FFCP PHASE1:Hg19::chr6:7586117..7586135,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1832 | |EntrezGene=1832 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=3052 | |HGNC=3052 | ||
|TSSclassifier=strong | |||
|UniProt=P15924 | |UniProt=P15924 | ||
|association_with_transcript=62bp_to_AF139065_5end | |association_with_transcript=62bp_to_AF139065_5end | ||
|cluster_id=chr6:7586117..7586135,+ | |||
|coexpression_cluster_id=C640 | |coexpression_cluster_id=C640 | ||
|description=CAGE_peak_9_at_DSP_5end | |description=CAGE_peak_9_at_DSP_5end | ||
|id=chr6:7586117..7586135,+ | |id=chr6:7586117..7586135,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.17e-27!254;CL:0002076!3.13e-15!43;CL:0000223!1.39e-14!59;CL:0002251!6.17e-10!21 | |ontology_enrichment_celltype=CL:0000066!1.17e-27!254;CL:0002076!3.13e-15!43;CL:0000223!1.39e-14!59;CL:0002251!6.17e-10!21 | ||
|ontology_enrichment_celltype_v019=CL:0002076;1.73e-11;42!CL:0000349;9.61e-11;19!CL:0002251;1.17e-10;20!CL:0002537;9.08e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,6.45e-17,253;CL:0002076,3.10e-15,42;CL:0000223,1.21e-13,58;CL:0000349,5.65e-11,19;CL:0002251,6.29e-11,20;CL:0002537,7.04e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000223;1.37e-07;58 | |||
|ontology_enrichment_disease=DOID:305!1.08e-18!106;DOID:0050687!7.60e-14!143;DOID:162!4.42e-07!235;DOID:14566!9.10e-07!239 | |ontology_enrichment_disease=DOID:305!1.08e-18!106;DOID:0050687!7.60e-14!143;DOID:162!4.42e-07!235;DOID:14566!9.10e-07!239 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,6.08e-10,106;DOID:0050687,1.90e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0004119!5.66e-15!169;UBERON:0000925!5.66e-15!169;UBERON:0006595!5.66e-15!169;UBERON:0001007!1.05e-10!155;UBERON:0001555!1.05e-10!155;UBERON:0007026!1.05e-10!155;UBERON:0001004!1.74e-09!72;UBERON:0005631!4.47e-09!14;UBERON:0000158!4.47e-09!14;UBERON:0000077!5.60e-09!130;UBERON:0004921!1.54e-08!129;UBERON:0004185!1.54e-08!129;UBERON:0001041!9.48e-08!98;UBERON:0004923!2.46e-07!57;UBERON:0003102!4.04e-07!95;UBERON:0000062!7.05e-07!511;UBERON:0003133!8.98e-07!48 | |ontology_enrichment_uberon=UBERON:0004119!5.66e-15!169;UBERON:0000925!5.66e-15!169;UBERON:0006595!5.66e-15!169;UBERON:0001007!1.05e-10!155;UBERON:0001555!1.05e-10!155;UBERON:0007026!1.05e-10!155;UBERON:0001004!1.74e-09!72;UBERON:0005631!4.47e-09!14;UBERON:0000158!4.47e-09!14;UBERON:0000077!5.60e-09!130;UBERON:0004921!1.54e-08!129;UBERON:0004185!1.54e-08!129;UBERON:0001041!9.48e-08!98;UBERON:0004923!2.46e-07!57;UBERON:0003102!4.04e-07!95;UBERON:0000062!7.05e-07!511;UBERON:0003133!8.98e-07!48 | ||
|ontology_enrichment_uberon_v019=UBERON:0005631;2.11e-09;10!UBERON:0000158;2.11e-09;10!UBERON:0000478;9.44e-09;24!UBERON:0000002;5.20e-07;6!UBERON:0001560;5.20e-07;6!UBERON:0000310;5.70e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,3.95e-13,14;UBERON:0000158,3.95e-13,14;UBERON:0004119,1.88e-10,160;UBERON:0000925,1.88e-10,160;UBERON:0006595,1.88e-10,160;UBERON:0000478,7.58e-09,24;UBERON:0003124,1.36e-08,7;UBERON:0004923,2.29e-08,66;UBERON:0000166,6.01e-08,22;UBERON:0005795,1.43e-07,22;UBERON:0000310,2.90e-07,10;UBERON:0001004,2.99e-07,74;UBERON:0003102,3.61e-07,99;UBERON:0000995,5.16e-07,21 | |||
|phase1_expression=3.81524596468169,2.99740733447376,0.986680828671798,11.0080628188443,1.34088328328186,1.74467704820074,0,0,0,0.245733936501509,2.09340350391728,1.31064823278103,0.263766978228454,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,1.50602959389125,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378139268656271,0.221729397462564,0.087834785693126,0.130979075497713,1.09288586487763,5.93255108455087,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.976248230192678,0,0,0,0,0,0,0,0,0,0,0.872188104285069,3.47880366186723,0.633152558322899,0.794455084879313,0,0,0,2.1349799145941,0.49333509683432,0,0,0.326923806226917,0,1.72852777344,0,0,0,0,0,0,0,0,0,0,1.18800285728205,0.247266929278557,0,0,0,0,0,0.877955241761676,0.612975591598039,0.45071417671979,0.113432183160021,1.79389635688862,0.85422955527427,1.05965950579781,3.00091096084402,0.618315175430633,2.57640540045629,0.558350568994769,0.675105328965065,0.292311015483596,4.29137416214995,1.10459878370759,0.484938170456436,3.55009592516614,1.0075209822764,0.339121184620975,3.09217365061275,4.90943017063502,2.58124135850103,0.365921118388786,0.530119073285941,0.929551542956147,1.0366105501537,1.51392510525377,0.36497735907583,0,1.28648187638577,0,0,0.721879481669586,1.30137480043828,0.842923450390509,0.964044119533928,2.53676137284506,1.08939722046203,1.42362371466658,1.34831308160164,1.37355025587742,1.53898862778556,0,0,0,0,7.60530208930985,1.96565443335525,0.590789906681404,0,2.45976877086227,0.171567810298526,9.65802511595905,1.1240175325762,5.83068039987459,5.09236448371913,0,0,0,0.579652024875384,0.469634776943287,0.288732895522148,0,0.761016608938393,3.1608175918371,1.71697232418975,0,0,0,0.93733833986777,2.85569617938061,1.98485136139341,4.20925056703387,4.65014301622339,0.383382679165211,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0.1466765716419,0.258543431515556,0,0,1.86156681609409,2.08014873822732,0,0,0,0,0,0,0.325736184293735,0.355391948742546,0,0,0,0.499864955910285,0,0,0,8.14724508671381,5.7430967917057,0,2.46128221334885,0,0.895304816199478,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,1.87173775377726,3.39015078714607,2.36553622550902,0.702848489956279,0,0,0,5.97803038681893,0.368738337083406,0,0.195801157462741,0,0,0,0,3.63753085735511,6.65741758041988,1.81434175997808,3.47350930946288,7.21271274453894,2.80660094433074,0.768834895534206,2.04682899626681,4.98647155545183,1.48418066444991,0.616838775210622,0.887808626565635,0,0.519254429183621,0.232420756919918,2.1754700926492,6.41620704970512,7.73480307061529,0,0,0,0.451199612907412,2.0794141018192,0,0,0.527758144464379,0,0,0.431831832204279,0,0,0,0.254876273045038,0.831076008928724,0.223874754722178,0,0,0.256450125116389,0,0,0.824328093181778,0,0,0.574265537996172,3.25030123018261,0,0.096670718292122,0,0,0,0.107420244868274,0.145016693914229,0,0.267096106940212,7.10725136052206,3.2672311452068,3.82838137483752,4.75441570021085,2.78907329578371,1.88887408098384,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0.487426979262569,0,0,0,0,0,0.66343897524122,0.876901770507525,0,0,0.202910376962704,0,0,0,0.0982490410131212,0,0,0.211107635297664,0,0,0,0.288666338176536,1.34060455107157,0,0.470719003883896,0.86101074534246,3.36942951335251,5.76459199597678,2.98640420269047,0,0,0,0,0,0,0,0,2.99107399156925,0,3.18552280775341,0,0,0,0.478278818186467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.748562161632879,0,0,0,0,19.8157922332283,2.37571744666111,19.0439635301524,0,0,0,0,0,0,0,7.306049687774,0.613612095012929,0,3.42143546427988,0.718946809178615,0.716084698702437,0,0.0986434056369336,0,1.11136990144637,0,0.278304294485554,1.99613798001194,1.82299432759663,0,0,0.910347586283997,0.254253650292766,4.72775363535873,0,0,0.173624994933292,0,0,0,0,0,0.219385397153973,1.19832309870889,4.74040730547251,3.00106008164809,0,0.922255617552241,9.51431030743585,8.80043712568265,13.0790475490087,1.4655614944298,42.1097473054721,0,0,0,0,0,0,0,0,4.00896322603251,1.14262965711403,1.97894300007517,0.432777279484182,0,0.973033209536731,1.22206028986725,0,0,0,0,0,0,0,0.586993856796269,0.242780379534093,0.789168805698781,1.20990716048664,0.30607276163049,0.252746318513952,0.150323419414493,1.03688191397247,0,0.330991955875499,0,0,0.284609546029793,0,6.24815058006471,2.05784034570193,1.04471047896483,0.34945333648406,0,0.870806981601766,0.219267951258557,0.328461828212837,5.72235197281675,0,0.225980740780532,0.137041924646751,0,0,0.977756913674015,0.240476460754601,0,2.99714414373195,2.16135625731159,0.343609788497747,1.02956998717179,0.720273989940749,0.124252535565433,10.370537523139,0.135904206073614,0.209205692624666,0,0,0,0.136905378891993,0,0.859530882839914,0,0.279282401272254,1.3749625440701,0.717873024576814,7.18844401796368,3.43380838509257,0.669514372325618,0.53746777989381,1.44119953416961,0,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| ||
|short_description=p9@DSP | |short_description=p9@DSP | ||
}} | }} |
Latest revision as of 20:13, 19 September 2015
Short description: | p9@DSP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_DSP_5end |
Coexpression cluster: | C640_amniotic_salivary_chorionic_Keratinocyte_Urothelial_Prostate_Mammary |
Association with transcript: | 62bp_to_AF139065_5end |
EntrezGene: | DSP |
HGNC: | 3052 |
UniProt: | P15924 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 6.45e-17 | 253 |
endo-epithelial cell | 3.10e-15 | 42 |
endodermal cell | 1.21e-13 | 58 |
extraembryonic cell | 5.65e-11 | 19 |
epithelial cell of alimentary canal | 6.29e-11 | 20 |
amnion mesenchymal stem cell | 7.04e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 3.95e-13 | 14 |
membranous layer | 3.95e-13 | 14 |
endoderm-derived structure | 1.88e-10 | 160 |
endoderm | 1.88e-10 | 160 |
presumptive endoderm | 1.88e-10 | 160 |
extraembryonic structure | 7.58e-09 | 24 |
chorion | 1.36e-08 | 7 |
organ component layer | 2.29e-08 | 66 |
oral opening | 6.01e-08 | 22 |
embryonic uterus | 1.43e-07 | 22 |
breast | 2.90e-07 | 10 |
respiratory system | 2.99e-07 | 74 |
surface structure | 3.61e-07 | 99 |
uterus | 5.16e-07 | 21 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 6.08e-10 | 106 |
cell type cancer | 1.90e-07 | 143 |