FFCP PHASE1:Hg19::chr7:93690403..93690432,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-20bp_to_ENST00000438538_5end | |association_with_transcript=-20bp_to_ENST00000438538_5end | ||
|cluster_id=chr7:93690403..93690432,+ | |||
|coexpression_cluster_id=C2908 | |coexpression_cluster_id=C2908 | ||
|description=CAGE_peak_2_at_ENST00000438538_5end | |description=CAGE_peak_2_at_ENST00000438538_5end | ||
|id=chr7:93690403..93690432,+ | |id=chr7:93690403..93690432,+ | ||
|ontology_enrichment_celltype=CL:0000048!4.29e-15!430;CL:0000723!1.86e-14!436;CL:0002057!2.59e-14!42;CL:0000034!1.22e-13!444;CL:0000860!7.57e-13!45;CL:0000680!2.70e-11!57;CL:0000056!2.70e-11!57;CL:0000355!2.70e-11!57;CL:0002371!2.14e-10!591;CL:0000187!2.44e-10!54;CL:0000144!7.70e-10!625;CL:0000183!9.96e-10!59;CL:0000548!2.35e-09!679;CL:0000004!2.35e-09!679;CL:0000255!2.35e-09!679;CL:0000012!3.81e-09!682;CL:0002009!6.26e-09!65;CL:0002194!1.12e-08!63;CL:0000576!1.12e-08!63;CL:0000040!1.12e-08!63;CL:0000559!1.12e-08!63;CL:0000393!1.39e-08!60;CL:0000211!1.39e-08!60;CL:0000055!6.01e-08!180;CL:0000192!1.38e-07!42;CL:0000514!1.38e-07!42;CL:0000557!1.45e-07!71;CL:0000134!1.69e-07!358;CL:0000839!4.08e-07!70;CL:0002320!5.70e-07!365;CL:0000359!5.81e-07!32;CL:0000219!5.88e-07!390;CL:0000003!6.01e-07!722 | |ontology_enrichment_celltype=CL:0000048!4.29e-15!430;CL:0000723!1.86e-14!436;CL:0002057!2.59e-14!42;CL:0000034!1.22e-13!444;CL:0000860!7.57e-13!45;CL:0000680!2.70e-11!57;CL:0000056!2.70e-11!57;CL:0000355!2.70e-11!57;CL:0002371!2.14e-10!591;CL:0000187!2.44e-10!54;CL:0000144!7.70e-10!625;CL:0000183!9.96e-10!59;CL:0000548!2.35e-09!679;CL:0000004!2.35e-09!679;CL:0000255!2.35e-09!679;CL:0000012!3.81e-09!682;CL:0002009!6.26e-09!65;CL:0002194!1.12e-08!63;CL:0000576!1.12e-08!63;CL:0000040!1.12e-08!63;CL:0000559!1.12e-08!63;CL:0000393!1.39e-08!60;CL:0000211!1.39e-08!60;CL:0000055!6.01e-08!180;CL:0000192!1.38e-07!42;CL:0000514!1.38e-07!42;CL:0000557!1.45e-07!71;CL:0000134!1.69e-07!358;CL:0000839!4.08e-07!70;CL:0002320!5.70e-07!365;CL:0000359!5.81e-07!32;CL:0000219!5.88e-07!390;CL:0000003!6.01e-07!722 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.41e-10;33!CL:0002057;3.41e-10;33!CL:0000473;4.62e-08;39!CL:0000234;4.62e-08;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,9.32e-09,42;CL:0002057,9.32e-09,42;CL:0000473,2.35e-07,48;CL:0000234,2.35e-07,48 | |||
|ontology_enrichment_development_v019=CL:0002057;2.49e-07;42 | |||
|ontology_enrichment_disease=DOID:2394!2.02e-14!14;DOID:120!2.09e-08!27;DOID:193!1.51e-07!29 | |ontology_enrichment_disease=DOID:2394!2.02e-14!14;DOID:120!2.09e-08!27;DOID:193!1.51e-07!29 | ||
|ontology_enrichment_disease_v019=DOID:2394;4.23e-28;14!DOID:120;4.22e-19;27!DOID:193;1.45e-17;29!DOID:0060072;2.80e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,6.08e-28,14;DOID:120,5.27e-19,27;DOID:193,1.78e-17,29;DOID:0060072,1.90e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0002204!9.87e-13!167;UBERON:0001134!4.95e-10!61;UBERON:0002036!4.95e-10!61;UBERON:0003082!4.95e-10!61;UBERON:0002385!1.82e-09!63;UBERON:0001015!1.82e-09!63;UBERON:0000383!1.82e-09!63;UBERON:0004290!2.61e-09!70;UBERON:0000992!1.34e-08!13;UBERON:0002119!1.92e-07!4;UBERON:0004531!1.92e-07!4;UBERON:0000914!3.33e-07!83;UBERON:0002329!3.33e-07!83;UBERON:0003077!3.33e-07!83;UBERON:0003059!3.33e-07!83;UBERON:0007282!3.33e-07!83;UBERON:0009618!3.33e-07!83;UBERON:0007285!3.33e-07!83;UBERON:0002384!6.55e-07!375;UBERON:0000486!8.19e-07!82 | |ontology_enrichment_uberon=UBERON:0002204!9.87e-13!167;UBERON:0001134!4.95e-10!61;UBERON:0002036!4.95e-10!61;UBERON:0003082!4.95e-10!61;UBERON:0002385!1.82e-09!63;UBERON:0001015!1.82e-09!63;UBERON:0000383!1.82e-09!63;UBERON:0004290!2.61e-09!70;UBERON:0000992!1.34e-08!13;UBERON:0002119!1.92e-07!4;UBERON:0004531!1.92e-07!4;UBERON:0000914!3.33e-07!83;UBERON:0002329!3.33e-07!83;UBERON:0003077!3.33e-07!83;UBERON:0003059!3.33e-07!83;UBERON:0007282!3.33e-07!83;UBERON:0009618!3.33e-07!83;UBERON:0007285!3.33e-07!83;UBERON:0002384!6.55e-07!375;UBERON:0000486!8.19e-07!82 | ||
|ontology_enrichment_uberon_v019=UBERON:0000992;2.81e-16;13!UBERON:0002119;5.22e-15;4!UBERON:0003134;8.36e-14;33!UBERON:0000991;7.07e-12;21!UBERON:0002118;2.68e-11;5!UBERON:0003100;6.00e-10;41!UBERON:0000474;6.56e-10;37!UBERON:0003133;1.03e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000992,3.39e-16,13;UBERON:0002119,5.82e-15,4;UBERON:0003134,4.76e-13,37;UBERON:0000474,4.76e-13,37;UBERON:0000991,7.28e-12,21;UBERON:0009196,7.28e-12,21;UBERON:0009117,7.28e-12,21;UBERON:0005564,7.28e-12,21;UBERON:0003100,1.76e-11,41;UBERON:0004176,3.03e-11,22;UBERON:0002118,3.16e-11,5;UBERON:0003133,6.17e-11,48;UBERON:0005156,2.65e-08,59;UBERON:0000990,2.65e-08,59 | |||
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|short_description=p2@ENST00000438538 | |short_description=p2@ENST00000438538 | ||
}} | }} |
Latest revision as of 12:40, 31 July 2015
Short description: | p2@ENST00000438538 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000438538_5end |
Coexpression cluster: | C2908_squamous_fibrous_large_mesenchymal_giant_Renal_serous |
Association with transcript: | -20bp_to_ENST00000438538_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 9.32e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.32e-09 | 42 |
defensive cell | 2.35e-07 | 48 |
phagocyte | 2.35e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
female gonad | 3.39e-16 | 13 |
left ovary | 5.82e-15 | 4 |
female reproductive organ | 4.76e-13 | 37 |
female reproductive system | 4.76e-13 | 37 |
gonad | 7.28e-12 | 21 |
indifferent external genitalia | 7.28e-12 | 21 |
indifferent gonad | 7.28e-12 | 21 |
gonad primordium | 7.28e-12 | 21 |
female organism | 1.76e-11 | 41 |
external genitalia | 3.03e-11 | 22 |
right ovary | 3.16e-11 | 5 |
reproductive organ | 6.17e-11 | 48 |
reproductive structure | 2.65e-08 | 59 |
reproductive system | 2.65e-08 | 59 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 6.08e-28 | 14 |
female reproductive organ cancer | 5.27e-19 | 27 |
reproductive organ cancer | 1.78e-17 | 29 |
benign neoplasm | 1.90e-08 | 4 |