FFCP PHASE1:Hg19::chr19:45228436..45228453,-: Difference between revisions
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|id=chr19:45228436..45228453,-
|short_description=p@chr19:45228436..45228453,-
|description=CAGE_peak_at_chr19:45228436..45228453,-
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:45228436..45228453,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_at_chr19:45228436..45228453,- | |||
|id=chr19:45228436..45228453,- | |||
|ontology_enrichment_celltype=CL:0000181!3.95e-13!12;CL:0000417!3.95e-13!12;CL:0000668!3.95e-13!12;CL:0000414!3.95e-13!12;CL:0000412!3.95e-13!12;CL:0000182!3.95e-13!12;CL:0000990!1.35e-08!8;CL:0000453!7.15e-08!5;CL:0000451!7.20e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000453;8.01e-25;5!CL:0000182;3.20e-18;12!CL:0000990;4.33e-14;8!CL:0000451;1.23e-11;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000453,8.01e-25,5;CL:0000182,3.57e-18,12;CL:0000990,4.33e-14,8;CL:0000451,1.23e-11,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!1.96e-12!106;DOID:0050687!4.27e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:5662;2.25e-14;1 | |||
|ontology_enrichment_disease_v019_2=DOID:5662,3.15e-14,1 | |||
|ontology_enrichment_uberon=UBERON:0004921!1.30e-20!129;UBERON:0004185!1.30e-20!129;UBERON:0001007!4.99e-19!155;UBERON:0001555!4.99e-19!155;UBERON:0007026!4.99e-19!155;UBERON:0004119!3.42e-18!169;UBERON:0000925!3.42e-18!169;UBERON:0006595!3.42e-18!169;UBERON:0005409!1.50e-14!35;UBERON:0001737!2.33e-14!9;UBERON:0000077!1.31e-13!130;UBERON:0001041!4.69e-13!98;UBERON:0005057!5.98e-13!26;UBERON:0005172!9.14e-12!55;UBERON:0005173!9.14e-12!55;UBERON:0001557!2.81e-11!19;UBERON:0000949!1.92e-10!45;UBERON:0003929!4.07e-10!54;UBERON:0000160!4.39e-10!27;UBERON:0002368!4.61e-10!35;UBERON:0002417!4.66e-10!61;UBERON:0000916!4.66e-10!61;UBERON:0009497!7.19e-10!25;UBERON:0000015!7.19e-10!25;UBERON:0002423!7.19e-10!25;UBERON:0006235!7.19e-10!25;UBERON:0004161!7.19e-10!25;UBERON:0002107!1.40e-09!19;UBERON:0006925!1.40e-09!19;UBERON:0008836!1.40e-09!19;UBERON:0009854!2.74e-09!23;UBERON:0002405!9.08e-09!115;UBERON:0001155!2.41e-08!9;UBERON:0008835!5.72e-08!22;UBERON:0003894!5.72e-08!22;UBERON:0009856!6.36e-08!26;UBERON:0005177!3.19e-07!107;UBERON:0005911!3.44e-07!82;UBERON:0002530!5.91e-07!59;UBERON:0002106!6.14e-07!3;UBERON:0004854!6.14e-07!3;UBERON:0009034!6.14e-07!3;UBERON:0002095!6.14e-07!3;UBERON:0004782!6.14e-07!3;UBERON:0003281!6.14e-07!3;UBERON:0009664!6.14e-07!3;UBERON:0002296!6.14e-07!3;UBERON:0005602!6.14e-07!3;UBERON:0001179!6.14e-07!3;UBERON:0006293!6.14e-07!3;UBERON:0007499!9.37e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.19e-17;19!UBERON:0006925;1.19e-17;19!UBERON:0002423;2.04e-13;25!UBERON:0002365;3.55e-11;31!UBERON:0002330;3.55e-11;31!UBERON:0002368;2.15e-09;33!UBERON:0000949;6.31e-07;43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.30e-17,19;UBERON:0006925,1.30e-17,19;UBERON:0008836,1.30e-17,19;UBERON:0008835,3.25e-15,22;UBERON:0003894,3.25e-15,22;UBERON:0009854,1.49e-14,23;UBERON:0007499,2.18e-13,25;UBERON:0009497,2.18e-13,25;UBERON:0000015,2.18e-13,25;UBERON:0002423,2.18e-13,25;UBERON:0006235,2.18e-13,25;UBERON:0004161,2.18e-13,25;UBERON:0009856,7.13e-13,26;UBERON:0002365,8.60e-11,31;UBERON:0002330,8.60e-11,31;UBERON:0002368,1.49e-09,35;UBERON:0000949,2.07e-07,45 | |||
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| ||
|short_description=p@chr19:45228436..45228453,- | |||
}} | }} |
Latest revision as of 14:41, 27 July 2015
Short description: | p@chr19:45228436..45228453, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:45228436..45228453, - |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 8.01e-25 | 5 |
hepatocyte | 3.57e-18 | 12 |
conventional dendritic cell | 4.33e-14 | 8 |
dendritic cell | 1.23e-11 | 10 |
Ontology term | p-value | n |
---|---|---|
liver | 1.30e-17 | 19 |
digestive gland | 1.30e-17 | 19 |
liver bud | 1.30e-17 | 19 |
hepatic diverticulum | 3.25e-15 | 22 |
liver primordium | 3.25e-15 | 22 |
digestive tract diverticulum | 1.49e-14 | 23 |
epithelial sac | 2.18e-13 | 25 |
epithelium of foregut-midgut junction | 2.18e-13 | 25 |
anatomical boundary | 2.18e-13 | 25 |
hepatobiliary system | 2.18e-13 | 25 |
foregut-midgut junction | 2.18e-13 | 25 |
septum transversum | 2.18e-13 | 25 |
sac | 7.13e-13 | 26 |
exocrine gland | 8.60e-11 | 31 |
exocrine system | 8.60e-11 | 31 |
endocrine gland | 1.49e-09 | 35 |
endocrine system | 2.07e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
pleomorphic carcinoma | 3.15e-14 | 1 |