FFCP PHASE1:Hg19::chr14:55196050..55196062,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:55196050..55196062,- | |||
|coexpression_cluster_id=C14 | |coexpression_cluster_id=C14 | ||
|description=CAGE_peak_at_chr14:55196050..55196062,- | |description=CAGE_peak_at_chr14:55196050..55196062,- | ||
|id=chr14:55196050..55196062,- | |id=chr14:55196050..55196062,- | ||
|ontology_enrichment_celltype=CL:0000775;2.39e-17;3!CL:0000094;2.13e-14;8!CL:0000081;1.23e-10;11!CL:0000771;2.05e-07;2 | |ontology_enrichment_celltype=CL:0000094!4.85e-19!8;CL:0000842!6.94e-19!3;CL:0000224!2.62e-14!4;CL:0000081!8.42e-14!11;CL:0000080!1.04e-09!6;CL:0000775!2.53e-09!3;CL:0000767!6.22e-09!3;CL:0000623!8.23e-09!3;CL:0000825!8.23e-09!3;CL:0000037!1.12e-08!172;CL:0000566!1.12e-08!172;CL:0000988!5.37e-08!182 | ||
| | |ontology_enrichment_celltype_v019=CL:0000775;2.39e-17;3!CL:0000094;2.13e-14;8!CL:0000081;1.23e-10;11!CL:0000771;2.05e-07;2 | ||
|ontology_enrichment_disease=DOID:1036;2.50e-14;8 | |ontology_enrichment_celltype_v019_2=CL:0000775,2.30e-17,3;CL:0000094,2.13e-14,8;CL:0000081,1.23e-10,11;CL:0000771,2.12e-07,2 | ||
|ontology_enrichment_uberon=UBERON:0000178;8.45e-67;15!UBERON:0000179;8.45e-67;15!UBERON:0000463;8.45e-67;15!UBERON:0002390;3.08e-28;32!UBERON:0002193;1.09e-15;42 | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:1036!1.79e-12!8 | |||
|ontology_enrichment_disease_v019=DOID:1036;2.50e-14;8 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,2.33e-14,8 | |||
|ontology_enrichment_uberon=UBERON:0000178!2.08e-58!15;UBERON:0000179!2.08e-58!15;UBERON:0000463!2.08e-58!15;UBERON:0002390!1.80e-10!102;UBERON:0003061!1.80e-10!102;UBERON:0002193!2.81e-09!112;UBERON:0002106!1.33e-08!3;UBERON:0004854!1.33e-08!3;UBERON:0009034!1.33e-08!3;UBERON:0002095!1.33e-08!3;UBERON:0004782!1.33e-08!3;UBERON:0003281!1.33e-08!3;UBERON:0009664!1.33e-08!3;UBERON:0002296!1.33e-08!3;UBERON:0005602!1.33e-08!3;UBERON:0001179!1.33e-08!3;UBERON:0006293!1.33e-08!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;8.45e-67;15!UBERON:0000179;8.45e-67;15!UBERON:0000463;8.45e-67;15!UBERON:0002390;3.08e-28;32!UBERON:0002193;1.09e-15;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,8.46e-67,15;UBERON:0000179,8.46e-67,15;UBERON:0000463,8.46e-67,15;UBERON:0002390,2.59e-09,98;UBERON:0003061,2.59e-09,98;UBERON:0004535,2.33e-08,109;UBERON:0002193,2.33e-08,108;UBERON:0001009,4.17e-08,112;UBERON:0007023,6.05e-08,114 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0.383829398097213,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,1.14950487990897,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.215627574859517,0,0,0,0,0,0,1.49801404789436,0,2.48649308061621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82707210449155,0.862856803274467,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.11916174771471,8.41100927856613,8.54470780761244,10.9586616710583,15.2204041041892,7.13320642311989,6.48037724685738,8.72437693923697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556812347790485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.974154617347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1279783030859,1.56850027454192,1.84603745673427,0.189753732724185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0.383829398097213,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,1.14950487990897,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.215627574859517,0,0,0,0,0,0,1.49801404789436,0,2.48649308061621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82707210449155,0.862856803274467,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.11916174771471,8.41100927856613,8.54470780761244,10.9586616710583,15.2204041041892,7.13320642311989,6.48037724685738,8.72437693923697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556812347790485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.974154617347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1279783030859,1.56850027454192,1.84603745673427,0.189753732724185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr14:55196050..55196062,- | |short_description=p@chr14:55196050..55196062,- | ||
}} | }} |
Latest revision as of 21:13, 24 July 2015
Short description: | p@chr14:55196050..55196062, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:55196050..55196062, - |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 2.30e-17 | 3 |
granulocyte | 2.13e-14 | 8 |
blood cell | 1.23e-10 | 11 |
eosinophil | 2.12e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 8.46e-67 | 15 |
haemolymphatic fluid | 8.46e-67 | 15 |
organism substance | 8.46e-67 | 15 |
hematopoietic system | 2.59e-09 | 98 |
blood island | 2.59e-09 | 98 |
cardiovascular system | 2.33e-08 | 109 |
hemolymphoid system | 2.33e-08 | 108 |
circulatory system | 4.17e-08 | 112 |
adult organism | 6.05e-08 | 114 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 2.33e-14 | 8 |