FFCP PHASE1:Hg19::chr5:106837881..106837888,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:106837881..106837888,- | |||
|coexpression_cluster_id=C3346 | |coexpression_cluster_id=C3346 | ||
|description=CAGE_peak_at_chr5:106837881..106837888,- | |description=CAGE_peak_at_chr5:106837881..106837888,- | ||
|id=chr5:106837881..106837888,- | |id=chr5:106837881..106837888,- | ||
|ontology_enrichment_celltype=CL:0002139!1.86e-24!24;CL:0000115!1.12e-22!35;CL:0000071!1.78e-17!18;CL:0002546!1.78e-17!18;CL:0002078!1.84e-17!44;CL:0002144!5.52e-17!3;CL:0002618!2.78e-16!3;CL:0000213!6.29e-15!57;CL:0000215!6.29e-15!57;CL:0002543!5.87e-14!6;CL:0005020!1.26e-08!6;CL:0002138!1.26e-08!6;CL:0005022!1.26e-08!6;CL:0000623!6.57e-08!3;CL:0000825!6.57e-08!3;CL:1000449!1.16e-07!16;CL:1000612!3.76e-07!7;CL:1000746!3.76e-07!7;CL:0000167!8.34e-07!1;CL:0000164!8.34e-07!1;CL:0000502!8.34e-07!1;CL:0000172!8.34e-07!1;CL:0000173!8.34e-07!1;CL:0002351!8.34e-07!1;CL:1000497!8.85e-07!18;CL:0002518!8.85e-07!18 | |ontology_enrichment_celltype=CL:0002139!1.86e-24!24;CL:0000115!1.12e-22!35;CL:0000071!1.78e-17!18;CL:0002546!1.78e-17!18;CL:0002078!1.84e-17!44;CL:0002144!5.52e-17!3;CL:0002618!2.78e-16!3;CL:0000213!6.29e-15!57;CL:0000215!6.29e-15!57;CL:0002543!5.87e-14!6;CL:0005020!1.26e-08!6;CL:0002138!1.26e-08!6;CL:0005022!1.26e-08!6;CL:0000623!6.57e-08!3;CL:0000825!6.57e-08!3;CL:1000449!1.16e-07!16;CL:1000612!3.76e-07!7;CL:1000746!3.76e-07!7;CL:0000167!8.34e-07!1;CL:0000164!8.34e-07!1;CL:0000502!8.34e-07!1;CL:0000172!8.34e-07!1;CL:0000173!8.34e-07!1;CL:0002351!8.34e-07!1;CL:1000497!8.85e-07!18;CL:0002518!8.85e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0002144;1.92e-53;3!CL:0000167;1.81e-40;1!CL:0000164;1.81e-40;1!CL:0000502;1.81e-40;1!CL:0000172;1.81e-40;1!CL:0000173;1.81e-40;1!CL:0002139;1.13e-15;24!CL:0002078;7.58e-13;45!CL:0000115;6.18e-12;36!CL:0000071;7.25e-10;18!CL:0000213;3.03e-09;58!CL:0000215;3.03e-09;58!CL:0002188;3.10e-09;5!CL:0002138;6.55e-08;6!CL:1000746;5.86e-07;7!CL:1000612;5.86e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002144,2.87e-53,3;CL:0000167,1.48e-40,1;CL:0000164,1.48e-40,1;CL:0000502,1.48e-40,1;CL:0000172,1.48e-40,1;CL:0000173,1.48e-40,1;CL:0002351,1.48e-40,1;CL:0000115,3.00e-18,36;CL:0002139,1.25e-15,24;CL:0002078,9.38e-15,45;CL:0000213,1.31e-11,58;CL:0000215,1.31e-11,58;CL:0000071,7.76e-10,18;CL:0002546,7.76e-10,18;CL:0002188,2.74e-09,5;CL:0005020,6.78e-08,6;CL:0002138,6.78e-08,6;CL:0005022,6.78e-08,6;CL:1000746,5.38e-07,7;CL:1000612,5.38e-07,7 | |||
|ontology_enrichment_development_v019=CL:0002351;1.81e-40;1!CL:0002546;7.25e-10;18!CL:0005022;6.55e-08;6 | |||
|ontology_enrichment_disease=DOID:4430!8.34e-07!1 | |ontology_enrichment_disease=DOID:4430!8.34e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:4430;1.81e-40;1!DOID:169;6.55e-08;6 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,1.48e-40,1;DOID:169,6.34e-08,6 | |||
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|ontology_enrichment_uberon_v019=UBERON:0010523;1.92e-53;3!UBERON:0001915;1.92e-53;3!UBERON:0001982;1.92e-53;3!UBERON:0004638;7.25e-10;18!UBERON:0001986;7.25e-10;18!UBERON:0004852;7.25e-10;18!UBERON:0000487;2.98e-08;22!UBERON:0006914;2.24e-07;25!UBERON:0000074;5.86e-07;7!UBERON:0001229;5.86e-07;7 | |||
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|short_description=p@chr5:106837881..106837888,- | |short_description=p@chr5:106837881..106837888,- | ||
}} | }} |
Latest revision as of 08:30, 30 July 2015
Short description: | p@chr5:106837881..106837888, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:106837881..106837888, - |
Coexpression cluster: | C3346_Endothelial_Renal_somatostatinoma_Lymphatic_Small_Fibroblast_Natural |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
capillary endothelial cell | 2.87e-53 | 3 |
peptide hormone secreting cell | 1.48e-40 | 1 |
enteroendocrine cell | 1.48e-40 | 1 |
type D enteroendocrine cell | 1.48e-40 | 1 |
somatostatin secreting cell | 1.48e-40 | 1 |
pancreatic D cell | 1.48e-40 | 1 |
progenitor cell of endocrine pancreas | 1.48e-40 | 1 |
endothelial cell | 3.00e-18 | 36 |
endothelial cell of vascular tree | 1.25e-15 | 24 |
meso-epithelial cell | 9.38e-15 | 45 |
lining cell | 1.31e-11 | 58 |
barrier cell | 1.31e-11 | 58 |
blood vessel endothelial cell | 7.76e-10 | 18 |
embryonic blood vessel endothelial progenitor cell | 7.76e-10 | 18 |
glomerular endothelial cell | 2.74e-09 | 5 |
lymphangioblast | 6.78e-08 | 6 |
endothelial cell of lymphatic vessel | 6.78e-08 | 6 |
vascular lymphangioblast | 6.78e-08 | 6 |
glomerular cell | 5.38e-07 | 7 |
kidney corpuscule cell | 5.38e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
microcirculatory vessel | 2.87e-53 | 3 |
endothelium of capillary | 2.87e-53 | 3 |
capillary | 2.87e-53 | 3 |
blood vessel endothelium | 7.76e-10 | 18 |
endothelium | 7.76e-10 | 18 |
cardiovascular system endothelium | 7.76e-10 | 18 |
simple squamous epithelium | 3.15e-08 | 22 |
squamous epithelium | 2.35e-07 | 25 |
primitive nephron | 5.38e-07 | 7 |
renal glomerulus | 5.38e-07 | 7 |
renal corpuscle | 5.38e-07 | 7 |
glomerular capsule | 5.38e-07 | 7 |
metanephric mesenchyme | 5.38e-07 | 7 |
glomerular tuft | 5.38e-07 | 7 |
S-shaped body | 5.38e-07 | 7 |
renal vesicle | 5.38e-07 | 7 |
comma-shaped body | 5.38e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 1.48e-40 | 1 |
neuroendocrine tumor | 6.34e-08 | 6 |