FFCP PHASE1:Hg19::chr3:125775994..125776003,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54946 | |EntrezGene=54946 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=31046 | |HGNC=31046 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-313bp_to_ENST00000383598_5end | |association_with_transcript=-313bp_to_ENST00000383598_5end | ||
|cluster_id=chr3:125775994..125776003,- | |||
|coexpression_cluster_id=C106 | |coexpression_cluster_id=C106 | ||
|description=CAGE_peak_13_at_SLC41A3_5end | |description=CAGE_peak_13_at_SLC41A3_5end | ||
|id=chr3:125775994..125776003,- | |id=chr3:125775994..125776003,- | ||
|ontology_enrichment_celltype=CL:0002150!7.26e-18!3;CL:0000861!7.26e-18!3;CL:0002599!8.97e-07!1 | |ontology_enrichment_celltype=CL:0002150!7.26e-18!3;CL:0000861!7.26e-18!3;CL:0002599!8.97e-07!1 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;4.04e-14;29 | |||
|ontology_enrichment_disease=DOID:305!1.01e-17!106;DOID:0050687!8.51e-15!143;DOID:162!2.93e-14!235;DOID:14566!7.82e-14!239;DOID:1749!3.63e-09!14 | |ontology_enrichment_disease=DOID:305!1.01e-17!106;DOID:0050687!8.51e-15!143;DOID:162!2.93e-14!235;DOID:14566!7.82e-14!239;DOID:1749!3.63e-09!14 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.71e-11,106;DOID:0050687,1.66e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0001737!2.31e-38!9;UBERON:0001557!6.56e-22!19;UBERON:0003343!2.10e-12!4;UBERON:0004785!2.10e-12!4;UBERON:0003729!5.07e-10!5;UBERON:0001007!3.67e-08!155;UBERON:0001555!3.67e-08!155;UBERON:0007026!3.67e-08!155;UBERON:0000072!3.91e-08!46;UBERON:0008947!3.98e-08!38;UBERON:0003258!3.98e-08!38;UBERON:0001041!8.56e-08!98;UBERON:0004119!3.64e-07!169;UBERON:0000925!3.64e-07!169;UBERON:0006595!3.64e-07!169;UBERON:0000077!4.31e-07!130;UBERON:0004921!4.40e-07!129;UBERON:0004185!4.40e-07!129;UBERON:0001004!4.74e-07!72;UBERON:0000065!7.34e-07!53 | |ontology_enrichment_uberon=UBERON:0001737!2.31e-38!9;UBERON:0001557!6.56e-22!19;UBERON:0003343!2.10e-12!4;UBERON:0004785!2.10e-12!4;UBERON:0003729!5.07e-10!5;UBERON:0001007!3.67e-08!155;UBERON:0001555!3.67e-08!155;UBERON:0007026!3.67e-08!155;UBERON:0000072!3.91e-08!46;UBERON:0008947!3.98e-08!38;UBERON:0003258!3.98e-08!38;UBERON:0001041!8.56e-08!98;UBERON:0004119!3.64e-07!169;UBERON:0000925!3.64e-07!169;UBERON:0006595!3.64e-07!169;UBERON:0000077!4.31e-07!130;UBERON:0004921!4.40e-07!129;UBERON:0004185!4.40e-07!129;UBERON:0001004!4.74e-07!72;UBERON:0000065!7.34e-07!53 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;3.54e-44;9!UBERON:0001557;3.54e-44;9!UBERON:0000065;1.69e-10;44!UBERON:0000072;2.45e-10;37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,5.54e-44,9;UBERON:0001557,3.53e-21,19;UBERON:0008947,7.71e-11,38;UBERON:0003258,7.71e-11,38;UBERON:0000072,7.66e-09,47;UBERON:0000065,9.60e-08,54 | |||
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|short_description=p13@SLC41A3 | |short_description=p13@SLC41A3 | ||
}} | }} |
Latest revision as of 03:41, 20 September 2015
Short description: | p13@SLC41A3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_SLC41A3_5end |
Coexpression cluster: | C106_Hep2_epitheloid_placenta_cervical_rectal_anaplastic_glassy |
Association with transcript: | -313bp_to_ENST00000383598_5end |
EntrezGene: | SLC41A3 |
HGNC: | 31046 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
larynx | 5.54e-44 | 9 |
upper respiratory tract | 3.53e-21 | 19 |
respiratory primordium | 7.71e-11 | 38 |
endoderm of foregut | 7.71e-11 | 38 |
segment of respiratory tract | 7.66e-09 | 47 |
respiratory tract | 9.60e-08 | 54 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.71e-11 | 106 |
cell type cancer | 1.66e-08 | 143 |