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FFCP PHASE1:Hg19::chr6:105405037..105405048,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=389421
|EntrezGene=389421
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=32207
|HGNC=32207
|TSSclassifier=strong
|UniProt=Q6ZN17
|UniProt=Q6ZN17
|association_with_transcript=114bp_to_ENST00000345080,NM_001004317,uc003pqv.1_5end
|association_with_transcript=114bp_to_ENST00000345080,NM_001004317,uc003pqv.1_5end
|cluster_id=chr6:105405037..105405048,+
|coexpression_cluster_id=C1967
|coexpression_cluster_id=C1967
|description=CAGE_peak_10_at_LIN28B_5end
|description=CAGE_peak_10_at_LIN28B_5end
|id=chr6:105405037..105405048,+
|id=chr6:105405037..105405048,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=CL:0002322!1.12e-13!5;CL:0000039!2.15e-09!7;CL:0000586!2.15e-09!7
|ontology_enrichment_development=UBERON:0003918;2.51e-30;10!UBERON:0007687;2.51e-30;10!UBERON:0003104;3.83e-18;31
|ontology_enrichment_celltype_v019=
|ontology_enrichment_disease=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_uberon=UBERON:0002113;3.78e-13;24!UBERON:0011143;3.78e-13;24!UBERON:0000489;5.14e-11;29!UBERON:0006554;1.13e-10;30!UBERON:0001008;1.13e-10;30!UBERON:0005172;2.00e-08;52!UBERON:0005173;2.00e-08;52!UBERON:0002417;3.18e-08;58!UBERON:0000916;3.18e-08;58
|ontology_enrichment_development_v019=UBERON:0003918;2.51e-30;10!UBERON:0007687;2.51e-30;10!UBERON:0003104;3.83e-18;31
|ontology_enrichment_disease=DOID:3095!8.19e-24!22;DOID:2994!8.19e-24!22;DOID:171!4.27e-14!10;DOID:162!3.02e-11!235;DOID:14566!7.41e-11!239;DOID:169!9.16e-11!6;DOID:74!3.99e-09!2;DOID:1036!2.32e-08!8;DOID:2531!1.66e-07!51;DOID:0060083!1.66e-07!51;DOID:8692!3.40e-07!31;DOID:1240!6.47e-07!39;DOID:0050687!8.84e-07!143
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000473!3.16e-08!8;UBERON:0000013!1.21e-07!5;UBERON:0002410!1.21e-07!5
|ontology_enrichment_uberon_v019=UBERON:0002113;3.78e-13;24!UBERON:0011143;3.78e-13;24!UBERON:0000489;5.14e-11;29!UBERON:0006554;1.13e-10;30!UBERON:0001008;1.13e-10;30!UBERON:0005172;2.00e-08;52!UBERON:0005173;2.00e-08;52!UBERON:0002417;3.18e-08;58!UBERON:0000916;3.18e-08;58
|ontology_enrichment_uberon_v019_2=UBERON:0002113,3.25e-12,26;UBERON:0003918,3.25e-12,26;UBERON:0011143,3.25e-12,26;UBERON:0005095,3.25e-12,26;UBERON:0007687,3.25e-12,26;UBERON:0000489,2.29e-10,31;UBERON:0005172,2.40e-10,54;UBERON:0005173,2.40e-10,54;UBERON:0002417,2.30e-09,60;UBERON:0000916,2.30e-09,60;UBERON:0006554,4.50e-07,47;UBERON:0001008,6.12e-07,48
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0.348581828608555,0.725627385107593,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,1.70918513803957,0,0,0,0,0.284567373393656,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0.278406173895242,0,0.270455678475983,0.66614393599564,0,0,0,0,0,0,0,0,0,0,0,0,0,3.3780065300479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347249989866585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225595660617181,0.19606253431774,0.335643173951685,0.37950746544837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.81034942126376,1.24425829676697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577901179803038,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0.315132729228895,0.329663433524666,0.202210631562555,0,0.846733320657845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0.107824811396682,0.157265941855896,0.327628914576042,0.33946505990805,0.637724760305049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535701835878287,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3948971044175,0.869291361512897,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235676547101626,0,0,0,0,0,0,0.199882311849858,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0.327796715891087,0,0.101988829741982,0.534434810531121,0.275684698604535,0.250707539292375,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0.348581828608555,0.725627385107593,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,1.70918513803957,0,0,0,0,0.284567373393656,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0.278406173895242,0,0.270455678475983,0.66614393599564,0,0,0,0,0,0,0,0,0,0,0,0,0,3.3780065300479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347249989866585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225595660617181,0.19606253431774,0.335643173951685,0.37950746544837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.81034942126376,1.24425829676697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577901179803038,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0.315132729228895,0.329663433524666,0.202210631562555,0,0.846733320657845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0.107824811396682,0.157265941855896,0.327628914576042,0.33946505990805,0.637724760305049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535701835878287,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3948971044175,0.869291361512897,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235676547101626,0,0,0,0,0,0,0.199882311849858,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0.327796715891087,0,0.101988829741982,0.534434810531121,0.275684698604535,0.250707539292375,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
|short_description=p10@LIN28B
|short_description=p10@LIN28B
}}
}}

Latest revision as of 13:55, 19 September 2015

Short description:p10@LIN28B
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_10_at_LIN28B_5end
Coexpression cluster:C1967_anaplastic_embryonic_hepatoblastoma_chronic_hepatocellular_Wilms_hereditary
Association with transcript: 114bp_to_ENST00000345080, NM_001004317, uc003pqv.1_5end
EntrezGene:LIN28B
HGNC: 32207
UniProt: Q6ZN17
Genome view:ZENBU


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CAGE Expression




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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data