FFCP PHASE1:Hg19::chr12:208313..208318,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:208313..208318,+ | |||
|coexpression_cluster_id=C41 | |coexpression_cluster_id=C41 | ||
|description=CAGE_peak_at_chr12:208313..208318,+ | |description=CAGE_peak_at_chr12:208313..208318,+ | ||
|id=chr12:208313..208318,+ | |id=chr12:208313..208318,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype=CL:0000594!9.12e-07!3 | ||
| | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;2.39e-66;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0000966;1.48e-40;5!UBERON:0005388;1.48e-40;5!UBERON:0001802;1.48e-40;5!UBERON:0000019;6.95e-12;19!UBERON:0000047;6.95e-12;19!UBERON:0004088;6.95e-12;19!UBERON:0010230;6.95e-12;19!UBERON:0000970;2.29e-11;20!UBERON:0002104;6.74e-11;21!UBERON:0001456;6.74e-11;21!UBERON:0000020;4.42e-10;23!UBERON:0001032;1.01e-09;24!UBERON:0004456;1.01e-09;24 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001875!4.29e-34!2;UBERON:0006514!4.29e-34!2;UBERON:0003112!5.26e-18!1;UBERON:0000032!5.26e-18!1;UBERON:0005253!5.26e-18!1;UBERON:0003128!5.26e-18!1;UBERON:0002241!5.26e-18!1;UBERON:0001703!5.26e-18!1;UBERON:0004761!5.26e-18!1;UBERON:0009617!5.26e-18!1;UBERON:0001869!7.38e-18!32;UBERON:0002581!1.70e-17!1;UBERON:0002791!2.49e-17!33;UBERON:0002020!7.85e-17!34;UBERON:0003528!7.85e-17!34;UBERON:0001893!7.85e-17!34;UBERON:0005743!1.40e-14!86;UBERON:0000955!2.32e-14!69;UBERON:0006238!2.32e-14!69;UBERON:0002780!5.27e-14!41;UBERON:0001890!5.27e-14!41;UBERON:0006240!5.27e-14!41;UBERON:0003080!1.13e-13!42;UBERON:0007023!1.22e-13!115;UBERON:0000073!3.66e-13!94;UBERON:0001016!3.66e-13!94;UBERON:0003056!9.71e-13!61;UBERON:0000033!1.74e-12!123;UBERON:0001017!4.71e-12!82;UBERON:0000153!7.10e-12!129;UBERON:0007811!7.10e-12!129;UBERON:0000200!7.48e-12!6;UBERON:0002619!8.12e-12!22;UBERON:0000956!1.73e-10!25;UBERON:0000203!1.73e-10!25;UBERON:0009663!1.77e-10!7;UBERON:0001049!4.33e-10!57;UBERON:0005068!4.33e-10!57;UBERON:0006241!4.33e-10!57;UBERON:0007135!4.33e-10!57;UBERON:0001954!9.46e-10!2;UBERON:0003022!9.46e-10!2;UBERON:0002421!9.46e-10!2;UBERON:0002600!9.46e-10!2;UBERON:0002616!9.54e-10!59;UBERON:0003075!5.85e-09!86;UBERON:0007284!5.85e-09!86;UBERON:0002346!1.52e-08!90;UBERON:0002308!2.37e-08!9;UBERON:0002420!2.37e-08!9;UBERON:0000125!2.37e-08!9;UBERON:0007245!2.37e-08!9;UBERON:0010009!2.37e-08!9;UBERON:0010011!2.37e-08!9;UBERON:0000454!2.37e-08!9;UBERON:0001950!1.20e-07!20;UBERON:0004121!4.39e-07!169;UBERON:0000924!6.64e-07!173;UBERON:0006601!6.64e-07!173;UBERON:0002771!8.62e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000966;1.48e-40;5!UBERON:0005388;1.48e-40;5!UBERON:0001802;1.48e-40;5!UBERON:0000019;6.95e-12;19!UBERON:0000047;6.95e-12;19!UBERON:0004088;6.95e-12;19!UBERON:0010230;6.95e-12;19!UBERON:0000970;2.29e-11;20!UBERON:0002104;6.74e-11;21!UBERON:0001456;6.74e-11;21!UBERON:0000020;4.42e-10;23!UBERON:0001032;1.01e-09;24!UBERON:0004456;1.01e-09;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000966,4.27e-34,6;UBERON:0005388,4.27e-34,6;UBERON:0001802,4.27e-34,6;UBERON:0000019,2.29e-11,20;UBERON:0000047,2.29e-11,20;UBERON:0010312,2.29e-11,20;UBERON:0004088,2.29e-11,20;UBERON:0010230,2.29e-11,20;UBERON:0003072,2.29e-11,20;UBERON:0004128,2.29e-11,20;UBERON:0003071,2.29e-11,20;UBERON:0000970,6.74e-11,21;UBERON:0002104,6.74e-11,21;UBERON:0001456,1.80e-10,22;UBERON:0000020,1.01e-09,24;UBERON:0001032,1.01e-09,24;UBERON:0004456,1.01e-09,24;UBERON:0005085,7.41e-08,31 | |||
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|short_description=p@chr12:208313..208318,+ | |short_description=p@chr12:208313..208318,+ | ||
}} | }} |
Latest revision as of 07:27, 24 July 2015
Short description: | p@chr12:208313..208318, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:208313..208318, + |
Coexpression cluster: | C41_retina_eye_medulla_Retinal_medulloblastoma_kidney_pineal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retina | 4.27e-34 | 6 |
photoreceptor array | 4.27e-34 | 6 |
posterior segment of eyeball | 4.27e-34 | 6 |
camera-type eye | 2.29e-11 | 20 |
simple eye | 2.29e-11 | 20 |
immature eye | 2.29e-11 | 20 |
ocular region | 2.29e-11 | 20 |
eyeball of camera-type eye | 2.29e-11 | 20 |
optic cup | 2.29e-11 | 20 |
optic vesicle | 2.29e-11 | 20 |
eye primordium | 2.29e-11 | 20 |
eye | 6.74e-11 | 21 |
visual system | 6.74e-11 | 21 |
face | 1.80e-10 | 22 |
sense organ | 1.01e-09 | 24 |
sensory system | 1.01e-09 | 24 |
entire sense organ system | 1.01e-09 | 24 |
ectodermal placode | 7.41e-08 | 31 |