FFCP PHASE1:Hg19::chr1:190446698..190446710,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=339479 | |EntrezGene=339479 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=22393 | |HGNC=22393 | ||
|TSSclassifier=strong | |||
|UniProt=Q76B58 | |UniProt=Q76B58 | ||
|association_with_transcript=48bp_to_ENST00000367462,NM_199051,uc001gse.1_5end | |association_with_transcript=48bp_to_ENST00000367462,NM_199051,uc001gse.1_5end | ||
|cluster_id=chr1:190446698..190446710,- | |||
|coexpression_cluster_id=C108 | |coexpression_cluster_id=C108 | ||
|description=CAGE_peak_10_at_FAM5C_5end | |description=CAGE_peak_10_at_FAM5C_5end | ||
|id=chr1:190446698..190446710,- | |id=chr1:190446698..190446710,- | ||
|ontology_enrichment_celltype=CL:0002327;1.70e-08;4 | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019=CL:0002327;1.70e-08;4 | ||
|ontology_enrichment_disease=DOID:5093;1.70e-08;4!DOID:1612;1.70e-08;4 | |ontology_enrichment_celltype_v019_2=CL:0002327,1.70e-08,4 | ||
|ontology_enrichment_uberon=UBERON:0002021;2.27e-23;5!UBERON:0001911;1.70e-08;4 | |ontology_enrichment_development_v019=UBERON:0008425;7.48e-30;1!UBERON:0006215;1.09e-10;3 | ||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5093;1.70e-08;4!DOID:1612;1.70e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,1.70e-08,4;DOID:1612,1.70e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.49e-49!57;UBERON:0005068!1.49e-49!57;UBERON:0006241!1.49e-49!57;UBERON:0007135!1.49e-49!57;UBERON:0002619!3.71e-48!22;UBERON:0001893!5.28e-48!34;UBERON:0001950!1.37e-47!20;UBERON:0001869!3.12e-47!32;UBERON:0002780!7.80e-46!41;UBERON:0001890!7.80e-46!41;UBERON:0006240!7.80e-46!41;UBERON:0002791!2.30e-45!33;UBERON:0003080!1.33e-44!42;UBERON:0002616!2.96e-44!59;UBERON:0002020!5.62e-44!34;UBERON:0003528!5.62e-44!34;UBERON:0000956!5.42e-42!25;UBERON:0000203!5.42e-42!25;UBERON:0000955!1.35e-41!69;UBERON:0006238!1.35e-41!69;UBERON:0001017!7.35e-39!82;UBERON:0000073!1.13e-36!94;UBERON:0001016!1.13e-36!94;UBERON:0005743!1.14e-36!86;UBERON:0003075!1.98e-32!86;UBERON:0007284!1.98e-32!86;UBERON:0002346!1.28e-30!90;UBERON:0003056!9.34e-29!61;UBERON:0007023!2.43e-23!115;UBERON:0000153!2.13e-21!129;UBERON:0007811!2.13e-21!129;UBERON:0000033!2.59e-21!123;UBERON:0004121!4.07e-19!169;UBERON:0000924!1.85e-18!173;UBERON:0006601!1.85e-18!173;UBERON:0002021!2.13e-17!5;UBERON:0001872!2.17e-16!5;UBERON:0001737!3.87e-16!9;UBERON:0001871!2.01e-14!7;UBERON:0000200!2.57e-13!6;UBERON:0000025!1.73e-12!194;UBERON:0000064!7.25e-12!219;UBERON:0000477!7.30e-12!286;UBERON:0002771!2.65e-10!3;UBERON:0000481!2.96e-09!347;UBERON:0004111!4.34e-09!241;UBERON:0000475!9.05e-08!365;UBERON:0000369!2.02e-07!4;UBERON:0002435!2.02e-07!4;UBERON:0000204!2.02e-07!4;UBERON:0010082!2.02e-07!4;UBERON:0003076!2.48e-07!15;UBERON:0003057!2.48e-07!15;UBERON:0001557!4.05e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0002021;2.27e-23;5!UBERON:0001911;1.70e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,2.54e-23,5;UBERON:0001911,1.70e-08,4;UBERON:0005333,1.70e-08,4;UBERON:0008425,1.70e-08,4;UBERON:0005311,1.70e-08,4;UBERON:0000955,6.64e-07,68;UBERON:0006238,6.64e-07,68 | |||
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| ||
|short_description=p10@FAM5C | |short_description=p10@FAM5C | ||
}} | }} |
Latest revision as of 09:14, 19 September 2015
Short description: | p10@FAM5C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_FAM5C_5end |
Coexpression cluster: | C108_breast_hepatoblastoma_MCF7_parotid_salivary_submaxillary_prostate |
Association with transcript: | 48bp_to_ENST00000367462, NM_199051, uc001gse.1_5end |
EntrezGene: | FAM5C |
HGNC: | 22393 |
UniProt: | Q76B58 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mammary gland epithelial cell | 1.70e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
occipital lobe | 2.54e-23 | 5 |
mammary gland | 1.70e-08 | 4 |
mammary bud | 1.70e-08 | 4 |
mammary ridge | 1.70e-08 | 4 |
mammary placode | 1.70e-08 | 4 |
brain | 6.64e-07 | 68 |
future brain | 6.64e-07 | 68 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.70e-08 | 4 |
breast cancer | 1.70e-08 | 4 |