FFCP PHASE1:Hg19::chr5:167457192..167457194,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:167457192..167457194,+ | |||
|description=CAGE_peak_at_chr5:167457192..167457194,+ | |description=CAGE_peak_at_chr5:167457192..167457194,+ | ||
|id=chr5:167457192..167457194,+ | |id=chr5:167457192..167457194,+ | ||
|ontology_enrichment_celltype=CL:0002620;1.65e-09;23!CL:0000511;1.91e-07;1!CL:0002625;1.91e-07;1!CL:0000216;1.91e-07;1 | |ontology_enrichment_celltype=CL:0002620!8.87e-09!23 | ||
| | |ontology_enrichment_celltype_v019=CL:0002620;1.65e-09;23!CL:0000511;1.91e-07;1!CL:0002625;1.91e-07;1!CL:0000216;1.91e-07;1 | ||
|ontology_enrichment_disease=DOID:114;8.92e-14;2!DOID:3151;8.27e-08;1!DOID:3149;8.27e-08;1!DOID:178;1.91e-07;1!DOID:326;1.91e-07;1!DOID:3978;1.91e-07;1!DOID:3394;1.91e-07;1!DOID:5844;1.91e-07;1!DOID:1287;2.59e-07;4 | |ontology_enrichment_celltype_v019_2=CL:0002620,1.48e-09,23;CL:0000511,1.69e-07,1;CL:0002625,1.69e-07,1;CL:0000216,1.69e-07,1 | ||
|ontology_enrichment_uberon=UBERON:0002619;2.26e-09;22!UBERON:0000956;3.16e-08;25!UBERON:0000203;3.16e-08;25!UBERON:0001136;1.91e-07;1!UBERON:0001343;1.91e-07;1!UBERON:0004910;1.91e-07;1!UBERON:0004813;1.91e-07;1!UBERON:0001950;2.20e-07;20!UBERON:0002346;3.28e-07;4!UBERON:0000923;3.28e-07;4!UBERON:0010316;3.28e-07;4!UBERON:0005291;3.28e-07;4 | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;8.92e-14;2!DOID:3151;8.27e-08;1!DOID:3149;8.27e-08;1!DOID:178;1.91e-07;1!DOID:326;1.91e-07;1!DOID:3978;1.91e-07;1!DOID:3394;1.91e-07;1!DOID:5844;1.91e-07;1!DOID:1287;2.59e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.05e-13,2;DOID:3151,1.07e-07,1;DOID:3149,1.07e-07,1;DOID:178,2.17e-07,1;DOID:326,2.17e-07,1;DOID:3978,2.17e-07,1;DOID:3394,2.17e-07,1;DOID:5844,2.17e-07,1;DOID:1287,2.80e-07,4;DOID:7,4.08e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0002619!2.40e-19!22;UBERON:0002020!1.96e-18!34;UBERON:0003528!1.96e-18!34;UBERON:0001869!2.29e-18!32;UBERON:0000956!7.83e-18!25;UBERON:0000203!7.83e-18!25;UBERON:0001049!3.38e-17!57;UBERON:0005068!3.38e-17!57;UBERON:0006241!3.38e-17!57;UBERON:0007135!3.38e-17!57;UBERON:0001950!4.90e-17!20;UBERON:0001893!8.00e-17!34;UBERON:0002780!2.23e-16!41;UBERON:0001890!2.23e-16!41;UBERON:0006240!2.23e-16!41;UBERON:0002791!3.97e-16!33;UBERON:0001017!5.27e-16!82;UBERON:0003080!8.86e-16!42;UBERON:0005743!1.52e-15!86;UBERON:0002346!5.07e-15!90;UBERON:0000073!1.12e-14!94;UBERON:0001016!1.12e-14!94;UBERON:0000955!1.44e-14!69;UBERON:0006238!1.44e-14!69;UBERON:0003075!4.00e-14!86;UBERON:0007284!4.00e-14!86;UBERON:0002616!6.61e-14!59;UBERON:0000033!9.83e-14!123;UBERON:0000153!1.40e-13!129;UBERON:0007811!1.40e-13!129;UBERON:0000924!1.67e-13!173;UBERON:0006601!1.67e-13!173;UBERON:0004121!1.07e-12!169;UBERON:0003056!1.22e-12!61;UBERON:0000062!7.42e-09!511;UBERON:0001871!1.00e-08!7;UBERON:0000475!1.24e-08!365;UBERON:0000064!1.17e-07!219;UBERON:0007023!3.14e-07!115;UBERON:0002097!3.27e-07!40;UBERON:0000467!8.58e-07!625 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;2.26e-09;22!UBERON:0000956;3.16e-08;25!UBERON:0000203;3.16e-08;25!UBERON:0001136;1.91e-07;1!UBERON:0001343;1.91e-07;1!UBERON:0004910;1.91e-07;1!UBERON:0004813;1.91e-07;1!UBERON:0001950;2.20e-07;20!UBERON:0002346;3.28e-07;4!UBERON:0000923;3.28e-07;4!UBERON:0010316;3.28e-07;4!UBERON:0005291;3.28e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,2.54e-09,22;UBERON:0000956,3.50e-08,25;UBERON:0000203,3.50e-08,25;UBERON:0001136,1.69e-07,1;UBERON:0001343,1.69e-07,1;UBERON:0004910,1.69e-07,1;UBERON:0005154,1.69e-07,1;UBERON:0005295,1.69e-07,1;UBERON:0004813,1.69e-07,1;UBERON:0005297,1.69e-07,1;UBERON:0005294,1.69e-07,1;UBERON:0010141,1.69e-07,1;UBERON:0005891,1.69e-07,1;UBERON:0001950,2.48e-07,20;UBERON:0002097,8.08e-07,41 | |||
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| ||
|short_description=p@chr5:167457192..167457194,+ | |short_description=p@chr5:167457192..167457194,+ | ||
}} | }} |
Latest revision as of 12:46, 30 July 2015
Short description: | p@chr5:167457192..167457194, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:167457192..167457194, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 1.48e-09 | 23 |
androgen binding protein secreting cell | 1.69e-07 | 1 |
seminiferous tubule epithelial cell | 1.69e-07 | 1 |
Sertoli cell | 1.69e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
regional part of cerebral cortex | 2.54e-09 | 22 |
cerebral cortex | 3.50e-08 | 25 |
pallium | 3.50e-08 | 25 |
mesothelium | 1.69e-07 | 1 |
seminiferous tubule of testis | 1.69e-07 | 1 |
epithelium of male gonad | 1.69e-07 | 1 |
epithelial cord | 1.69e-07 | 1 |
sex cord | 1.69e-07 | 1 |
seminiferous tubule epithelium | 1.69e-07 | 1 |
testis sex cord | 1.69e-07 | 1 |
genital ridge | 1.69e-07 | 1 |
primitive sex cord of indifferent gonad | 1.69e-07 | 1 |
coelomic epithelium | 1.69e-07 | 1 |
neocortex | 2.48e-07 | 20 |
skin of body | 8.08e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
heart disease | 1.05e-13 | 2 |
skin squamous cell carcinoma | 1.07e-07 | 1 |
keratoacanthoma | 1.07e-07 | 1 |
vascular disease | 2.17e-07 | 1 |
ischemia | 2.17e-07 | 1 |
extrinsic cardiomyopathy | 2.17e-07 | 1 |
myocardial ischemia | 2.17e-07 | 1 |
myocardial infarction | 2.17e-07 | 1 |
cardiovascular system disease | 2.80e-07 | 4 |
disease of anatomical entity | 4.08e-07 | 39 |