FFCP PHASE1:Hg19::chr19:45908286..45908291,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:45908286..45908291,-
|short_description=p3@PPP1R13L
|description=CAGE_peak_3_at_PPP1R13L_5end
|association_with_transcript=20bp_to_ENST00000360957,NM_0066...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10848 | |EntrezGene=10848 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18838 | |HGNC=18838 | ||
|TSSclassifier=strong | |||
|UniProt=Q8WUF5 | |UniProt=Q8WUF5 | ||
|association_with_transcript=20bp_to_ENST00000360957,NM_006663,uc002pbn.2_5end | |||
|cluster_id=chr19:45908286..45908291,- | |||
|coexpression_cluster_id=C3802 | |||
|description=CAGE_peak_3_at_PPP1R13L_5end | |||
|id=chr19:45908286..45908291,- | |||
|ontology_enrichment_celltype=CL:0000066!4.49e-31!254;CL:0002076!4.81e-15!43;CL:0000223!2.61e-11!59;CL:0000076!1.17e-10!62;CL:0002251!2.65e-08!21;CL:0002368!6.16e-08!13;CL:0000220!7.13e-07!246 | |||
|ontology_enrichment_celltype_v019=CL:0002368;2.14e-17;13!CL:0002076;9.53e-17;42!CL:0002159;1.36e-13;14!CL:0000244;3.09e-13;4!CL:0000731;3.09e-13;4!CL:0000622;7.46e-11;5!CL:0002251;1.09e-10;20!CL:0002328;4.75e-10;3!CL:0000154;4.92e-09;6!CL:0000362;6.33e-09;9!CL:0000240;1.88e-08;6!CL:0000311;1.88e-08;6!CL:0000079;1.88e-08;6!CL:0000237;1.88e-08;6!CL:0002202;2.31e-08;9!CL:0002632;2.31e-08;9!CL:0000317;6.77e-08;2!CL:1000448;6.77e-08;2!CL:0002308;6.77e-08;2!CL:0002140;6.77e-08;2!CL:0000575;8.36e-08;2!CL:0002327;1.26e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,1.72e-21,42;CL:0002368,1.24e-17,13;CL:0000223,6.69e-16,58;CL:0000066,1.34e-15,253;CL:0002159,1.92e-13,14;CL:0000244,2.05e-13,4;CL:0000731,2.05e-13,4;CL:0000622,6.08e-11,5;CL:0002251,1.02e-10,20;CL:0002328,3.86e-10,3;CL:0000154,4.15e-09,6;CL:0000362,6.81e-09,9;CL:0000076,8.26e-09,63;CL:0002202,2.23e-08,9;CL:0002632,2.23e-08,9;CL:0000240,2.32e-08,6;CL:0000311,2.32e-08,6;CL:0000079,2.32e-08,6;CL:0000237,2.32e-08,6;CL:0000036,2.32e-08,6;CL:0000357,2.32e-08,6;CL:0000114,2.32e-08,6;CL:0000317,6.07e-08,2;CL:1000448,6.07e-08,2;CL:0002308,6.07e-08,2;CL:0002140,6.07e-08,2;CL:0002327,8.37e-08,4;CL:0000575,8.40e-08,2 | |||
|ontology_enrichment_development_v019=CL:0000223;1.65e-08;58!CL:0000357;1.88e-08;6!CL:0000114;1.88e-08;6 | |||
|ontology_enrichment_disease=DOID:305!2.26e-12!106;DOID:0050687!6.66e-11!143;DOID:1749!6.08e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.33e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.35e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.26e-12!169;UBERON:0000925!1.26e-12!169;UBERON:0006595!1.26e-12!169;UBERON:0001004!1.52e-12!72;UBERON:0000161!3.35e-09!35;UBERON:0000166!6.25e-09!21;UBERON:0000065!1.99e-08!53;UBERON:0001007!4.58e-08!155;UBERON:0001555!4.58e-08!155;UBERON:0007026!4.58e-08!155;UBERON:0000464!4.81e-07!104;UBERON:0000165!8.62e-07!28;UBERON:0000930!8.62e-07!28 | |||
|ontology_enrichment_uberon_v019=UBERON:0000365;1.38e-10;5!UBERON:0004815;4.75e-10;3!UBERON:0002031;4.75e-10;3!UBERON:0000486;5.56e-09;12!UBERON:0005910;8.16e-09;6!UBERON:0002419;6.77e-08;2!UBERON:0007771;6.77e-08;2!UBERON:0003297;6.77e-08;2!UBERON:0001821;6.77e-08;2!UBERON:0003487;6.77e-08;2!UBERON:0001820;6.77e-08;2!UBERON:0001911;1.26e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,9.99e-11,5;UBERON:0004815,3.86e-10,3;UBERON:0002031,3.86e-10,3;UBERON:0005910,6.25e-09,6;UBERON:0004119,1.89e-08,160;UBERON:0000925,1.89e-08,160;UBERON:0006595,1.89e-08,160;UBERON:0002419,6.07e-08,2;UBERON:0007771,6.07e-08,2;UBERON:0003297,6.07e-08,2;UBERON:0001821,6.07e-08,2;UBERON:0003487,6.07e-08,2;UBERON:0001820,6.07e-08,2;UBERON:0005089,6.07e-08,2;UBERON:0005088,6.07e-08,2;UBERON:0001911,8.37e-08,4;UBERON:0005333,8.37e-08,4;UBERON:0008425,8.37e-08,4;UBERON:0005311,8.37e-08,4;UBERON:0001004,8.80e-08,74 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0.140954404095971,0,0,0,0,0,0,0.737201809504527,2.79120467188971,1.09220686065086,1.84636884759917,0,0,0,0,0,0,0,0.408001382488506,0,0,0,0,0,0,0,0,0,0,1.83884244895785,3.614471025339,2.21852406100073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94653948121054,0,0,0.087834785693126,0,3.64295288292542,3.33705998505986,0,0,0,0,0,0,0.596287222100115,0.860234595106124,1.04142150482278,0,0,0,0.835979866147242,0.516833518338658,0.35576626268671,0.66944122552934,1.20848795132744,0,0,0.735326160691737,0,0.17859945656816,0,0,0,0,0.183201743930407,0,0,2.61656431285521,1.49091585508596,0.12663051166458,0,0,0,0,0,0,0,0.269421344139376,0,0,0,0,0,0,0,0.117434498643765,0,0.140450806702248,0,0.122834317311768,0.103325781175765,0,0.247266929278557,0,0,0,0,0,0,0,0.150238058906597,0,0.179389635688862,0,0.211931901159562,0,0.103052529238439,0.257640540045629,0,0,0.487185025805993,0.504867548488229,0,0,0,0.201504196455281,0,0.57978255948989,1.36373060295417,3.15485054927904,0,0,0.116193942869518,0.310983165046111,0,0.36497735907583,0,0.643240938192885,0,0,0,0.236613600079688,0.505754070234305,0.241011029883482,0.220587945464788,0.217879444092406,0.71181185733329,0.134831308160164,0.392442930250692,0,0,0,0,0,0,0,0,0,0.245976877086227,0.343135620597051,2.52425656439839,2.24803506515239,2.21163739305588,1.29623823221941,0,0,0,0,0,0.144366447761074,0.462985512576611,0.380508304469197,0.790204397959275,0,0,0,0,0.93733833986777,1.00789276919316,0.425325291727159,1.88072897675981,0.871901815541886,2.68367875415648,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0.958499421966331,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.356857977594324,0.473107245101804,0.117141414992713,0,0,1.03473071292505,0,0.184369168541703,0,0,0,0,0,0,0.303127571446259,0,0.30239029332968,0,1.38115775959256,0,0.384417447767103,0,0.64341568457443,0,0,0,0,0,0,0.241718899183244,2.80709058424599,0.368323955743585,0,0,0,0.451199612907412,0.462092022626489,0,0,0.422206515571503,0,0,0.215915916102139,0,0.270946437543853,0.501689773854853,0,0,0,0,0,0.256450125116389,0.328014645699706,0,0.309123034943167,0.183138929636687,0,9.18824860793876,3.90036147621913,0,0,0,0,0,0,0,0,0,1.98341898433174,1.72971060628596,2.80747967488085,2.023155617111,0.464845549297286,0.62962469366128,0,0,1.06461206063404,0,0.55597265731176,0.143124886741991,0,0,0,0.255897791311334,0,0,0,0,0,0,0.202182481573316,0,0.421258456238981,0.48763373908959,0.243713489631284,1.05650146756755,0,0,0,0,0,0.438450885253763,0,0,1.01455188481352,0,0.281695602532241,0,0.0982490410131212,0.35667105148125,0,0,0,0,0,1.53955380360819,2.01090682660736,0,0.470719003883896,5.16606447205476,8.42357378338128,1.7737206141467,2.52695740227655,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0,0.23874448473769,0,1.53580351049616,0,0,0.333926115068718,0,0,0,0,0,0.511343412510774,0,0,0.898683511473268,0,0,0.197286811273867,0,0,0,0.0927680981618513,0,0.7812832832557,3.23601999985924,0,0.910347586283997,0.762760950878299,0.236387681767936,0,0,0,0,0,0,0,0,0,0.32681539055697,1.53366118706464,0.461701551022782,0.91153644677601,0.46112780877612,0.718061155278177,1.73835795075213,0.31900115973192,0.549585560411174,1.06606955203727,0,0,0,0,0,0,0,0.158936578980379,0.210998064528027,0.163232808159148,0.141353071433941,0,0,0,0,0,0,0,0.067401132980677,0,0,0,1.56531695145672,0,0,0,0,0.063186579628488,0,0,1.32930774541437,0,0.627865836814451,0,0,0,0.694238953340524,3.62571870433197,2.17648016451006,0.34945333648406,0.171986032471617,0.0967563312890851,0.146178634172371,0.0821154570532092,1.06687918137261,0,0,0.274083849293502,0.19871461170299,0,0.195551382734803,0.721429382263803,0,0,0.288180834308212,0,0,0.432164393964449,0.248505071130865,2.12124631155116,0.543616824294456,0.209205692624666,0,0,0,0.136905378891993,0,0.429765441419957,0,0.837847203816763,0.687481272035051,0,0.998395002494955,0.858452096273142,2.00854311697685,0,0.720599767084807,0,0,0,0,0.0984274815147488,0,0,0.136203406111576,0.482259445395058,0.275078873194468,0,0,2.32140586367385,0,0.670869375198532,0.236417121897595,0.104909176269996,0.316801009558219,0,2.30298236783334,0,0,0.25426853765475,0,0,0,2.39460383124975,0,0,0,0.146552233678082,0,0,0.13223260174269,0.171086837884329,0,0.320362237703084,0.157204305099666,0,0,0,0,3.83004754662109,0,0,0,0,0,0,0.122026264901963,0,0,0.110929051536852,0.0620964029413835,0.415045904808692,0.124980407962107,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0.477890301491107,0,0.155262956876259,0,0.53168342911599,0,0.751288044986092,0,0,0.363697318405119,0.107410557042488,0.464033759878494,0.796191777397232,0,0.343395705182793,0,0,0.57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| 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| ||
|short_description=p3@PPP1R13L | |||
}} | }} |
Latest revision as of 17:01, 18 September 2015
Short description: | p3@PPP1R13L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PPP1R13L_5end |
Coexpression cluster: | C3802_Sebocyte_Urothelial_Corneal_Mammary_large_salivary_Bronchial |
Association with transcript: | 20bp_to_ENST00000360957, NM_006663, uc002pbn.2_5end |
EntrezGene: | PPP1R13L |
HGNC: | 18838 |
UniProt: | Q8WUF5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
urothelium | 9.99e-11 | 5 |
lower respiratory tract epithelium | 3.86e-10 | 3 |
epithelium of bronchus | 3.86e-10 | 3 |
transitional epithelium | 6.25e-09 | 6 |
endoderm-derived structure | 1.89e-08 | 160 |
endoderm | 1.89e-08 | 160 |
presumptive endoderm | 1.89e-08 | 160 |
skin gland | 6.07e-08 | 2 |
epidermis gland | 6.07e-08 | 2 |
gland of integumental system | 6.07e-08 | 2 |
sebaceous gland | 6.07e-08 | 2 |
skin sebaceous gland | 6.07e-08 | 2 |
sweat gland | 6.07e-08 | 2 |
sweat gland placode | 6.07e-08 | 2 |
sebaceous gland placode | 6.07e-08 | 2 |
mammary gland | 8.37e-08 | 4 |
mammary bud | 8.37e-08 | 4 |
mammary ridge | 8.37e-08 | 4 |
mammary placode | 8.37e-08 | 4 |
respiratory system | 8.80e-08 | 74 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.35e-07 | 14 |