FFCP PHASE1:Hg19::chr19:1497248..1497267,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:1497248..1497267,+ | |||
|coexpression_cluster_id=C1239 | |coexpression_cluster_id=C1239 | ||
|description=CAGE_peak_at_chr19:1497248..1497267,+ | |description=CAGE_peak_at_chr19:1497248..1497267,+ | ||
|id=chr19:1497248..1497267,+ | |id=chr19:1497248..1497267,+ | ||
|ontology_enrichment_celltype=CL:0000182;4.02e-10;12 | |ontology_enrichment_celltype=CL:0000223!4.62e-07!59 | ||
| | |ontology_enrichment_celltype_v019=CL:0000182;4.02e-10;12 | ||
|ontology_enrichment_disease= | |ontology_enrichment_celltype_v019_2=CL:0000182,3.96e-10,12 | ||
|ontology_enrichment_uberon=UBERON:0002108;6.34e-23;4!UBERON:0000160;4.32e-17;17!UBERON:0000473;9.21e-15;8!UBERON:0005409;2.23e-13;22!UBERON:0002107;5.82e-11;19!UBERON:0006925;5.82e-11;19!UBERON:0003135;6.75e-11;11!UBERON:0002423;2.22e-08;25!UBERON:0001007;5.40e-08;81!UBERON:0004921;6.26e-08;33!UBERON:0002702;1.99e-07;2!UBERON:0002365;5.18e-07;31!UBERON:0002330;5.18e-07;31 | |ontology_enrichment_development_v019=UBERON:0009117;6.26e-12;10!UBERON:0005564;6.26e-12;10 | ||
|ontology_enrichment_disease=DOID:305!2.88e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001007!3.63e-09!155;UBERON:0001555!3.63e-09!155;UBERON:0007026!3.63e-09!155;UBERON:0004119!2.18e-08!169;UBERON:0000925!2.18e-08!169;UBERON:0006595!2.18e-08!169;UBERON:0004921!2.09e-07!129;UBERON:0004185!2.09e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0002108;6.34e-23;4!UBERON:0000160;4.32e-17;17!UBERON:0000473;9.21e-15;8!UBERON:0005409;2.23e-13;22!UBERON:0002107;5.82e-11;19!UBERON:0006925;5.82e-11;19!UBERON:0003135;6.75e-11;11!UBERON:0002423;2.22e-08;25!UBERON:0001007;5.40e-08;81!UBERON:0004921;6.26e-08;33!UBERON:0002702;1.99e-07;2!UBERON:0002365;5.18e-07;31!UBERON:0002330;5.18e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,5.46e-23,4;UBERON:0000160,4.78e-17,17;UBERON:0000473,9.21e-15,8;UBERON:0005409,8.43e-12,25;UBERON:0002107,5.90e-11,19;UBERON:0006925,5.90e-11,19;UBERON:0008836,5.90e-11,19;UBERON:0003135,6.75e-11,11;UBERON:0008835,1.72e-09,22;UBERON:0003894,1.72e-09,22;UBERON:0009854,4.35e-09,23;UBERON:0007499,2.24e-08,25;UBERON:0009497,2.24e-08,25;UBERON:0000015,2.24e-08,25;UBERON:0002423,2.24e-08,25;UBERON:0006235,2.24e-08,25;UBERON:0004161,2.24e-08,25;UBERON:0009856,4.63e-08,26;UBERON:0002702,1.75e-07,2;UBERON:0004921,1.87e-07,118;UBERON:0002365,8.70e-07,31;UBERON:0002330,8.70e-07,31 | |||
|phase1_expression=0,0.856402095563933,0.140954404095971,0,0.446961094427288,0,0,0,1.30592814099919,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24430121722827,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0.103325781175765,0,0,0,0,0,0.125118519871964,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0.194874010322397,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0.348581828608555,0.10366105501537,0,0,0,0,0,0,0,0,0.337169380156203,0,0.330881918197182,0,0.237270619111097,0.269662616320329,0,0,0,0,0,0,6.33775174109154,4.91413608338813,2.36315962672562,0,1.10689594688802,0,0.109750285408626,0,0,0.185176890317059,0,0,0,0.115930404975077,0,0,0,0,0,0.858486162094873,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0.207328115540772,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.966875596732978,0.200506470303285,0,0.114814448164607,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.9273691048295,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0.0890320356467374,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0.166849141711909,0.390776190804081,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0.281338832821026,0.111308705022906,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0.371072392647405,0,0.260427761085233,0.699679999969566,0.724999575434793,0,0,0,0,0,0,0,0,0,0.221158519862449,0,0,0,0,0,0,0,0.448788222048861,0,0,0,0,0,0.156980256395025,0,0.451191321234361,0.19606253431774,0.335643173951685,0.37950746544837,0,0,0,0.424059214301822,0,0,1.14994833854341,0,0,0,0.208843899010911,0,0,0,0,0,0.242780379534093,0,0,0,0,0,0,0,0,0,0,0,0,0.520679215005393,0,0,0,0,0,0.146178634172371,0,0,0.176512253383001,2.93774963014692,0,0.19871461170299,0,0,0,0.213452994739353,0,0.144090417154106,0,0,0,0,0.471388069233591,0.135904206073614,0,0.203996435272644,0,0,0,0,0.429765441419957,0,0,0.229160424011684,0,0,0,0,0,0,0,0.0787831823072236,0.824158583811665,0.539228350833479,0,0,0.795229689809303,0.272406812223151,0,0.412618309791701,0,0,0,0,0.335434687599266,0.157611414598396,0.0524545881349981,0.211200673038813,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,4.10346254298631,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0,0,1.77213635993397,0.366078794705889,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0.694567422971502,0,0,0.308801447160972,0,0.353378291891762,0,0,0,0,0,0.138258436151731,0,0,0,0.327609848846413,0,0,0,0.106691729694141,0,0,0,0.139879507719444,0,0,0,0,0,0.169732529954025,0,0,0,0,0,0,0,0,0.192687675289379,0,0.159633859057151,0,0,0,0.161475645631851,0,0,0.11796972334774,0.366857197043358,0,0,0,0,0.0752103283492573,0.20170506870352,0.781514011233092,0,0.327543835020193,0,0.0675375846183947,0,0.206686796501184,0.126831620387814,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.0657727735628491,0.118193840883968,0.111231401892069,0.078493092850514,0,0,0,0,0,0.571812353413251,0.47404083519818,0,0,0,0.207216164163037,0.3414369541879,0,0,0,0,0.423387050190929,0.22910686854405,0,0,0,0,0.121917924982269,0,0.102662806856247,0,0,0,0.397901550322736,0.118920090777569,0,0.219881033490858,0,2.54674721756217,1.96703604453562,0,0,0,0.196308467114945,0,0.4226557275834,0,0,0,0,0,0.352894871715692,0.0802413666891683,0,0,0,0,0.0679914901909147,0,2.1161073620616,0,0,0,0,0.218531143927391,0,0.305966489225945,0,0,1.25353769646188,4.54672189309436,5.35928260312357,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0.0673520530145875,0.0717222053926763,0,0.0814032686109745,0,0,0.0898252021065869,0,0,0,0,0,0 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|phase1_expression=0,0.856402095563933,0.140954404095971,0,0.446961094427288,0,0,0,1.30592814099919,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24430121722827,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0.103325781175765,0,0,0,0,0,0.125118519871964,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0.194874010322397,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0.348581828608555,0.10366105501537,0,0,0,0,0,0,0,0,0.337169380156203,0,0.330881918197182,0,0.237270619111097,0.269662616320329,0,0,0,0,0,0,6.33775174109154,4.91413608338813,2.36315962672562,0,1.10689594688802,0,0.109750285408626,0,0,0.185176890317059,0,0,0,0.115930404975077,0,0,0,0,0,0.858486162094873,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0.207328115540772,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.966875596732978,0.200506470303285,0,0.114814448164607,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.9273691048295,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0.0890320356467374,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0.166849141711909,0.390776190804081,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0.281338832821026,0.111308705022906,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0.371072392647405,0,0.260427761085233,0.699679999969566,0.724999575434793,0,0,0,0,0,0,0,0,0,0.221158519862449,0,0,0,0,0,0,0,0.448788222048861,0,0,0,0,0,0.156980256395025,0,0.451191321234361,0.19606253431774,0.335643173951685,0.37950746544837,0,0,0,0.424059214301822,0,0,1.14994833854341,0,0,0,0.208843899010911,0,0,0,0,0,0.242780379534093,0,0,0,0,0,0,0,0,0,0,0,0,0.520679215005393,0,0,0,0,0,0.146178634172371,0,0,0.176512253383001,2.93774963014692,0,0.19871461170299,0,0,0,0.213452994739353,0,0.144090417154106,0,0,0,0,0.471388069233591,0.135904206073614,0,0.203996435272644,0,0,0,0,0.429765441419957,0,0,0.229160424011684,0,0,0,0,0,0,0,0.0787831823072236,0.824158583811665,0.539228350833479,0,0,0.795229689809303,0.272406812223151,0,0.412618309791701,0,0,0,0,0.335434687599266,0.157611414598396,0.0524545881349981,0.211200673038813,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,4.10346254298631,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0,0,1.77213635993397,0.366078794705889,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0.694567422971502,0,0,0.308801447160972,0,0.353378291891762,0,0,0,0,0,0.138258436151731,0,0,0,0.327609848846413,0,0,0,0.106691729694141,0,0,0,0.139879507719444,0,0,0,0,0,0.169732529954025,0,0,0,0,0,0,0,0,0.192687675289379,0,0.159633859057151,0,0,0,0.161475645631851,0,0,0.11796972334774,0.366857197043358,0,0,0,0,0.0752103283492573,0.20170506870352,0.781514011233092,0,0.327543835020193,0,0.0675375846183947,0,0.206686796501184,0.126831620387814,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.0657727735628491,0.118193840883968,0.111231401892069,0.078493092850514,0,0,0,0,0,0.571812353413251,0.47404083519818,0,0,0,0.207216164163037,0.3414369541879,0,0,0,0,0.423387050190929,0.22910686854405,0,0,0,0,0.121917924982269,0,0.102662806856247,0,0,0,0.397901550322736,0.118920090777569,0,0.219881033490858,0,2.54674721756217,1.96703604453562,0,0,0,0.196308467114945,0,0.4226557275834,0,0,0,0,0,0.352894871715692,0.0802413666891683,0,0,0,0,0.0679914901909147,0,2.1161073620616,0,0,0,0,0.218531143927391,0,0.305966489225945,0,0,1.25353769646188,4.54672189309436,5.35928260312357,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0.0673520530145875,0.0717222053926763,0,0.0814032686109745,0,0,0.0898252021065869,0,0,0,0,0,0 | ||
|short_description=p@chr19:1497248..1497267,+ | |short_description=p@chr19:1497248..1497267,+ | ||
}} | }} |
Latest revision as of 04:28, 26 July 2015
Short description: | p@chr19:1497248..1497267, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:1497248..1497267, + |
Coexpression cluster: | C1239_Hepatocyte_liver_small_testis_colon_breast_eye |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.96e-10 | 12 |
Ontology term | p-value | n |
---|---|---|
small intestine | 5.46e-23 | 4 |
intestine | 4.78e-17 | 17 |
testis | 9.21e-15 | 8 |
gastrointestinal system | 8.43e-12 | 25 |
liver | 5.90e-11 | 19 |
digestive gland | 5.90e-11 | 19 |
liver bud | 5.90e-11 | 19 |
male reproductive organ | 6.75e-11 | 11 |
hepatic diverticulum | 1.72e-09 | 22 |
liver primordium | 1.72e-09 | 22 |
digestive tract diverticulum | 4.35e-09 | 23 |
epithelial sac | 2.24e-08 | 25 |
epithelium of foregut-midgut junction | 2.24e-08 | 25 |
anatomical boundary | 2.24e-08 | 25 |
hepatobiliary system | 2.24e-08 | 25 |
foregut-midgut junction | 2.24e-08 | 25 |
septum transversum | 2.24e-08 | 25 |
sac | 4.63e-08 | 26 |
middle frontal gyrus | 1.75e-07 | 2 |
subdivision of digestive tract | 1.87e-07 | 118 |
exocrine gland | 8.70e-07 | 31 |
exocrine system | 8.70e-07 | 31 |