FFCP PHASE1:Hg19::chr19:51471925..51471946,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:51471925..51471946,-
|short_description=p4@KLK6
|description=CAGE_peak_4_at_KLK6_5end
|association_with_transcript=100bp_to_ENST00000376851,ENST0000039180...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5653 | |EntrezGene=5653 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6367 | |HGNC=6367 | ||
|TSSclassifier=strong | |||
|UniProt=Q92876 | |UniProt=Q92876 | ||
|association_with_transcript=100bp_to_ENST00000376851,ENST00000391808,NM_001012964,NM_001012965,uc002pui.2,uc002puj.2,uc010ycn.1_5end | |||
|cluster_id=chr19:51471925..51471946,- | |||
|coexpression_cluster_id=C849 | |||
|description=CAGE_peak_4_at_KLK6_5end | |||
|id=chr19:51471925..51471946,- | |||
|ontology_enrichment_celltype=CL:0002322!1.82e-08!5;CL:1000507!6.00e-07!12;CL:1000494!6.00e-07!12;CL:0000239!9.72e-07!3;CL:1000615!9.72e-07!3;CL:0002306!9.72e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002178;2.30e-08;3!CL:0000239;3.55e-08;3!CL:1000615;3.55e-08;3!CL:0002306;3.55e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,2.31e-08,3;CL:0000239,3.68e-08,3;CL:1000615,3.68e-08,3;CL:0002306,3.68e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0008814;9.73e-12;2!UBERON:0010056;9.73e-12;2 | |||
|ontology_enrichment_disease=DOID:299!5.90e-12!25;DOID:305!7.89e-09!106 | |||
|ontology_enrichment_disease_v019=DOID:299;4.60e-13;25!DOID:4074;5.51e-12;2!DOID:4905;5.51e-12;2!DOID:3498;5.51e-12;2!DOID:3493;1.03e-11;2!DOID:170;1.37e-08;6!DOID:3111;6.07e-07;1!DOID:3603;6.07e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:299,4.35e-13,25;DOID:4074,5.22e-12,2;DOID:4905,5.22e-12,2;DOID:3498,5.22e-12,2;DOID:3493,8.51e-12,2;DOID:305,8.79e-10,106;DOID:170,1.38e-08,6;DOID:3111,6.08e-07,1;DOID:3603,6.08e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!5.44e-24!115;UBERON:0001049!7.38e-23!57;UBERON:0005068!7.38e-23!57;UBERON:0006241!7.38e-23!57;UBERON:0007135!7.38e-23!57;UBERON:0003080!1.12e-17!42;UBERON:0002616!3.81e-17!59;UBERON:0002780!1.55e-16!41;UBERON:0001890!1.55e-16!41;UBERON:0006240!1.55e-16!41;UBERON:0001893!2.72e-15!34;UBERON:0002020!2.95e-15!34;UBERON:0003528!2.95e-15!34;UBERON:0001017!8.16e-15!82;UBERON:0000955!3.16e-14!69;UBERON:0006238!3.16e-14!69;UBERON:0002791!3.47e-14!33;UBERON:0003075!3.79e-14!86;UBERON:0007284!3.79e-14!86;UBERON:0005743!1.06e-13!86;UBERON:0002346!4.20e-13!90;UBERON:0001869!7.19e-13!32;UBERON:0004121!1.58e-12!169;UBERON:0002553!1.86e-12!70;UBERON:0004111!6.04e-12!241;UBERON:0000924!6.13e-12!173;UBERON:0006601!6.13e-12!173;UBERON:0000062!8.21e-12!511;UBERON:0000073!1.47e-11!94;UBERON:0001016!1.47e-11!94;UBERON:0003886!4.37e-11!63;UBERON:0002298!1.68e-10!8;UBERON:0002619!2.26e-10!22;UBERON:0000477!2.53e-10!286;UBERON:0000153!2.83e-10!129;UBERON:0007811!2.83e-10!129;UBERON:0000475!2.88e-10!365;UBERON:0003887!3.61e-10!21;UBERON:0003056!3.78e-10!61;UBERON:0001950!5.75e-10!20;UBERON:0000033!6.71e-10!123;UBERON:0000025!8.06e-10!194;UBERON:0000464!9.38e-10!104;UBERON:0000064!2.24e-09!219;UBERON:0000489!3.10e-09!32;UBERON:0000058!4.14e-09!26;UBERON:0002308!7.02e-09!9;UBERON:0000125!7.02e-09!9;UBERON:0000956!8.58e-09!25;UBERON:0000203!8.58e-09!25;UBERON:0000080!3.25e-08!18;UBERON:0002120!3.25e-08!18;UBERON:0004875!3.25e-08!18;UBERON:0005721!3.25e-08!18;UBERON:0005754!3.25e-08!18;UBERON:0007297!3.25e-08!18;UBERON:0000483!4.04e-08!309;UBERON:0000922!5.02e-08!612;UBERON:0000466!5.96e-08!126;UBERON:0000119!6.82e-08!312;UBERON:0000468!1.90e-07!659;UBERON:0000473!3.20e-07!8;UBERON:0002113!3.28e-07!27;UBERON:0003918!3.28e-07!27;UBERON:0005095!3.28e-07!27;UBERON:0007687!3.28e-07!27;UBERON:0006555!3.51e-07!17;UBERON:0005103!3.51e-07!17;UBERON:0000083!3.51e-07!17;UBERON:0009201!3.51e-07!17;UBERON:0004819!3.51e-07!17;UBERON:0006553!3.51e-07!17;UBERON:0003074!3.51e-07!17;UBERON:0003060!3.51e-07!17;UBERON:0004876!3.63e-07!20;UBERON:0003064!5.34e-07!37;UBERON:0009773!6.00e-07!12;UBERON:0001231!6.00e-07!12;UBERON:0004810!6.00e-07!12;UBERON:0003101!8.81e-07!22;UBERON:0000079!8.81e-07!22;UBERON:0003135!9.37e-07!11;UBERON:0006853!9.72e-07!3;UBERON:0007685!9.72e-07!3;UBERON:0004134!9.72e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0006853;3.55e-08;3!UBERON:0007685;3.55e-08;3!UBERON:0004134;3.55e-08;3!UBERON:0002106;3.81e-08;3!UBERON:0001723;4.17e-08;3!UBERON:0001033;4.17e-08;3!UBERON:0002075;2.21e-07;18!UBERON:0004913;4.09e-07;1!UBERON:0003703;4.09e-07;1!UBERON:0001174;4.09e-07;1!UBERON:0004914;4.09e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000945,3.67e-11,8;UBERON:0010039,3.67e-11,8;UBERON:0001723,3.43e-08,3;UBERON:0001033,3.43e-08,3;UBERON:0010056,3.43e-08,3;UBERON:0002106,3.68e-08,3;UBERON:0004854,3.68e-08,3;UBERON:0009034,3.68e-08,3;UBERON:0006853,3.68e-08,3;UBERON:0002095,3.68e-08,3;UBERON:0004782,3.68e-08,3;UBERON:0003281,3.68e-08,3;UBERON:0007685,3.68e-08,3;UBERON:0004134,3.68e-08,3;UBERON:0009664,3.68e-08,3;UBERON:0002296,3.68e-08,3;UBERON:0005602,3.68e-08,3;UBERON:0001179,3.68e-08,3;UBERON:0006293,3.68e-08,3;UBERON:0005177,1.51e-07,101;UBERON:0002075,2.15e-07,18;UBERON:0004913,4.09e-07,1;UBERON:0003703,4.09e-07,1;UBERON:0001174,4.09e-07,1;UBERON:0004914,4.09e-07,1 | |||
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| ||
|short_description=p4@KLK6 | |||
}} | }} |
Latest revision as of 13:28, 19 September 2015
Short description: | p4@KLK6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_KLK6_5end |
Coexpression cluster: | C849_papillotubular_lung_mucinous_oral_Renal_clear_gall |
Association with transcript: | 100bp_to_ENST00000376851, ENST00000391808, NM_001012964, NM_001012965, uc002pui.2, uc002puj.2, uc010ycn.1_5end |
EntrezGene: | KLK6 |
HGNC: | 6367 |
UniProt: | Q92876 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 2.31e-08 | 3 |
brush border epithelial cell | 3.68e-08 | 3 |
kidney cortex tubule cell | 3.68e-08 | 3 |
epithelial cell of proximal tubule | 3.68e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
stomach | 3.67e-11 | 8 |
food storage organ | 3.67e-11 | 8 |
tongue | 3.43e-08 | 3 |
gustatory system | 3.43e-08 | 3 |
future tongue | 3.43e-08 | 3 |
spleen | 3.68e-08 | 3 |
gastrointestinal system mesentery | 3.68e-08 | 3 |
stomach region | 3.68e-08 | 3 |
renal cortex tubule | 3.68e-08 | 3 |
mesentery | 3.68e-08 | 3 |
gastrointestinal system serosa | 3.68e-08 | 3 |
mesentery of stomach | 3.68e-08 | 3 |
region of nephron tubule | 3.68e-08 | 3 |
proximal tubule | 3.68e-08 | 3 |
gut mesentery | 3.68e-08 | 3 |
dorsal mesentery | 3.68e-08 | 3 |
dorsal mesogastrium | 3.68e-08 | 3 |
peritoneal cavity | 3.68e-08 | 3 |
spleen primordium | 3.68e-08 | 3 |
trunk region element | 1.51e-07 | 101 |
viscus | 2.15e-07 | 18 |
hepatopancreatic ampulla | 4.09e-07 | 1 |
extrahepatic bile duct | 4.09e-07 | 1 |
common bile duct | 4.09e-07 | 1 |
duodenal papilla | 4.09e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
adenocarcinoma | 4.35e-13 | 25 |
pancreas adenocarcinoma | 5.22e-12 | 2 |
pancreatic carcinoma | 5.22e-12 | 2 |
pancreatic ductal adenocarcinoma | 5.22e-12 | 2 |
signet ring cell adenocarcinoma | 8.51e-12 | 2 |
carcinoma | 8.79e-10 | 106 |
endocrine gland cancer | 1.38e-08 | 6 |
cystadenocarcinoma | 6.08e-07 | 1 |
mucinous cystadenocarcinoma | 6.08e-07 | 1 |