FFCP PHASE1:Hg19::chr4:77908859..77908883,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55752 | |EntrezGene=55752 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25589 | |HGNC=25589 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-57bp_to_ENST00000512333_5end | |association_with_transcript=-57bp_to_ENST00000512333_5end | ||
|cluster_id=chr4:77908859..77908883,+ | |||
|coexpression_cluster_id=C4426 | |coexpression_cluster_id=C4426 | ||
|description=CAGE_peak_5_at_SEPT11_5end | |description=CAGE_peak_5_at_SEPT11_5end | ||
|id=chr4:77908859..77908883,+ | |id=chr4:77908859..77908883,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.91e-38!180;CL:0000057!1.45e-21!75;CL:0000048!8.68e-18!430;CL:0000723!5.07e-17!436;CL:0000034!4.90e-16!444;CL:0000680!1.24e-15!57;CL:0000056!1.24e-15!57;CL:0000355!1.24e-15!57;CL:0000187!5.76e-14!54;CL:0002371!1.34e-13!591;CL:0000192!3.12e-13!42;CL:0000514!3.12e-13!42;CL:0000144!5.29e-12!625;CL:0000183!6.01e-12!59;CL:0000393!1.37e-11!60;CL:0000211!1.37e-11!60;CL:0002334!3.26e-11!12;CL:0000359!3.84e-11!32;CL:0002620!4.81e-09!23;CL:0000219!6.41e-09!390;CL:0000548!1.01e-08!679;CL:0000004!1.01e-08!679;CL:0000255!1.01e-08!679;CL:0000012!1.72e-08!682;CL:0002494!5.24e-08!16;CL:0000134!8.15e-08!358;CL:0002320!3.19e-07!365 | |ontology_enrichment_celltype=CL:0000055!1.91e-38!180;CL:0000057!1.45e-21!75;CL:0000048!8.68e-18!430;CL:0000723!5.07e-17!436;CL:0000034!4.90e-16!444;CL:0000680!1.24e-15!57;CL:0000056!1.24e-15!57;CL:0000355!1.24e-15!57;CL:0000187!5.76e-14!54;CL:0002371!1.34e-13!591;CL:0000192!3.12e-13!42;CL:0000514!3.12e-13!42;CL:0000144!5.29e-12!625;CL:0000183!6.01e-12!59;CL:0000393!1.37e-11!60;CL:0000211!1.37e-11!60;CL:0002334!3.26e-11!12;CL:0000359!3.84e-11!32;CL:0002620!4.81e-09!23;CL:0000219!6.41e-09!390;CL:0000548!1.01e-08!679;CL:0000004!1.01e-08!679;CL:0000255!1.01e-08!679;CL:0000012!1.72e-08!682;CL:0002494!5.24e-08!16;CL:0000134!8.15e-08!358;CL:0002320!3.19e-07!365 | ||
|ontology_enrichment_celltype_v019=CL:0002334;1.37e-12;12!CL:1000306;2.61e-11;4!CL:0002547;2.61e-11;4!CL:0002579;6.28e-09;3!CL:0002620;9.50e-09;23!CL:0002580;2.09e-08;3!CL:0000135;1.79e-07;3!CL:0000388;1.79e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.64e-19,76;CL:0002334,1.44e-12,12;CL:1000306,2.79e-11,4;CL:0002547,2.79e-11,4;CL:0000048,5.60e-11,427;CL:0000723,1.34e-10,433;CL:0000034,4.15e-10,441;CL:0002579,6.22e-09,3;CL:0002620,9.36e-09,23;CL:0002580,1.67e-08,3;CL:0000135,1.62e-07,3;CL:0000388,1.62e-07,3;CL:0000134,2.41e-07,354;CL:0002320,5.83e-07,361;CL:0000136,7.55e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:17;5.81e-08;5!DOID:450;5.81e-08;5!DOID:66;5.81e-08;5!DOID:423;5.81e-08;5!DOID:0080000;5.81e-08;5!DOID:11722;5.81e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,5.46e-08,5;DOID:450,5.46e-08,5;DOID:66,5.46e-08,5;DOID:423,5.46e-08,5;DOID:0080000,5.46e-08,5;DOID:11722,5.46e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0001134!6.84e-14!61;UBERON:0002036!6.84e-14!61;UBERON:0003082!6.84e-14!61;UBERON:0002385!4.12e-13!63;UBERON:0001015!4.12e-13!63;UBERON:0000383!4.12e-13!63;UBERON:0000914!1.58e-12!83;UBERON:0002329!1.58e-12!83;UBERON:0003077!1.58e-12!83;UBERON:0003059!1.58e-12!83;UBERON:0007282!1.58e-12!83;UBERON:0009618!1.58e-12!83;UBERON:0007285!1.58e-12!83;UBERON:0004290!2.32e-12!70;UBERON:0004872!2.66e-11!84;UBERON:0000486!1.39e-10!82;UBERON:0001637!1.86e-08!42;UBERON:0003509!1.86e-08!42;UBERON:0004572!1.86e-08!42;UBERON:0004573!3.85e-08!33;UBERON:0004571!3.85e-08!33;UBERON:0002384!6.51e-08!375;UBERON:0005256!3.39e-07!143;UBERON:0004535!5.41e-07!110;UBERON:0001981!9.44e-07!60;UBERON:0007500!9.44e-07!60;UBERON:0004537!9.44e-07!60;UBERON:0006965!9.44e-07!60 | |ontology_enrichment_uberon=UBERON:0001134!6.84e-14!61;UBERON:0002036!6.84e-14!61;UBERON:0003082!6.84e-14!61;UBERON:0002385!4.12e-13!63;UBERON:0001015!4.12e-13!63;UBERON:0000383!4.12e-13!63;UBERON:0000914!1.58e-12!83;UBERON:0002329!1.58e-12!83;UBERON:0003077!1.58e-12!83;UBERON:0003059!1.58e-12!83;UBERON:0007282!1.58e-12!83;UBERON:0009618!1.58e-12!83;UBERON:0007285!1.58e-12!83;UBERON:0004290!2.32e-12!70;UBERON:0004872!2.66e-11!84;UBERON:0000486!1.39e-10!82;UBERON:0001637!1.86e-08!42;UBERON:0003509!1.86e-08!42;UBERON:0004572!1.86e-08!42;UBERON:0004573!3.85e-08!33;UBERON:0004571!3.85e-08!33;UBERON:0002384!6.51e-08!375;UBERON:0005256!3.39e-07!143;UBERON:0004535!5.41e-07!110;UBERON:0001981!9.44e-07!60;UBERON:0007500!9.44e-07!60;UBERON:0004537!9.44e-07!60;UBERON:0006965!9.44e-07!60 | ||
|ontology_enrichment_uberon_v019=UBERON:0004797;2.61e-11;4!UBERON:0000415;2.61e-11;4!UBERON:0007240;2.61e-11;4!UBERON:0005742;2.61e-11;4!UBERON:0005734;2.61e-11;4!UBERON:0004664;2.61e-11;4!UBERON:0004663;2.61e-11;4!UBERON:0003688;4.02e-11;6!UBERON:0002358;4.02e-11;6!UBERON:0003684;4.02e-11;6!UBERON:0001178;4.02e-11;6!UBERON:0004457;4.01e-10;9!UBERON:0000042;4.01e-10;9!UBERON:0000947;3.79e-08;21!UBERON:0010191;3.79e-08;21!UBERON:0007846;1.79e-07;3!UBERON:0000043;1.79e-07;3!UBERON:0007845;1.79e-07;3!UBERON:0004573;2.60e-07;33!UBERON:0004571;2.60e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000415,2.79e-11,4;UBERON:0007240,2.79e-11,4;UBERON:0005742,2.79e-11,4;UBERON:0005734,2.79e-11,4;UBERON:0004664,2.79e-11,4;UBERON:0004663,2.79e-11,4;UBERON:0003688,4.38e-11,6;UBERON:0002358,4.38e-11,6;UBERON:0003684,4.38e-11,6;UBERON:0001178,4.38e-11,6;UBERON:0000947,3.51e-08,21;UBERON:0010191,3.51e-08,21;UBERON:0004573,3.79e-08,33;UBERON:0004571,3.79e-08,33;UBERON:0007846,1.62e-07,3;UBERON:0000043,1.62e-07,3;UBERON:0007845,1.62e-07,3;UBERON:0002384,1.88e-07,371;UBERON:0004457,2.42e-07,12;UBERON:0000042,2.42e-07,12;UBERON:0001637,7.18e-07,42;UBERON:0003509,7.18e-07,42;UBERON:0004572,7.18e-07,42 | |||
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| ||
|short_description=p5@SEPT11 | |short_description=p5@SEPT11 | ||
}} | }} |
Latest revision as of 18:34, 18 September 2015
Short description: | p5@SEPT11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SEPT11_5end |
Coexpression cluster: | C4426_Ewing_Preadipocyte_Fibroblast_basal_neurofibroma_Multipotent_Adipocyte |
Association with transcript: | -57bp_to_ENST00000512333_5end |
EntrezGene: | SEPT11 |
HGNC: | 25589 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.64e-19 | 76 |
preadipocyte | 1.44e-12 | 12 |
fibroblast of tunica adventitia of artery | 2.79e-11 | 4 |
fibroblast of the aortic adventitia | 2.79e-11 | 4 |
multi fate stem cell | 5.60e-11 | 427 |
somatic stem cell | 1.34e-10 | 433 |
stem cell | 4.15e-10 | 441 |
omentum preadipocyte | 6.22e-09 | 3 |
skin fibroblast | 9.36e-09 | 23 |
preadipocyte of the breast | 1.67e-08 | 3 |
fibrocyte | 1.62e-07 | 3 |
tendon cell | 1.62e-07 | 3 |
mesenchymal cell | 2.41e-07 | 354 |
connective tissue cell | 5.83e-07 | 361 |
fat cell | 7.55e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
artery wall | 2.79e-11 | 4 |
tunica adventitia of artery | 2.79e-11 | 4 |
adventitia | 2.79e-11 | 4 |
tunica adventitia of blood vessel | 2.79e-11 | 4 |
aorta tunica adventitia | 2.79e-11 | 4 |
aorta wall | 2.79e-11 | 4 |
omentum | 4.38e-11 | 6 |
peritoneum | 4.38e-11 | 6 |
abdominal cavity | 4.38e-11 | 6 |
visceral peritoneum | 4.38e-11 | 6 |
aorta | 3.51e-08 | 21 |
aortic system | 3.51e-08 | 21 |
systemic artery | 3.79e-08 | 33 |
systemic arterial system | 3.79e-08 | 33 |
dense regular connective tissue | 1.62e-07 | 3 |
tendon | 1.62e-07 | 3 |
regular connective tissue | 1.62e-07 | 3 |
connective tissue | 1.88e-07 | 371 |
cavity lining | 2.42e-07 | 12 |
serous membrane | 2.42e-07 | 12 |
artery | 7.18e-07 | 42 |
arterial blood vessel | 7.18e-07 | 42 |
arterial system | 7.18e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 5.46e-08 | 5 |
myotonic disease | 5.46e-08 | 5 |
muscle tissue disease | 5.46e-08 | 5 |
myopathy | 5.46e-08 | 5 |
muscular disease | 5.46e-08 | 5 |
myotonic dystrophy | 5.46e-08 | 5 |