FFCP PHASE1:Hg19::chrX:29678307..29678312,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chrX:29678307..29678312,+ | |||
|coexpression_cluster_id=C461 | |coexpression_cluster_id=C461 | ||
|description=CAGE_peak_at_chrX:29678307..29678312,+ | |description=CAGE_peak_at_chrX:29678307..29678312,+ | ||
|id=chrX:29678307..29678312,+ | |id=chrX:29678307..29678312,+ | ||
|ontology_enrichment_celltype=CL:0000147!6.04e-15!14;CL:1000306!6.92e-14!4;CL:0002547!6.92e-14!4;CL:0002274!3.38e-11!5;CL:0000457!3.38e-11!5;CL:0002191!3.38e-11!5;CL:0000097!3.38e-11!5;CL:0000831!3.38e-11!5;CL:0002028!3.38e-11!5;CL:0000148!6.69e-10!10;CL:0000541!6.69e-10!10;CL:0000710!2.82e-07!20;CL:0002566!3.85e-07!1;CL:0000342!4.60e-07!1;CL:0002565!4.60e-07!1;CL:0000149!4.76e-07!4 | |ontology_enrichment_celltype=CL:0000147!6.04e-15!14;CL:1000306!6.92e-14!4;CL:0002547!6.92e-14!4;CL:0002274!3.38e-11!5;CL:0000457!3.38e-11!5;CL:0002191!3.38e-11!5;CL:0000097!3.38e-11!5;CL:0000831!3.38e-11!5;CL:0002028!3.38e-11!5;CL:0000148!6.69e-10!10;CL:0000541!6.69e-10!10;CL:0000710!2.82e-07!20;CL:0002566!3.85e-07!1;CL:0000342!4.60e-07!1;CL:0002565!4.60e-07!1;CL:0000149!4.76e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0000322;1.71e-14;3!CL:0000083;3.26e-11;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000322,1.83e-14,3;CL:0000083,3.10e-11,4;CL:0000223,6.02e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0008814;3.11e-21;2!UBERON:0010056;3.11e-21;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3910;5.15e-21;2!DOID:4929;5.15e-21;2!DOID:1793;3.26e-11;4!DOID:3908;3.10e-09;5!DOID:170;6.55e-08;6!DOID:1325;5.86e-07;7!DOID:3904;5.86e-07;7 | |||
|ontology_enrichment_disease_v019_2=DOID:4929,4.66e-21,2;DOID:3910,5.70e-21,2;DOID:1793,3.10e-11,4;DOID:3908,3.22e-09,5;DOID:170,6.34e-08,6;DOID:1325,6.04e-07,7;DOID:3904,6.04e-07,7 | |||
|ontology_enrichment_uberon=UBERON:0000415!6.92e-14!4;UBERON:0007240!6.92e-14!4;UBERON:0005742!6.92e-14!4;UBERON:0005734!6.92e-14!4;UBERON:0004664!6.92e-14!4;UBERON:0004663!6.92e-14!4;UBERON:0000060!3.57e-08!12;UBERON:0002506!4.60e-07!1;UBERON:0001769!4.60e-07!1 | |ontology_enrichment_uberon=UBERON:0000415!6.92e-14!4;UBERON:0007240!6.92e-14!4;UBERON:0005742!6.92e-14!4;UBERON:0005734!6.92e-14!4;UBERON:0004664!6.92e-14!4;UBERON:0004663!6.92e-14!4;UBERON:0000060!3.57e-08!12;UBERON:0002506!4.60e-07!1;UBERON:0001769!4.60e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0004903;5.15e-21;2!UBERON:0002173;5.15e-21;2!UBERON:0002186;5.15e-21;2!UBERON:0001723;1.22e-14;3!UBERON:0001033;1.22e-14;3!UBERON:0004821;1.71e-14;3!UBERON:0007499;1.71e-14;3!UBERON:0003215;1.71e-14;3!UBERON:0010368;1.71e-14;3!UBERON:0009911;1.71e-14;3!UBERON:0002299;1.71e-14;3!UBERON:0006524;1.71e-14;3!UBERON:0008874;1.71e-14;3!UBERON:0002169;1.71e-14;3!UBERON:0004894;1.71e-14;3!UBERON:0003343;2.53e-11;4!UBERON:0004785;2.53e-11;4!UBERON:0009856;3.26e-11;4!UBERON:0000974;5.54e-08;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,5.70e-21,2;UBERON:0002173,5.70e-21,2;UBERON:0002186,5.70e-21,2;UBERON:0001723,1.22e-14,3;UBERON:0001033,1.22e-14,3;UBERON:0010056,1.22e-14,3;UBERON:0004821,1.83e-14,3;UBERON:0003215,1.83e-14,3;UBERON:0010368,1.83e-14,3;UBERON:0009911,1.83e-14,3;UBERON:0002299,1.83e-14,3;UBERON:0006524,1.83e-14,3;UBERON:0008874,1.83e-14,3;UBERON:0002169,1.83e-14,3;UBERON:0004894,1.83e-14,3;UBERON:0003343,2.53e-11,4;UBERON:0004785,2.53e-11,4 | |||
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|short_description=p@chrX:29678307..29678312,+ | |short_description=p@chrX:29678307..29678312,+ | ||
}} | }} |
Latest revision as of 07:43, 1 August 2015
Short description: | p@chrX:29678307..29678312, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chrX:29678307..29678312, + |
Coexpression cluster: | C461_oral_chorionic_squamous_amniotic_epidermoid_gall_bronchogenic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 1.83e-14 | 3 |
epithelial cell of pancreas | 3.10e-11 | 4 |
endodermal cell | 6.02e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 5.70e-21 | 2 |
alveolar duct | 5.70e-21 | 2 |
bronchiole | 5.70e-21 | 2 |
tongue | 1.22e-14 | 3 |
gustatory system | 1.22e-14 | 3 |
future tongue | 1.22e-14 | 3 |
pulmonary alveolus epithelium | 1.83e-14 | 3 |
alveolus | 1.83e-14 | 3 |
pulmonary lobule | 1.83e-14 | 3 |
lobule | 1.83e-14 | 3 |
alveolus of lung | 1.83e-14 | 3 |
alveolar system | 1.83e-14 | 3 |
pulmonary acinus | 1.83e-14 | 3 |
alveolar sac | 1.83e-14 | 3 |
alveolar wall | 1.83e-14 | 3 |
mucosa of oral region | 2.53e-11 | 4 |
respiratory system mucosa | 2.53e-11 | 4 |
Ontology term | p-value | n |
---|---|---|
tubular adenocarcinoma | 4.66e-21 | 2 |
lung adenocarcinoma | 5.70e-21 | 2 |
pancreatic cancer | 3.10e-11 | 4 |
non-small cell lung carcinoma | 3.22e-09 | 5 |
endocrine gland cancer | 6.34e-08 | 6 |
bronchus cancer | 6.04e-07 | 7 |
bronchogenic carcinoma | 6.04e-07 | 7 |