FFCP PHASE1:Hg19::chr19:16187197..16187204,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:16187197..16187204,+
|short_description=p8@TPM4
|description=CAGE_peak_8_at_TPM4_5end
|association_with_transcript=62bp_to_ENST00000300933,NM_003290,uc002...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7171 | |EntrezGene=7171 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12013 | |HGNC=12013 | ||
|TSSclassifier=strong | |||
|UniProt=P67936 | |UniProt=P67936 | ||
|association_with_transcript=62bp_to_ENST00000300933,NM_003290,uc002ndj.2_5end | |||
|cluster_id=chr19:16187197..16187204,+ | |||
|description=CAGE_peak_8_at_TPM4_5end | |||
|id=chr19:16187197..16187204,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000039;2.38e-08;7!CL:0000586;2.38e-08;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.07e-08,7;CL:0000586,1.07e-08,7 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3095!8.44e-07!22;DOID:2994!8.44e-07!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;2.96e-09;22!DOID:2994;2.96e-09;22!DOID:5409;1.26e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.67e-09,22;DOID:2994,1.67e-09,22;DOID:5409,3.07e-08,4 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0003714;4.74e-09;2!UBERON:0004089;3.95e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003714,4.83e-09,2;UBERON:0004089,1.16e-07,2 | |||
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| ||
|short_description=p8@TPM4 | |||
}} | }} |
Latest revision as of 09:03, 16 September 2015
Short description: | p8@TPM4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_TPM4_5end |
Coexpression cluster: | NA |
Association with transcript: | 62bp_to_ENST00000300933, NM_003290, uc002ndj.2_5end |
EntrezGene: | TPM4 |
HGNC: | 12013 |
UniProt: | P67936 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.07e-08 | 7 |
germ cell | 1.07e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
neural tissue | 4.83e-09 | 2 |
midface | 1.16e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.67e-09 | 22 |
germ cell cancer | 1.67e-09 | 22 |
lung small cell carcinoma | 3.07e-08 | 4 |