FFCP PHASE1:Hg19::chr4:72204833..72204846,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8671 | |EntrezGene=8671 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11030 | |HGNC=11030 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y6R1 | |UniProt=Q9Y6R1 | ||
|association_with_transcript=63bp_to_ENST00000340595,ENST00000512686,NM_003759,uc003hgb.3,uc003hgc.3_5end | |association_with_transcript=63bp_to_ENST00000340595,ENST00000512686,NM_003759,uc003hgb.3,uc003hgc.3_5end | ||
|cluster_id=chr4:72204833..72204846,+ | |||
|coexpression_cluster_id=C51 | |coexpression_cluster_id=C51 | ||
|description=CAGE_peak_12_at_SLC4A4_5end | |description=CAGE_peak_12_at_SLC4A4_5end | ||
|id=chr4:72204833..72204846,+ | |id=chr4:72204833..72204846,+ | ||
|ontology_enrichment_celltype=CL:0002582!2.64e-09!3;CL:0000946!2.21e-07!1;CL:0000786!2.21e-07!1;CL:0000980!2.21e-07!1 | |ontology_enrichment_celltype=CL:0002582!2.64e-09!3;CL:0000946!2.21e-07!1;CL:0000786!2.21e-07!1;CL:0000980!2.21e-07!1 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003918;5.64e-45;10!UBERON:0007687;5.64e-45;10!UBERON:0003104;1.01e-15;31 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002146!2.35e-07!1;UBERON:0005623!2.35e-07!1 | |ontology_enrichment_uberon=UBERON:0002146!2.35e-07!1;UBERON:0005623!2.35e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0002113;2.13e-19;24!UBERON:0011143;2.13e-19;24!UBERON:0000489;3.13e-16;29!UBERON:0006554;1.01e-15;30!UBERON:0001008;1.01e-15;30!UBERON:0005172;5.21e-07;52!UBERON:0005173;5.21e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,5.50e-18,26;UBERON:0003918,5.50e-18,26;UBERON:0011143,5.50e-18,26;UBERON:0005095,5.50e-18,26;UBERON:0007687,5.50e-18,26;UBERON:0000489,3.01e-15,31;UBERON:0006554,2.24e-10,47;UBERON:0001008,3.53e-10,48;UBERON:0005172,3.82e-09,54;UBERON:0005173,3.82e-09,54;UBERON:0002417,2.58e-08,60;UBERON:0000916,2.58e-08,60;UBERON:0003103,1.96e-07,68 | |||
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|short_description=p12@SLC4A4 | |short_description=p12@SLC4A4 | ||
}} | }} |
Latest revision as of 11:57, 18 September 2015
Short description: | p12@SLC4A4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_SLC4A4_5end |
Coexpression cluster: | C51_kidney_mesothelioma_renal_signet_gall_lung_pancreas |
Association with transcript: | 63bp_to_ENST00000340595, ENST00000512686, NM_003759, uc003hgb.3, uc003hgc.3_5end |
EntrezGene: | SLC4A4 |
HGNC: | 11030 |
UniProt: | Q9Y6R1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney | 5.50e-18 | 26 |
kidney mesenchyme | 5.50e-18 | 26 |
upper urinary tract | 5.50e-18 | 26 |
kidney rudiment | 5.50e-18 | 26 |
kidney field | 5.50e-18 | 26 |
cavitated compound organ | 3.01e-15 | 31 |
urinary system structure | 2.24e-10 | 47 |
renal system | 3.53e-10 | 48 |
abdomen element | 3.82e-09 | 54 |
abdominal segment element | 3.82e-09 | 54 |
abdominal segment of trunk | 2.58e-08 | 60 |
abdomen | 2.58e-08 | 60 |
compound organ | 1.96e-07 | 68 |