FFCP PHASE1:Hg19::chr20:22565646..22565665,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:22565646..22565665,- | |||
|coexpression_cluster_id=C4016 | |coexpression_cluster_id=C4016 | ||
|description=CAGE_peak_at_chr20:22565646..22565665,- | |description=CAGE_peak_at_chr20:22565646..22565665,- | ||
|id=chr20:22565646..22565665,- | |id=chr20:22565646..22565665,- | ||
|ontology_enrichment_celltype=CL:0000066!4.25e-15!254;CL:0000223!7.79e-12!59;CL:0002076!1.28e-09!43;CL:0000082!3.21e-08!19;CL:0002368!5.94e-08!13 | |ontology_enrichment_celltype=CL:0000066!4.25e-15!254;CL:0000223!7.79e-12!59;CL:0002076!1.28e-09!43;CL:0000082!3.21e-08!19;CL:0002368!5.94e-08!13 | ||
|ontology_enrichment_celltype_v019=CL:0000182;2.66e-11;12!CL:0002553;1.42e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.33e-11,12;CL:0002553,1.15e-09,1 | |||
|ontology_enrichment_development_v019=UBERON:0001041;9.51e-13;30!UBERON:0004161;2.60e-12;11!UBERON:0009497;1.91e-10;13 | |||
|ontology_enrichment_disease=DOID:305!2.14e-19!106;DOID:0050687!1.09e-15!143;DOID:162!2.82e-12!235;DOID:14566!9.41e-12!239;DOID:0050615!3.06e-08!16;DOID:3119!2.66e-07!14;DOID:1324!9.84e-07!15 | |ontology_enrichment_disease=DOID:305!2.14e-19!106;DOID:0050687!1.09e-15!143;DOID:162!2.82e-12!235;DOID:14566!9.41e-12!239;DOID:0050615!3.06e-08!16;DOID:3119!2.66e-07!14;DOID:1324!9.84e-07!15 | ||
|ontology_enrichment_disease_v019=DOID:3371;4.26e-10;1!DOID:4549;4.26e-10;1!DOID:5861;4.26e-10;1!DOID:6496;4.26e-10;1!DOID:3347;6.04e-10;1!DOID:0050619;1.42e-09;1!DOID:1357;1.42e-09;1!DOID:0050615;1.98e-08;16 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,4.46e-10,1;DOID:4549,4.46e-10,1;DOID:5861,4.46e-10,1;DOID:6496,4.46e-10,1;DOID:3347,5.31e-10,1;DOID:0050619,8.91e-10,1;DOID:1357,8.91e-10,1;DOID:0050615,1.66e-08,16;DOID:305,9.27e-08,106 | |||
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|ontology_enrichment_uberon_v019=UBERON:0001764;1.42e-09;1!UBERON:0001825;1.42e-09;1!UBERON:0002107;3.43e-07;19!UBERON:0006925;3.43e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005177,8.86e-10,101;UBERON:0001764,8.91e-10,1;UBERON:0001825,8.91e-10,1;UBERON:0007499,3.80e-08,25;UBERON:0009856,7.95e-08,26;UBERON:0002107,3.16e-07,19;UBERON:0006925,3.16e-07,19;UBERON:0008836,3.16e-07,19 | |||
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| ||
|short_description=p@chr20:22565646..22565665,- | |short_description=p@chr20:22565646..22565665,- | ||
}} | }} |
Latest revision as of 12:27, 28 July 2015
Short description: | p@chr20:22565646..22565665, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:22565646..22565665, - |
Coexpression cluster: | C4016_gastrointestinal_anaplastic_maxillary_small_smallcell_argyrophil_Bronchial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.33e-11 | 12 |
lung fibroblast | 1.15e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
trunk region element | 8.86e-10 | 101 |
maxillary sinus | 8.91e-10 | 1 |
paranasal sinus | 8.91e-10 | 1 |
epithelial sac | 3.80e-08 | 25 |
sac | 7.95e-08 | 26 |
liver | 3.16e-07 | 19 |
digestive gland | 3.16e-07 | 19 |
liver bud | 3.16e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 4.46e-10 | 1 |
extraosseous chondrosarcoma | 4.46e-10 | 1 |
myxoid chondrosarcoma | 4.46e-10 | 1 |
extraskeletal myxoid chondrosarcoma | 4.46e-10 | 1 |
osteosarcoma | 5.31e-10 | 1 |
paranasal sinus cancer | 8.91e-10 | 1 |
maxillary sinus cancer | 8.91e-10 | 1 |
respiratory system cancer | 1.66e-08 | 16 |
carcinoma | 9.27e-08 | 106 |