FFCP PHASE1:Hg19::chr9:37027670..37027709,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:37027670..37027709,- | |||
|coexpression_cluster_id=C857 | |coexpression_cluster_id=C857 | ||
|description=CAGE_peak_at_chr9:37027670..37027709,- | |description=CAGE_peak_at_chr9:37027670..37027709,- | ||
|id=chr9:37027670..37027709,- | |id=chr9:37027670..37027709,- | ||
|ontology_enrichment_celltype=CL:0000945!7.75e-40!24;CL:0000826!7.75e-40!24;CL:0000236!3.45e-26!14;CL:0000542!2.80e-18!53;CL:0000051!2.80e-18!53;CL:0000838!4.04e-17!52;CL:0002087!4.25e-09!119;CL:0000738!1.71e-07!140;CL:0000817!5.67e-07!3 | |ontology_enrichment_celltype=CL:0000945!7.75e-40!24;CL:0000826!7.75e-40!24;CL:0000236!3.45e-26!14;CL:0000542!2.80e-18!53;CL:0000051!2.80e-18!53;CL:0000838!4.04e-17!52;CL:0002087!4.25e-09!119;CL:0000738!1.71e-07!140;CL:0000817!5.67e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000945;7.23e-74;24!CL:0000236;1.38e-44;13!CL:0000542;9.39e-23;53!CL:0000123;3.32e-08;2!CL:0000242;3.32e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,7.49e-74,24;CL:0000826,7.49e-74,24;CL:0000236,1.07e-47,14;CL:0000542,8.72e-36,53;CL:0000051,8.72e-36,53;CL:0000838,1.57e-33,52;CL:0002087,3.66e-15,115;CL:0000738,8.58e-12,136;CL:0000817,1.12e-11,3;CL:0002031,8.28e-11,120;CL:0000037,2.52e-08,168;CL:0000785,3.20e-08,2;CL:0000955,3.20e-08,2;CL:0000818,3.20e-08,2;CL:0000954,3.20e-08,2;CL:0000816,3.20e-08,2;CL:0000242,3.32e-08,2;CL:0000988,1.38e-07,177;CL:0002032,2.11e-07,161;CL:0000837,2.11e-07,161 | |||
|ontology_enrichment_development_v019=CL:0000051;9.39e-23;53!CL:0000954;3.26e-08;2!UBERON:0004872;9.02e-08;7 | |||
|ontology_enrichment_disease=DOID:0060058!5.09e-09!10 | |ontology_enrichment_disease=DOID:0060058!5.09e-09!10 | ||
|ontology_enrichment_disease_v019=DOID:0060058;1.44e-12;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,1.43e-12,10 | |||
|ontology_enrichment_uberon=UBERON:0000178!4.34e-14!15;UBERON:0000179!4.34e-14!15;UBERON:0000463!4.34e-14!15;UBERON:0007023!7.42e-12!115 | |ontology_enrichment_uberon=UBERON:0000178!4.34e-14!15;UBERON:0000179!4.34e-14!15;UBERON:0000463!4.34e-14!15;UBERON:0007023!7.42e-12!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.89e-12;15!UBERON:0000179;5.89e-12;15!UBERON:0000463;5.89e-12;15!UBERON:0002106;9.43e-11;3!UBERON:0002390;5.13e-09;32!UBERON:0002193;6.03e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,5.99e-12,15;UBERON:0000179,5.99e-12,15;UBERON:0000463,5.99e-12,15;UBERON:0002106,8.82e-11,3;UBERON:0004854,8.82e-11,3;UBERON:0009034,8.82e-11,3;UBERON:0002095,8.82e-11,3;UBERON:0004782,8.82e-11,3;UBERON:0003281,8.82e-11,3;UBERON:0009664,8.82e-11,3;UBERON:0002296,8.82e-11,3;UBERON:0005602,8.82e-11,3;UBERON:0001179,8.82e-11,3;UBERON:0006293,8.82e-11,3 | |||
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| ||
|short_description=p@chr9:37027670..37027709,- | |short_description=p@chr9:37027670..37027709,- | ||
}} | }} |
Latest revision as of 01:58, 1 August 2015
Short description: | p@chr9:37027670..37027709, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:37027670..37027709, - |
Coexpression cluster: | C857_non_lymphoma_CD19_acute_diffuse_Burkitt_B |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 7.49e-74 | 24 |
pro-B cell | 7.49e-74 | 24 |
B cell | 1.07e-47 | 14 |
lymphocyte | 8.72e-36 | 53 |
common lymphoid progenitor | 8.72e-36 | 53 |
lymphoid lineage restricted progenitor cell | 1.57e-33 | 52 |
nongranular leukocyte | 3.66e-15 | 115 |
leukocyte | 8.58e-12 | 136 |
precursor B cell | 1.12e-11 | 3 |
hematopoietic lineage restricted progenitor cell | 8.28e-11 | 120 |
hematopoietic stem cell | 2.52e-08 | 168 |
mature B cell | 3.20e-08 | 2 |
pre-B-II cell | 3.20e-08 | 2 |
transitional stage B cell | 3.20e-08 | 2 |
small pre-B-II cell | 3.20e-08 | 2 |
immature B cell | 3.20e-08 | 2 |
Merkel cell | 3.32e-08 | 2 |
hematopoietic cell | 1.38e-07 | 177 |
hematopoietic oligopotent progenitor cell | 2.11e-07 | 161 |
hematopoietic multipotent progenitor cell | 2.11e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
blood | 5.99e-12 | 15 |
haemolymphatic fluid | 5.99e-12 | 15 |
organism substance | 5.99e-12 | 15 |
spleen | 8.82e-11 | 3 |
gastrointestinal system mesentery | 8.82e-11 | 3 |
stomach region | 8.82e-11 | 3 |
mesentery | 8.82e-11 | 3 |
gastrointestinal system serosa | 8.82e-11 | 3 |
mesentery of stomach | 8.82e-11 | 3 |
gut mesentery | 8.82e-11 | 3 |
dorsal mesentery | 8.82e-11 | 3 |
dorsal mesogastrium | 8.82e-11 | 3 |
peritoneal cavity | 8.82e-11 | 3 |
spleen primordium | 8.82e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 1.43e-12 | 10 |