FFCP PHASE1:Hg19::chr4:909521..909534,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2580 | |EntrezGene=2580 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4113 | |HGNC=4113 | ||
|TSSclassifier=strong | |||
|UniProt=D6RC24 | |UniProt=D6RC24 | ||
|association_with_transcript=0bp_to_ENST00000511229_5end | |association_with_transcript=0bp_to_ENST00000511229_5end | ||
|cluster_id=chr4:909521..909534,- | |||
|coexpression_cluster_id=C164 | |coexpression_cluster_id=C164 | ||
|description=CAGE_peak_5_at_GAK_5end | |description=CAGE_peak_5_at_GAK_5end | ||
|id=chr4:909521..909534,- | |id=chr4:909521..909534,- | ||
|ontology_enrichment_celltype=CL:0000840!6.29e-07!5;CL:0001029!6.29e-07!5 | |ontology_enrichment_celltype=CL:0000840!6.29e-07!5;CL:0001029!6.29e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0002591;3.28e-23;1!CL:0002178;8.31e-09;3!CL:0000784;1.21e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002591,4.10e-23,1;CL:0002178,8.31e-09,3;CL:0000784,1.40e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0006298;3.28e-23;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0050619;3.28e-23;1!DOID:1357;3.28e-23;1!DOID:3493;1.48e-12;2 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,2.10e-23,1;DOID:1357,2.10e-23,1;DOID:3493,1.48e-12,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!5.90e-17!115;UBERON:0001893!6.22e-12!34;UBERON:0002791!1.10e-10!33;UBERON:0001049!2.76e-10!57;UBERON:0005068!2.76e-10!57;UBERON:0006241!2.76e-10!57;UBERON:0007135!2.76e-10!57;UBERON:0001869!2.14e-09!32;UBERON:0002780!2.31e-09!41;UBERON:0001890!2.31e-09!41;UBERON:0006240!2.31e-09!41;UBERON:0003080!4.57e-09!42;UBERON:0002020!1.05e-08!34;UBERON:0003528!1.05e-08!34;UBERON:0002616!1.57e-08!59;UBERON:0002346!2.17e-08!90;UBERON:0001017!2.61e-08!82;UBERON:0003075!5.59e-08!86;UBERON:0007284!5.59e-08!86;UBERON:0005743!1.05e-07!86;UBERON:0000153!1.55e-07!129;UBERON:0007811!1.55e-07!129;UBERON:0001950!1.72e-07!20;UBERON:0000033!1.73e-07!123;UBERON:0000955!1.76e-07!69;UBERON:0006238!1.76e-07!69 | |ontology_enrichment_uberon=UBERON:0007023!5.90e-17!115;UBERON:0001893!6.22e-12!34;UBERON:0002791!1.10e-10!33;UBERON:0001049!2.76e-10!57;UBERON:0005068!2.76e-10!57;UBERON:0006241!2.76e-10!57;UBERON:0007135!2.76e-10!57;UBERON:0001869!2.14e-09!32;UBERON:0002780!2.31e-09!41;UBERON:0001890!2.31e-09!41;UBERON:0006240!2.31e-09!41;UBERON:0003080!4.57e-09!42;UBERON:0002020!1.05e-08!34;UBERON:0003528!1.05e-08!34;UBERON:0002616!1.57e-08!59;UBERON:0002346!2.17e-08!90;UBERON:0001017!2.61e-08!82;UBERON:0003075!5.59e-08!86;UBERON:0007284!5.59e-08!86;UBERON:0005743!1.05e-07!86;UBERON:0000153!1.55e-07!129;UBERON:0007811!1.55e-07!129;UBERON:0001950!1.72e-07!20;UBERON:0000033!1.73e-07!123;UBERON:0000955!1.76e-07!69;UBERON:0006238!1.76e-07!69 | ||
|ontology_enrichment_uberon_v019=UBERON:0001736;3.28e-23;1!UBERON:0001764;3.28e-23;1!UBERON:0001825;3.28e-23;1!UBERON:0001044;9.73e-16;6!UBERON:0003293;9.73e-16;6!UBERON:0003294;9.73e-16;6!UBERON:0010047;9.73e-16;6!UBERON:0003408;9.73e-16;6!UBERON:0000167;9.73e-16;6!UBERON:0001041;5.79e-15;14!UBERON:0001829;2.59e-12;2!UBERON:0000078;2.59e-12;2!UBERON:0002012;2.59e-12;2!UBERON:0008886;2.59e-12;2!UBERON:0002346;8.61e-07;4!UBERON:0000923;8.61e-07;4!UBERON:0010316;8.61e-07;4!UBERON:0005291;8.61e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001736,1.67e-23,1;UBERON:0006298,1.67e-23,1;UBERON:0001764,2.10e-23,1;UBERON:0001825,2.10e-23,1;UBERON:0001044,7.79e-16,6;UBERON:0003293,7.79e-16,6;UBERON:0003294,7.79e-16,6;UBERON:0010047,7.79e-16,6;UBERON:0000167,7.79e-16,6;UBERON:0001829,1.85e-12,2;UBERON:0000078,2.90e-12,2;UBERON:0007497,2.90e-12,2;UBERON:0003643,2.90e-12,2;UBERON:0003504,2.90e-12,2;UBERON:0003469,2.90e-12,2;UBERON:0003496,2.90e-12,2;UBERON:0002012,2.90e-12,2;UBERON:0008886,2.90e-12,2;UBERON:0007303,2.90e-12,2;UBERON:0002061,2.90e-12,2;UBERON:0005432,2.90e-12,2;UBERON:0004363,2.90e-12,2;UBERON:0003408,6.78e-10,10;UBERON:0004145,1.30e-08,3 | |||
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| ||
|short_description=p5@GAK | |short_description=p5@GAK | ||
}} | }} |
Latest revision as of 09:08, 19 September 2015
Short description: | p5@GAK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_GAK_5end |
Coexpression cluster: | C164_signet_corpus_optic_mucinous_substantia_salivary_choriocarcinoma |
Association with transcript: | 0bp_to_ENST00000511229_5end |
EntrezGene: | GAK |
HGNC: | 4113 |
UniProt: | D6RC24 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the pulmonary artery | 4.10e-23 | 1 |
epithelial cell of stomach | 8.31e-09 | 3 |
plasmacytoid dendritic cell | 1.40e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
submandibular gland | 1.67e-23 | 1 |
submandibular gland primordium | 1.67e-23 | 1 |
maxillary sinus | 2.10e-23 | 1 |
paranasal sinus | 2.10e-23 | 1 |
saliva-secreting gland | 7.79e-16 | 6 |
gland of oral region | 7.79e-16 | 6 |
gland of foregut | 7.79e-16 | 6 |
oral gland | 7.79e-16 | 6 |
oral cavity | 7.79e-16 | 6 |
major salivary gland | 1.85e-12 | 2 |
mixed ectoderm/mesoderm/endoderm-derived structure | 2.90e-12 | 2 |
developing epithelial placode | 2.90e-12 | 2 |
respiratory system arterial blood vessel | 2.90e-12 | 2 |
respiratory system blood vessel | 2.90e-12 | 2 |
respiratory system artery | 2.90e-12 | 2 |
head blood vessel | 2.90e-12 | 2 |
pulmonary artery | 2.90e-12 | 2 |
pulmonary vascular system | 2.90e-12 | 2 |
pharyngeal vasculature | 2.90e-12 | 2 |
truncus arteriosus | 2.90e-12 | 2 |
aortic sac | 2.90e-12 | 2 |
pharyngeal arch artery | 2.90e-12 | 2 |
gland of gut | 6.78e-10 | 10 |
outflow tract | 1.30e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 2.10e-23 | 1 |
maxillary sinus cancer | 2.10e-23 | 1 |
signet ring cell adenocarcinoma | 1.48e-12 | 2 |