FFCP PHASE1:Hg19::chr14:38033393..38033405,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=141bp_to_ENST00000554829_5end | |association_with_transcript=141bp_to_ENST00000554829_5end | ||
|cluster_id=chr14:38033393..38033405,+ | |||
|coexpression_cluster_id=C245 | |coexpression_cluster_id=C245 | ||
|description=CAGE_peak_1_at_ENST00000554829_5end | |description=CAGE_peak_1_at_ENST00000554829_5end | ||
|id=chr14:38033393..38033405,+ | |id=chr14:38033393..38033405,+ | ||
|ontology_enrichment_celltype=CL:0000182;2.81e-19;12 | |ontology_enrichment_celltype=CL:0000181!1.05e-10!12;CL:0000417!1.05e-10!12;CL:0000668!1.05e-10!12;CL:0000414!1.05e-10!12;CL:0000412!1.05e-10!12;CL:0000182!1.05e-10!12;CL:0002274!6.18e-07!5;CL:0000457!6.18e-07!5;CL:0002191!6.18e-07!5;CL:0000097!6.18e-07!5;CL:0000831!6.18e-07!5;CL:0002028!6.18e-07!5 | ||
| | |ontology_enrichment_celltype_v019=CL:0000182;2.81e-19;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.90e-19,12 | |||
|ontology_enrichment_development_v019=UBERON:0004874;4.61e-26;1!UBERON:0006298;5.93e-26;1!UBERON:0009847;1.01e-09;3!UBERON:0003353;1.01e-09;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0000989;4.61e-26;1!UBERON:0008811;4.61e-26;1!UBERON:0001736;5.93e-26;1!UBERON:0002365;3.98e-20;31!UBERON:0002330;3.98e-20;31!UBERON:0001044;2.01e-17;6!UBERON:0003293;2.01e-17;6!UBERON:0003294;2.01e-17;6!UBERON:0010047;2.01e-17;6!UBERON:0003408;2.01e-17;6!UBERON:0000167;2.01e-17;6!UBERON:0001829;1.07e-13;2!UBERON:0002530;9.23e-13;57!UBERON:0002107;1.88e-12;19!UBERON:0006925;1.88e-12;19!UBERON:0002423;1.26e-09;25!UBERON:0001041;5.00e-08;14!UBERON:0002368;9.75e-08;33 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003127!1.00e-16!2;UBERON:0004921!2.74e-12!129;UBERON:0004185!2.74e-12!129;UBERON:0002365!1.12e-11!31;UBERON:0002330!1.12e-11!31;UBERON:0002530!1.25e-11!59;UBERON:0000077!1.23e-10!130;UBERON:0003929!2.56e-10!54;UBERON:0002107!3.45e-10!19;UBERON:0006925!3.45e-10!19;UBERON:0008836!3.45e-10!19;UBERON:0001007!9.56e-10!155;UBERON:0001555!9.56e-10!155;UBERON:0007026!9.56e-10!155;UBERON:0005911!1.54e-09!82;UBERON:0000989!2.04e-09!1;UBERON:0008811!2.04e-09!1;UBERON:0006258!2.04e-09!1;UBERON:0005876!2.04e-09!1;UBERON:0004874!2.04e-09!1;UBERON:0001736!2.22e-09!1;UBERON:0006298!2.22e-09!1;UBERON:0006122!2.60e-09!1;UBERON:0002171!5.31e-09!1;UBERON:0006518!5.31e-09!1;UBERON:0008949!5.31e-09!1;UBERON:0000101!5.31e-09!1;UBERON:0002167!5.31e-09!1;UBERON:0007023!5.38e-09!115;UBERON:0000162!6.29e-09!14;UBERON:0001353!6.29e-09!14;UBERON:0000163!6.29e-09!14;UBERON:0006866!6.29e-09!14;UBERON:0000164!6.29e-09!14;UBERON:0000931!6.29e-09!14;UBERON:0008835!9.02e-09!22;UBERON:0003894!9.02e-09!22;UBERON:0004119!1.06e-08!169;UBERON:0000925!1.06e-08!169;UBERON:0006595!1.06e-08!169;UBERON:0009854!2.22e-08!23;UBERON:0004122!2.43e-08!15;UBERON:0001041!9.36e-08!98;UBERON:0007499!1.08e-07!25;UBERON:0009497!1.08e-07!25;UBERON:0000015!1.08e-07!25;UBERON:0002423!1.08e-07!25;UBERON:0006235!1.08e-07!25;UBERON:0004161!1.08e-07!25;UBERON:0000161!1.72e-07!35;UBERON:0005057!2.18e-07!26;UBERON:0009856!2.18e-07!26;UBERON:0002367!7.21e-07!11;UBERON:0010147!7.21e-07!11;UBERON:0009846!7.21e-07!11;UBERON:0003353!7.21e-07!11;UBERON:0004902!7.21e-07!11;UBERON:0003820!7.21e-07!11;UBERON:0009847!7.21e-07!11;UBERON:0005177!7.34e-07!107;UBERON:0000466!9.35e-07!126 | |||
|ontology_enrichment_uberon_v019=UBERON:0000989;4.61e-26;1!UBERON:0008811;4.61e-26;1!UBERON:0001736;5.93e-26;1!UBERON:0002365;3.98e-20;31!UBERON:0002330;3.98e-20;31!UBERON:0001044;2.01e-17;6!UBERON:0003293;2.01e-17;6!UBERON:0003294;2.01e-17;6!UBERON:0010047;2.01e-17;6!UBERON:0003408;2.01e-17;6!UBERON:0000167;2.01e-17;6!UBERON:0001829;1.07e-13;2!UBERON:0002530;9.23e-13;57!UBERON:0002107;1.88e-12;19!UBERON:0006925;1.88e-12;19!UBERON:0002423;1.26e-09;25!UBERON:0001041;5.00e-08;14!UBERON:0002368;9.75e-08;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000989,4.61e-26,1;UBERON:0008811,4.61e-26,1;UBERON:0006258,4.61e-26,1;UBERON:0005876,4.61e-26,1;UBERON:0004874,4.61e-26,1;UBERON:0001736,5.93e-26,1;UBERON:0006298,5.93e-26,1;UBERON:0002365,3.56e-20,31;UBERON:0002330,3.56e-20,31;UBERON:0001044,2.01e-17,6;UBERON:0003293,2.01e-17,6;UBERON:0003294,2.01e-17,6;UBERON:0010047,2.01e-17,6;UBERON:0000167,2.01e-17,6;UBERON:0002530,3.01e-15,59;UBERON:0001829,1.07e-13,2;UBERON:0002107,1.91e-12,19;UBERON:0006925,1.91e-12,19;UBERON:0008836,1.91e-12,19;UBERON:0003408,7.30e-11,10;UBERON:0008835,7.66e-11,22;UBERON:0003894,7.66e-11,22;UBERON:0009854,2.12e-10,23;UBERON:0007499,1.28e-09,25;UBERON:0009497,1.28e-09,25;UBERON:0000015,1.28e-09,25;UBERON:0002423,1.28e-09,25;UBERON:0006235,1.28e-09,25;UBERON:0004161,1.28e-09,25;UBERON:0009856,2.82e-09,26;UBERON:0003929,8.31e-08,54;UBERON:0004921,1.36e-07,118;UBERON:0001041,2.42e-07,87;UBERON:0002368,4.78e-07,35;UBERON:0000161,7.08e-07,36 | |||
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|short_description=p1@ENST00000554829 | |short_description=p1@ENST00000554829 | ||
}} | }} |
Latest revision as of 20:34, 24 July 2015
Short description: | p1@ENST00000554829 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000554829_5end |
Coexpression cluster: | C245_prostate_penis_salivary_esophagus_kidney_Neutrophils_Pancreatic |
Association with transcript: | 141bp_to_ENST00000554829_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.90e-19 | 12 |
Ontology term | p-value | n |
---|---|---|
penis | 4.61e-26 | 1 |
intromittent organ | 4.61e-26 | 1 |
lateral plate mesenchyme | 4.61e-26 | 1 |
undifferentiated genital tubercle | 4.61e-26 | 1 |
somatopleure | 4.61e-26 | 1 |
submandibular gland | 5.93e-26 | 1 |
submandibular gland primordium | 5.93e-26 | 1 |
exocrine gland | 3.56e-20 | 31 |
exocrine system | 3.56e-20 | 31 |
saliva-secreting gland | 2.01e-17 | 6 |
gland of oral region | 2.01e-17 | 6 |
gland of foregut | 2.01e-17 | 6 |
oral gland | 2.01e-17 | 6 |
oral cavity | 2.01e-17 | 6 |
gland | 3.01e-15 | 59 |
major salivary gland | 1.07e-13 | 2 |
liver | 1.91e-12 | 19 |
digestive gland | 1.91e-12 | 19 |
liver bud | 1.91e-12 | 19 |
gland of gut | 7.30e-11 | 10 |
hepatic diverticulum | 7.66e-11 | 22 |
liver primordium | 7.66e-11 | 22 |
digestive tract diverticulum | 2.12e-10 | 23 |
epithelial sac | 1.28e-09 | 25 |
epithelium of foregut-midgut junction | 1.28e-09 | 25 |
anatomical boundary | 1.28e-09 | 25 |
hepatobiliary system | 1.28e-09 | 25 |
foregut-midgut junction | 1.28e-09 | 25 |
septum transversum | 1.28e-09 | 25 |
sac | 2.82e-09 | 26 |
gut epithelium | 8.31e-08 | 54 |
subdivision of digestive tract | 1.36e-07 | 118 |
foregut | 2.42e-07 | 87 |
endocrine gland | 4.78e-07 | 35 |
orifice | 7.08e-07 | 36 |