FFCP PHASE1:Hg19::chr6:55739244..55739256,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=406bp_to_AB527577,CU693346_5end | |association_with_transcript=406bp_to_AB527577,CU693346_5end | ||
|cluster_id=chr6:55739244..55739256,- | |||
|coexpression_cluster_id=C2864 | |coexpression_cluster_id=C2864 | ||
|description=CAGE_peak_2_at_AB527577_5end,CAGE_peak_2_at_CU693346_5end | |description=CAGE_peak_2_at_AB527577_5end,CAGE_peak_2_at_CU693346_5end | ||
|id=chr6:55739244..55739256,- | |id=chr6:55739244..55739256,- | ||
|ontology_enrichment_celltype=CL:0002150!4.13e-09!3;CL:0000861!4.13e-09!3;CL:0000594!3.22e-07!3 | |ontology_enrichment_celltype=CL:0002150!4.13e-09!3;CL:0000861!4.13e-09!3;CL:0000594!3.22e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002549;7.63e-23;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002549,6.84e-23,2 | |||
|ontology_enrichment_development_v019=UBERON:0004140;7.02e-13;1!UBERON:0000358;8.84e-13;1!UBERON:0010115;2.60e-12;1!UBERON:0004874;2.60e-12;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0050619;2.60e-12;1!DOID:1357;2.60e-12;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,2.20e-12,1;DOID:1357,2.20e-12,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.17e-16!115;UBERON:0002300!5.51e-09!3;UBERON:0001896!1.36e-07!3;UBERON:0005290!1.36e-07!3;UBERON:0010096!1.36e-07!3;UBERON:0002298!2.52e-07!8;UBERON:0005743!9.54e-07!86 | |ontology_enrichment_uberon=UBERON:0007023!3.17e-16!115;UBERON:0002300!5.51e-09!3;UBERON:0001896!1.36e-07!3;UBERON:0005290!1.36e-07!3;UBERON:0010096!1.36e-07!3;UBERON:0002298!2.52e-07!8;UBERON:0005743!9.54e-07!86 | ||
|ontology_enrichment_uberon_v019=UBERON:0005629;7.63e-23;2!UBERON:0005358;7.63e-23;2!UBERON:0001886;7.63e-23;2!UBERON:0004086;7.63e-23;2!UBERON:0005282;7.63e-23;2!UBERON:0005281;7.63e-23;2!UBERON:0002363;2.60e-12;1!UBERON:0000989;2.60e-12;1!UBERON:0002135;2.60e-12;1!UBERON:0001764;2.60e-12;1!UBERON:0008811;2.60e-12;1!UBERON:0001825;2.60e-12;1!UBERON:0005284;1.01e-09;5!UBERON:0003127;5.41e-07;2!UBERON:0000341;8.76e-07;2!UBERON:0002360;8.76e-07;2!UBERON:0002133;8.76e-07;2!UBERON:0000094;8.76e-07;2!UBERON:0010743;8.76e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005629,6.84e-23,2;UBERON:0005358,6.84e-23,2;UBERON:0001886,6.84e-23,2;UBERON:0004086,6.84e-23,2;UBERON:0005282,6.84e-23,2;UBERON:0005281,6.84e-23,2;UBERON:0000989,1.40e-12,1;UBERON:0008811,1.40e-12,1;UBERON:0006258,1.40e-12,1;UBERON:0005876,1.40e-12,1;UBERON:0004874,1.40e-12,1;UBERON:0001764,2.20e-12,1;UBERON:0001825,2.20e-12,1;UBERON:0002135,2.75e-12,1;UBERON:0002363,4.31e-12,1;UBERON:0007645,4.31e-12,1;UBERON:0007647,4.31e-12,1;UBERON:0010115,4.31e-12,1;UBERON:0005284,9.70e-10,5;UBERON:0003127,5.41e-07,2;UBERON:0002133,9.02e-07,2 | |||
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| ||
|short_description=p2@AB527577,p2@CU693346 | |short_description=p2@AB527577,p2@CU693346 | ||
}} | }} |
Latest revision as of 02:27, 31 July 2015
Short description: | p2@AB527577, p2@CU693346 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_AB527577_5end, CAGE_peak_2_at_CU693346_5end |
Coexpression cluster: | C2864_heart_lung_trachea_pons_synovial_umbilical_maxillary |
Association with transcript: | 406bp_to_AB527577, CU693346_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of choroid plexus | 6.84e-23 | 2 |
Ontology term | p-value | n |
---|---|---|
vascular plexus | 6.84e-23 | 2 |
ventricle of nervous system | 6.84e-23 | 2 |
choroid plexus | 6.84e-23 | 2 |
brain ventricle | 6.84e-23 | 2 |
ventricular system of brain | 6.84e-23 | 2 |
ventricular system of central nervous system | 6.84e-23 | 2 |
penis | 1.40e-12 | 1 |
intromittent organ | 1.40e-12 | 1 |
lateral plate mesenchyme | 1.40e-12 | 1 |
undifferentiated genital tubercle | 1.40e-12 | 1 |
somatopleure | 1.40e-12 | 1 |
maxillary sinus | 2.20e-12 | 1 |
paranasal sinus | 2.20e-12 | 1 |
mitral valve | 2.75e-12 | 1 |
dura mater | 4.31e-12 | 1 |
future meninx | 4.31e-12 | 1 |
ectomeninx | 4.31e-12 | 1 |
future dura mater | 4.31e-12 | 1 |
brain vasculature | 9.70e-10 | 5 |
open tracheal system trachea | 5.41e-07 | 2 |
atrioventricular valve | 9.02e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 2.20e-12 | 1 |
maxillary sinus cancer | 2.20e-12 | 1 |