FFCP PHASE1:Hg19::chr10:96443528..96443541,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1562 | |EntrezGene=1562 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2620 | |HGNC=2620 | ||
|TSSclassifier=strong | |||
|UniProt=P33260 | |UniProt=P33260 | ||
|association_with_transcript=150bp_to_ENST00000285979_5end | |association_with_transcript=150bp_to_ENST00000285979_5end | ||
|cluster_id=chr10:96443528..96443541,+ | |||
|coexpression_cluster_id=C25 | |coexpression_cluster_id=C25 | ||
|description=CAGE_peak_5_at_CYP2C18_5end | |description=CAGE_peak_5_at_CYP2C18_5end | ||
|id=chr10:96443528..96443541,+ | |id=chr10:96443528..96443541,+ | ||
|ontology_enrichment_celltype=CL:0002178;1.09e-10;3 | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019=CL:0002178;1.09e-10;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_celltype_v019_2=CL:0002178,1.09e-10,3 | ||
|ontology_enrichment_uberon=UBERON:0002108;1.49e-51;4!UBERON:0005409;2.80e-44;22!UBERON:0000160;9.82e-26;17!UBERON:0004921;1.17e-24;33!UBERON:0000945;2.27e-23;5!UBERON:0010039;2.27e-23;5!UBERON:0001555;1.31e-12;54!UBERON:0002114;8.99e-11;2!UBERON:0001041;5.15e-09;14!UBERON:0001007;3.79e-08;81 | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:299!4.98e-07!25 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.00e-18!35;UBERON:0004921!2.06e-16!129;UBERON:0004185!2.06e-16!129;UBERON:0000160!1.20e-15!27;UBERON:0001007!1.09e-14!155;UBERON:0001555!1.09e-14!155;UBERON:0007026!1.09e-14!155;UBERON:0001155!3.43e-13!9;UBERON:0004119!3.64e-13!169;UBERON:0000925!3.64e-13!169;UBERON:0006595!3.64e-13!169;UBERON:0000059!8.04e-11!11;UBERON:0001154!2.46e-08!1;UBERON:0001153!2.46e-08!1;UBERON:0001041!2.71e-08!98;UBERON:0002372!2.84e-08!1;UBERON:0001961!2.84e-08!1;UBERON:0001744!2.84e-08!1;UBERON:0001735!2.84e-08!1;UBERON:0002108!4.62e-08!14;UBERON:0000077!4.62e-08!130;UBERON:0009854!1.07e-07!23;UBERON:0009497!4.66e-07!25;UBERON:0000015!4.66e-07!25;UBERON:0002423!4.66e-07!25;UBERON:0006235!4.66e-07!25;UBERON:0004161!4.66e-07!25;UBERON:0001042!8.45e-07!10;UBERON:0009145!8.45e-07!10;UBERON:0009856!8.79e-07!26;UBERON:0005057!9.60e-07!26 | |||
|ontology_enrichment_uberon_v019=UBERON:0002108;1.49e-51;4!UBERON:0005409;2.80e-44;22!UBERON:0000160;9.82e-26;17!UBERON:0004921;1.17e-24;33!UBERON:0000945;2.27e-23;5!UBERON:0010039;2.27e-23;5!UBERON:0001555;1.31e-12;54!UBERON:0002114;8.99e-11;2!UBERON:0001041;5.15e-09;14!UBERON:0001007;3.79e-08;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,1.37e-51,4;UBERON:0005409,2.92e-39,25;UBERON:0000160,9.82e-26,17;UBERON:0000945,4.69e-15,8;UBERON:0010039,4.69e-15,8;UBERON:0004921,7.31e-12,118;UBERON:0002114,8.99e-11,2;UBERON:0001007,1.06e-09,145;UBERON:0001555,1.06e-09,145;UBERON:0007026,1.06e-09,145;UBERON:0004119,8.31e-09,160;UBERON:0000925,8.31e-09,160;UBERON:0006595,8.31e-09,160 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0.982827216677626,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935702702041099,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278847488557207,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,3.71521770914025,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,1.44090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439656701034247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3414369541879,0,0,0,0,0,0,0,0,0,0,0.853425474875886,0,0,0,0,0,0,0,0,0,0,10.8815562932202,3.71551252856727,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46067277649303,0,0,0,0,0,2.645134202577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0.435433495793923,0,0.134704106029175,0.0717222053926763,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0.982827216677626,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935702702041099,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278847488557207,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,3.71521770914025,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,1.44090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439656701034247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3414369541879,0,0,0,0,0,0,0,0,0,0,0.853425474875886,0,0,0,0,0,0,0,0,0,0,10.8815562932202,3.71551252856727,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46067277649303,0,0,0,0,0,2.645134202577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0.435433495793923,0,0.134704106029175,0.0717222053926763,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | ||
|short_description=p5@CYP2C18 | |short_description=p5@CYP2C18 | ||
}} | }} |
Latest revision as of 02:33, 20 September 2015
Short description: | p5@CYP2C18 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CYP2C18_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | 150bp_to_ENST00000285979_5end |
EntrezGene: | CYP2C18 |
HGNC: | 2620 |
UniProt: | P33260 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 1.09e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
small intestine | 1.37e-51 | 4 |
gastrointestinal system | 2.92e-39 | 25 |
intestine | 9.82e-26 | 17 |
stomach | 4.69e-15 | 8 |
food storage organ | 4.69e-15 | 8 |
subdivision of digestive tract | 7.31e-12 | 118 |
duodenum | 8.99e-11 | 2 |
digestive system | 1.06e-09 | 145 |
digestive tract | 1.06e-09 | 145 |
primitive gut | 1.06e-09 | 145 |
endoderm-derived structure | 8.31e-09 | 160 |
endoderm | 8.31e-09 | 160 |
presumptive endoderm | 8.31e-09 | 160 |