v019=CL:0000039;1.01e-32;7!CL:0000586;1.01e-32;7!CL:0002322;9.26e-26;5!CL:0000540;2.93e-22;6!CL:0000404;2.93e-22;6!CL:0002321;5.15e-09;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,6.43e-33,7;CL:0000586,6.43e-33,7;CL:0002322,9.27e-26,5;CL:0000540,3.04e-22,6;CL:0000031,3.04e-22,6;CL:0000404,3.04e-22,6;CL:0000047,7.42e-17,8 | |||
|ontology_enrichment_development_v019=UBERON:0009117;4.84e-23;10!UBERON:0005564;4.84e-23;10!CL:0000031;2.93e-22;6 | |||
|ontology_enrichment_disease=DOID:3095!1.54e-18!22;DOID:2994!1.54e-18!22 | |ontology_enrichment_disease=DOID:3095!1.54e-18!22;DOID:2994!1.54e-18!22 | ||
|ontology_enrichment_disease_v019=DOID:3095;3.98e-16;22!DOID:2994;3.98e-16;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,3.34e-16,22;DOID:2994,3.34e-16,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!2.46e-08!8 | |ontology_enrichment_uberon=UBERON:0000473!2.46e-08!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.08e-28;8!UBERON:0003135;5.53e-21;11!UBERON:0000991;3.79e-11;21!UBERON:0003101;1.18e-10;22!UBERON:0000079;1.18e-10;22!UBERON:0000922;1.72e-08;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,7.31e-29,8;UBERON:0003135,4.16e-21,11;UBERON:0000991,3.27e-11,21;UBERON:0009196,3.27e-11,21;UBERON:0009117,3.27e-11,21;UBERON:0005564,3.27e-11,21;UBERON:0004176,1.03e-10,22;UBERON:0003101,1.03e-10,22;UBERON:0000079,1.03e-10,22 | |||
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| ||
|short_description=p@chr1:62668364..62668368,+ | |short_description=p@chr1:62668364..62668368,+ | ||
}} | }} |
Latest revision as of 09:35, 28 July 2015
Short description: | p@chr1:62668364..62668368, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:62668364..62668368, + |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 6.43e-33 | 7 |
germ cell | 6.43e-33 | 7 |
embryonic stem cell | 9.27e-26 | 5 |
neuron | 3.04e-22 | 6 |
neuroblast | 3.04e-22 | 6 |
electrically signaling cell | 3.04e-22 | 6 |
neuronal stem cell | 7.42e-17 | 8 |
Ontology term | p-value | n |
---|---|---|
testis | 7.31e-29 | 8 |
male reproductive organ | 4.16e-21 | 11 |
gonad | 3.27e-11 | 21 |
indifferent external genitalia | 3.27e-11 | 21 |
indifferent gonad | 3.27e-11 | 21 |
gonad primordium | 3.27e-11 | 21 |
external genitalia | 1.03e-10 | 22 |
male organism | 1.03e-10 | 22 |
male reproductive system | 1.03e-10 | 22 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 3.34e-16 | 22 |
germ cell cancer | 3.34e-16 | 22 |