FFCP PHASE1:Hg19::chr21:43816105..43816116,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64699 | |EntrezGene=64699 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11877 | |HGNC=11877 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=51bp_to_ENST00000433957_5end | |association_with_transcript=51bp_to_ENST00000433957_5end | ||
|cluster_id=chr21:43816105..43816116,- | |||
|coexpression_cluster_id=C2633 | |coexpression_cluster_id=C2633 | ||
|description=CAGE_peak_3_at_TMPRSS3_5end | |description=CAGE_peak_3_at_TMPRSS3_5end | ||
|id=chr21:43816105..43816116,- | |id=chr21:43816105..43816116,- | ||
|ontology_enrichment_celltype=CL:0002150!1.85e-08!3;CL:0000861!1.85e-08!3 | |ontology_enrichment_celltype=CL:0002150!1.85e-08!3;CL:0000861!1.85e-08!3 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.04e-21;29 | |||
|ontology_enrichment_disease=DOID:305!8.69e-14!106;DOID:0050687!6.54e-09!143 | |ontology_enrichment_disease=DOID:305!8.69e-14!106;DOID:0050687!6.54e-09!143 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,9.60e-17,106;DOID:0050687,1.17e-11,143;DOID:162,3.35e-10,235;DOID:14566,6.48e-10,239 | |||
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|ontology_enrichment_uberon_v019=UBERON:0001737;9.94e-73;9!UBERON:0001557;9.94e-73;9!UBERON:0000072;9.88e-16;37!UBERON:0000065;2.75e-13;44!UBERON:0001004;6.79e-08;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,9.98e-73,9;UBERON:0001557,8.15e-34,19;UBERON:0008947,2.98e-16,38;UBERON:0003258,2.98e-16,38;UBERON:0000072,7.02e-13,47;UBERON:0000065,4.92e-11,54;UBERON:0001041,1.57e-09,87;UBERON:0001004,1.73e-09,74 | |||
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| ||
|short_description=p3@TMPRSS3 | |short_description=p3@TMPRSS3 | ||
}} | }} |
Latest revision as of 14:18, 18 September 2015
Short description: | p3@TMPRSS3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TMPRSS3_5end |
Coexpression cluster: | C2633_smallcell_Hep2_gall_cervical_splenic_mesothelioma_serous |
Association with transcript: | 51bp_to_ENST00000433957_5end |
EntrezGene: | TMPRSS3 |
HGNC: | 11877 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
larynx | 9.98e-73 | 9 |
upper respiratory tract | 8.15e-34 | 19 |
respiratory primordium | 2.98e-16 | 38 |
endoderm of foregut | 2.98e-16 | 38 |
segment of respiratory tract | 7.02e-13 | 47 |
respiratory tract | 4.92e-11 | 54 |
foregut | 1.57e-09 | 87 |
respiratory system | 1.73e-09 | 74 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 9.60e-17 | 106 |
cell type cancer | 1.17e-11 | 143 |
cancer | 3.35e-10 | 235 |
disease of cellular proliferation | 6.48e-10 | 239 |