FFCP PHASE1:Hg19::chr5:10307933..10308038,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=134147 | |EntrezGene=134147 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25090 | |HGNC=25090 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000506821,ENST00000514202_5end | |association_with_transcript=0bp_to_ENST00000506821,ENST00000514202_5end | ||
|cluster_id=chr5:10307933..10308038,- | |||
|coexpression_cluster_id=C4444 | |coexpression_cluster_id=C4444 | ||
|description=CAGE_peak_1_at_CMBL_5end | |description=CAGE_peak_1_at_CMBL_5end | ||
|id=chr5:10307933..10308038,- | |id=chr5:10307933..10308038,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!5.71e-17!347;UBERON:0000475!2.03e-13!365;UBERON:0002100!4.80e-11!216;UBERON:0003104!5.24e-11!238;UBERON:0009142!5.24e-11!238;UBERON:0000468!7.12e-11!659;UBERON:0001007!9.84e-09!155;UBERON:0001555!9.84e-09!155;UBERON:0007026!9.84e-09!155;UBERON:0002050!2.44e-08!605;UBERON:0005423!2.44e-08!605;UBERON:0000922!2.82e-08!612;UBERON:0000923!3.72e-08!604;UBERON:0005291!3.72e-08!604;UBERON:0006598!3.72e-08!604;UBERON:0002532!3.72e-08!604;UBERON:0004119!7.56e-08!169;UBERON:0000925!7.56e-08!169;UBERON:0006595!7.56e-08!169;UBERON:0004921!7.61e-08!129;UBERON:0004185!7.61e-08!129;UBERON:0000467!1.84e-07!625;UBERON:0000119!2.03e-07!312;UBERON:0000477!2.06e-07!286;UBERON:0000480!2.26e-07!626;UBERON:0000160!2.80e-07!27;UBERON:0000483!5.24e-07!309;UBERON:0005256!7.12e-07!143;UBERON:0005177!8.32e-07!107 | |ontology_enrichment_uberon=UBERON:0000481!5.71e-17!347;UBERON:0000475!2.03e-13!365;UBERON:0002100!4.80e-11!216;UBERON:0003104!5.24e-11!238;UBERON:0009142!5.24e-11!238;UBERON:0000468!7.12e-11!659;UBERON:0001007!9.84e-09!155;UBERON:0001555!9.84e-09!155;UBERON:0007026!9.84e-09!155;UBERON:0002050!2.44e-08!605;UBERON:0005423!2.44e-08!605;UBERON:0000922!2.82e-08!612;UBERON:0000923!3.72e-08!604;UBERON:0005291!3.72e-08!604;UBERON:0006598!3.72e-08!604;UBERON:0002532!3.72e-08!604;UBERON:0004119!7.56e-08!169;UBERON:0000925!7.56e-08!169;UBERON:0006595!7.56e-08!169;UBERON:0004921!7.61e-08!129;UBERON:0004185!7.61e-08!129;UBERON:0000467!1.84e-07!625;UBERON:0000119!2.03e-07!312;UBERON:0000477!2.06e-07!286;UBERON:0000480!2.26e-07!626;UBERON:0000160!2.80e-07!27;UBERON:0000483!5.24e-07!309;UBERON:0005256!7.12e-07!143;UBERON:0005177!8.32e-07!107 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003104,7.84e-11,160;UBERON:0009142,7.84e-11,160;UBERON:0002100,3.72e-10,199;UBERON:0011216,6.15e-08,223;UBERON:0000119,3.58e-07,309;UBERON:0001007,4.13e-07,145;UBERON:0001555,4.13e-07,145;UBERON:0007026,4.13e-07,145;UBERON:0000483,9.12e-07,306 | |||
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| ||
|short_description=p1@CMBL | |short_description=p1@CMBL | ||
}} | }} |
Latest revision as of 13:41, 19 September 2015
Short description: | p1@CMBL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CMBL_5end |
Coexpression cluster: | C4444_Nucleus_small_Pericytes_Anulus_colon_skeletal_lung |
Association with transcript: | 0bp_to_ENST00000506821, ENST00000514202_5end |
EntrezGene: | CMBL |
HGNC: | 25090 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchyme | 7.84e-11 | 160 |
entire embryonic mesenchyme | 7.84e-11 | 160 |
trunk | 3.72e-10 | 199 |
organ system subdivision | 6.15e-08 | 223 |
cell layer | 3.58e-07 | 309 |
digestive system | 4.13e-07 | 145 |
digestive tract | 4.13e-07 | 145 |
primitive gut | 4.13e-07 | 145 |
epithelium | 9.12e-07 | 306 |