FFCP PHASE1:Hg19::chr19:50436021..50436046,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr19:50436021..50436046,+
|short_description=p1@MIR4751
|description=CAGE_peak_1_at_MIR4751_5end
|association_with_transcript=-274bp_to_NR_039906_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=100616483 | |EntrezGene=100616483 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=41819 | |HGNC=41819 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-274bp_to_NR_039906_5end | |||
|cluster_id=chr19:50436021..50436046,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_1_at_MIR4751_5end | |||
|id=chr19:50436021..50436046,+ | |||
|ontology_enrichment_celltype=CL:0000860!1.03e-07!45;CL:0002057!1.19e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.47e-14;33!CL:0002057;9.47e-14;33!CL:0000473;1.59e-11;39!CL:0000234;1.59e-11;39!CL:0000136;4.98e-09;13!CL:0002334;1.44e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,7.47e-12,427;CL:0000473,1.44e-11,48;CL:0000234,1.44e-11,48;CL:0000723,2.57e-11,433;CL:0000134,2.67e-11,354;CL:0000136,3.22e-11,15;CL:0000219,9.05e-11,386;CL:0000860,1.13e-10,42;CL:0002057,1.13e-10,42;CL:0002320,1.24e-10,361;CL:0000034,1.25e-10,441;CL:0002194,1.09e-08,59;CL:0000576,1.09e-08,59;CL:0000040,1.09e-08,59;CL:0000559,1.09e-08,59;CL:0002009,3.41e-08,61;CL:0002334,1.29e-07,12;CL:0000839,4.24e-07,66;CL:0000557,6.67e-07,67 | |||
|ontology_enrichment_development_v019=CL:0002057;7.60e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;1.63e-11;14!UBERON:0004457;2.00e-11;9!UBERON:0000042;2.00e-11;9!UBERON:0003688;4.09e-10;6!UBERON:0002358;4.09e-10;6!UBERON:0003684;4.09e-10;6!UBERON:0001178;4.09e-10;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001013,3.61e-11,14;UBERON:0002384,1.09e-10,371;UBERON:0003688,3.85e-10,6;UBERON:0002358,3.85e-10,6;UBERON:0003684,3.85e-10,6;UBERON:0001178,3.85e-10,6;UBERON:0004457,5.59e-10,12;UBERON:0000042,5.59e-10,12 | |||
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| ||
|short_description=p1@MIR4751 | |||
}} | }} |
Latest revision as of 10:13, 19 September 2015
Short description: | p1@MIR4751 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MIR4751_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -274bp_to_NR_039906_5end |
EntrezGene: | MIR4751 |
HGNC: | 41819 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 7.47e-12 | 427 |
defensive cell | 1.44e-11 | 48 |
phagocyte | 1.44e-11 | 48 |
somatic stem cell | 2.57e-11 | 433 |
mesenchymal cell | 2.67e-11 | 354 |
fat cell | 3.22e-11 | 15 |
motile cell | 9.05e-11 | 386 |
classical monocyte | 1.13e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.13e-10 | 42 |
connective tissue cell | 1.24e-10 | 361 |
stem cell | 1.25e-10 | 441 |
monopoietic cell | 1.09e-08 | 59 |
monocyte | 1.09e-08 | 59 |
monoblast | 1.09e-08 | 59 |
promonocyte | 1.09e-08 | 59 |
macrophage dendritic cell progenitor | 3.41e-08 | 61 |
preadipocyte | 1.29e-07 | 12 |
myeloid lineage restricted progenitor cell | 4.24e-07 | 66 |
granulocyte monocyte progenitor cell | 6.67e-07 | 67 |
Ontology term | p-value | n |
---|---|---|
adipose tissue | 3.61e-11 | 14 |
connective tissue | 1.09e-10 | 371 |
omentum | 3.85e-10 | 6 |
peritoneum | 3.85e-10 | 6 |
abdominal cavity | 3.85e-10 | 6 |
visceral peritoneum | 3.85e-10 | 6 |
cavity lining | 5.59e-10 | 12 |
serous membrane | 5.59e-10 | 12 |