FFCP PHASE1:Hg19::chr22:35462139..35462156,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=91464 | |EntrezGene=91464 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28084 | |HGNC=28084 | ||
|TSSclassifier=strong | |||
|UniProt=Q2M1V0 | |UniProt=Q2M1V0 | ||
|association_with_transcript=9bp_to_NM_001008494,uc003anj.2_5end | |association_with_transcript=9bp_to_NM_001008494,uc003anj.2_5end | ||
|cluster_id=chr22:35462139..35462156,+ | |||
|coexpression_cluster_id=C25 | |coexpression_cluster_id=C25 | ||
|description=CAGE_peak_1_at_ISX_5end | |description=CAGE_peak_1_at_ISX_5end | ||
|id=chr22:35462139..35462156,+ | |id=chr22:35462139..35462156,+ | ||
|ontology_enrichment_celltype=CL:0000181!8.95e-13!12;CL:0000417!8.95e-13!12;CL:0000668!8.95e-13!12;CL:0000414!8.95e-13!12;CL:0000412!8.95e-13!12;CL:0000182!8.95e-13!12;CL:0002563!1.54e-10!4;CL:0000223!3.76e-07!59 | |ontology_enrichment_celltype=CL:0000181!8.95e-13!12;CL:0000417!8.95e-13!12;CL:0000668!8.95e-13!12;CL:0000414!8.95e-13!12;CL:0000412!8.95e-13!12;CL:0000182!8.95e-13!12;CL:0002563!1.54e-10!4;CL:0000223!3.76e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0002535;3.89e-11;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,4.52e-11,2 | |||
|ontology_enrichment_development_v019=UBERON:0004161;4.34e-08;11!UBERON:0009497;5.59e-07;13 | |||
|ontology_enrichment_disease=DOID:178!1.77e-10!1;DOID:326!1.77e-10!1;DOID:3978!1.77e-10!1;DOID:3394!1.77e-10!1;DOID:5844!1.77e-10!1 | |ontology_enrichment_disease=DOID:178!1.77e-10!1;DOID:326!1.77e-10!1;DOID:3978!1.77e-10!1;DOID:3394!1.77e-10!1;DOID:5844!1.77e-10!1 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.09e-26!27;UBERON:0001155!1.72e-26!9;UBERON:0000059!1.13e-21!11;UBERON:0005409!1.69e-20!35;UBERON:0009854!2.29e-14!23;UBERON:0004921!3.64e-14!129;UBERON:0004185!3.64e-14!129;UBERON:0009856!1.15e-12!26;UBERON:0002107!2.44e-12!19;UBERON:0006925!2.44e-12!19;UBERON:0008836!2.44e-12!19;UBERON:0001007!2.14e-11!155;UBERON:0001555!2.14e-11!155;UBERON:0007026!2.14e-11!155;UBERON:0001154!9.05e-11!1;UBERON:0001153!9.05e-11!1;UBERON:0008835!1.22e-10!22;UBERON:0003894!1.22e-10!22;UBERON:0001242!1.54e-10!4;UBERON:0001262!1.54e-10!4;UBERON:0004786!1.54e-10!4;UBERON:0004808!1.54e-10!4;UBERON:0001277!1.54e-10!4;UBERON:0003929!2.91e-10!54;UBERON:0004119!2.96e-10!169;UBERON:0000925!2.96e-10!169;UBERON:0006595!2.96e-10!169;UBERON:0007499!2.39e-09!25;UBERON:0009497!2.39e-09!25;UBERON:0000015!2.39e-09!25;UBERON:0002423!2.39e-09!25;UBERON:0006235!2.39e-09!25;UBERON:0004161!2.39e-09!25;UBERON:0005057!5.53e-09!26;UBERON:0003350!1.32e-08!5;UBERON:0004907!1.72e-08!5;UBERON:0002365!1.65e-07!31;UBERON:0002330!1.65e-07!31 | |ontology_enrichment_uberon=UBERON:0000160!1.09e-26!27;UBERON:0001155!1.72e-26!9;UBERON:0000059!1.13e-21!11;UBERON:0005409!1.69e-20!35;UBERON:0009854!2.29e-14!23;UBERON:0004921!3.64e-14!129;UBERON:0004185!3.64e-14!129;UBERON:0009856!1.15e-12!26;UBERON:0002107!2.44e-12!19;UBERON:0006925!2.44e-12!19;UBERON:0008836!2.44e-12!19;UBERON:0001007!2.14e-11!155;UBERON:0001555!2.14e-11!155;UBERON:0007026!2.14e-11!155;UBERON:0001154!9.05e-11!1;UBERON:0001153!9.05e-11!1;UBERON:0008835!1.22e-10!22;UBERON:0003894!1.22e-10!22;UBERON:0001242!1.54e-10!4;UBERON:0001262!1.54e-10!4;UBERON:0004786!1.54e-10!4;UBERON:0004808!1.54e-10!4;UBERON:0001277!1.54e-10!4;UBERON:0003929!2.91e-10!54;UBERON:0004119!2.96e-10!169;UBERON:0000925!2.96e-10!169;UBERON:0006595!2.96e-10!169;UBERON:0007499!2.39e-09!25;UBERON:0009497!2.39e-09!25;UBERON:0000015!2.39e-09!25;UBERON:0002423!2.39e-09!25;UBERON:0006235!2.39e-09!25;UBERON:0004161!2.39e-09!25;UBERON:0005057!5.53e-09!26;UBERON:0003350!1.32e-08!5;UBERON:0004907!1.72e-08!5;UBERON:0002365!1.65e-07!31;UBERON:0002330!1.65e-07!31 | ||
|ontology_enrichment_uberon_v019=UBERON:0000160;1.17e-39;17!UBERON:0002108;1.57e-36;4!UBERON:0005409;4.51e-31;22!UBERON:0004921;2.53e-18;33!UBERON:0006955;3.89e-11;2!UBERON:0004801;3.89e-11;2!UBERON:0001155;6.63e-10;9!UBERON:0000059;2.87e-08;11!UBERON:0001007;3.44e-08;81!UBERON:0001555;4.99e-08;54!UBERON:0002114;6.13e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.09e-39,17;UBERON:0002108,1.78e-36,4;UBERON:0005409,1.60e-27,25;UBERON:0006955,4.52e-11,2;UBERON:0004801,4.52e-11,2;UBERON:0004921,2.40e-10,118;UBERON:0001155,6.48e-10,9;UBERON:0001007,2.37e-08,145;UBERON:0001555,2.37e-08,145;UBERON:0007026,2.37e-08,145;UBERON:0000059,2.82e-08,11;UBERON:0002114,6.34e-08,2;UBERON:0004119,1.57e-07,160;UBERON:0000925,1.57e-07,160;UBERON:0006595,1.57e-07,160 | |||
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|short_description=p1@ISX | |short_description=p1@ISX | ||
}} | }} |
Latest revision as of 23:21, 19 September 2015
Short description: | p1@ISX |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ISX_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | 9bp_to_NM_001008494, uc003anj.2_5end |
EntrezGene: | ISX |
HGNC: | 28084 |
UniProt: | Q2M1V0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 4.52e-11 | 2 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.09e-39 | 17 |
small intestine | 1.78e-36 | 4 |
gastrointestinal system | 1.60e-27 | 25 |
uterine epithelium | 4.52e-11 | 2 |
cervix epithelium | 4.52e-11 | 2 |
subdivision of digestive tract | 2.40e-10 | 118 |
colon | 6.48e-10 | 9 |
digestive system | 2.37e-08 | 145 |
digestive tract | 2.37e-08 | 145 |
primitive gut | 2.37e-08 | 145 |
large intestine | 2.82e-08 | 11 |
duodenum | 6.34e-08 | 2 |
endoderm-derived structure | 1.57e-07 | 160 |
endoderm | 1.57e-07 | 160 |
presumptive endoderm | 1.57e-07 | 160 |