FFCP PHASE1:Hg19::chr20:6103778..6103792,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55612 | |EntrezGene=55612 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15889 | |HGNC=15889 | ||
|TSSclassifier=strong | |||
|UniProt=G3V1L6 | |UniProt=G3V1L6 | ||
|association_with_transcript=-101bp_to_ENST00000536936_5end | |association_with_transcript=-101bp_to_ENST00000536936_5end | ||
|cluster_id=chr20:6103778..6103792,- | |||
|coexpression_cluster_id=C1483 | |coexpression_cluster_id=C1483 | ||
|description=CAGE_peak_4_at_FERMT1_5end | |description=CAGE_peak_4_at_FERMT1_5end | ||
|id=chr20:6103778..6103792,- | |id=chr20:6103778..6103792,- | ||
|ontology_enrichment_celltype=CL:0002076;3.25e-16;42!CL:0002368;3.88e-13;13!CL:0002251;3.80e-12;20!CL:0002159;2.21e-09;14!CL:0000154;5.00e-09;6!CL:0002202;5.65e-08;9!CL:0002632;5.65e-08;9!CL:0000622;6.56e-08;5!CL:0000244;9.30e-07;4!CL:0000731;9.30e-07;4 | |ontology_enrichment_celltype=CL:0002076!3.94e-14!43;CL:0000223!1.16e-11!59;CL:0000066!3.97e-11!254;CL:0002251!6.79e-10!21;CL:0002368!1.03e-08!13 | ||
| | |ontology_enrichment_celltype_v019=CL:0002076;3.25e-16;42!CL:0002368;3.88e-13;13!CL:0002251;3.80e-12;20!CL:0002159;2.21e-09;14!CL:0000154;5.00e-09;6!CL:0002202;5.65e-08;9!CL:0002632;5.65e-08;9!CL:0000622;6.56e-08;5!CL:0000244;9.30e-07;4!CL:0000731;9.30e-07;4 | ||
|ontology_enrichment_disease=DOID:1749;1.08e-09;14 | |ontology_enrichment_celltype_v019_2=CL:0002076,1.06e-21,42;CL:0000223,1.79e-21,58;CL:0000066,7.18e-18,253;CL:0002368,4.10e-13,13;CL:0002251,1.48e-12,20;CL:0002159,2.28e-09,14;CL:0000154,5.76e-09,6;CL:0002202,5.88e-08,9;CL:0002632,5.88e-08,9;CL:0000622,7.27e-08,5;CL:0002321,4.37e-07,250;CL:0000244,8.95e-07,4;CL:0000731,8.95e-07,4 | ||
|ontology_enrichment_uberon=UBERON:0001264;4.65e-08;10!UBERON:0000365;5.47e-08;5!UBERON:0000486;1.87e-07;12!UBERON:0000344;3.56e-07;20!UBERON:0002075;5.56e-07;18 | |ontology_enrichment_development_v019=CL:0000223;3.28e-11;58 | ||
|ontology_enrichment_disease=DOID:1749!1.24e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.08e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.15e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0004119!6.95e-16!169;UBERON:0000925!6.95e-16!169;UBERON:0006595!6.95e-16!169;UBERON:0000481!8.18e-15!347;UBERON:0000475!2.59e-13!365;UBERON:0001007!1.07e-11!155;UBERON:0001555!1.07e-11!155;UBERON:0007026!1.07e-11!155;UBERON:0001004!9.86e-11!72;UBERON:0000064!3.05e-10!219;UBERON:0000922!3.33e-10!612;UBERON:0003104!8.67e-10!238;UBERON:0009142!8.67e-10!238;UBERON:0000480!1.24e-09!626;UBERON:0000467!1.42e-09!625;UBERON:0002050!1.46e-09!605;UBERON:0005423!1.46e-09!605;UBERON:0000077!1.99e-09!130;UBERON:0000923!2.87e-09!604;UBERON:0005291!2.87e-09!604;UBERON:0006598!2.87e-09!604;UBERON:0002532!2.87e-09!604;UBERON:0000483!3.24e-09!309;UBERON:0000468!4.91e-09!659;UBERON:0000119!7.02e-09!312;UBERON:0000065!3.73e-08!53;UBERON:0004921!5.50e-08!129;UBERON:0004185!5.50e-08!129;UBERON:0000477!2.35e-07!286;UBERON:0000062!2.88e-07!511;UBERON:0003102!4.86e-07!95;UBERON:0000344!5.80e-07!12;UBERON:0004111!7.35e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0001264;4.65e-08;10!UBERON:0000365;5.47e-08;5!UBERON:0000486;1.87e-07;12!UBERON:0000344;3.56e-07;20!UBERON:0002075;5.56e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,3.28e-09,160;UBERON:0000925,3.28e-09,160;UBERON:0006595,3.28e-09,160;UBERON:0001264,2.99e-08,10;UBERON:0000365,5.19e-08,5;UBERON:0003102,1.02e-07,99;UBERON:0000344,1.58e-07,20;UBERON:0002075,4.81e-07,18;UBERON:0001004,7.30e-07,74 | |||
|phase1_expression=0,0,0.281908808191942,0,0.446961094427288,0,0,1.26343974685366,0.783556884599516,0.245733936501509,0.697801167972428,4.80571018686379,2.37390280405608,0,0,0.672325146451775,0.602694528023977,0,0.487932798790507,0,0,0,0.572471974262113,0.273748850145768,0.125542639594803,0.916960868975415,0.738905305049512,0.393553906568396,0,0,0,10.1136334692682,9.0361775633475,10.7228662948368,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511450247374121,0.361439152384566,0,0.144846518960824,0,0,0.283604451492204,0.443458794925128,0.263504357079378,0.458426764241994,4.73583874780305,5.19098219898201,0.649094787309367,0.870648686496336,0.664789802594326,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0.24406205754817,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,4.79703457356788,0,0.886413581652058,0.794455084879313,0.286836620748814,1.06400514659507,0.560677600142307,1.06748995729705,0.24666754841716,0,0.134710672069688,0.326923806226917,0,0,0,2.49728061464256,1.1409436430889,1.04614076386261,0.117434498643765,0,0.140450806702248,0.408308342509787,0.368502951935304,0.103325781175765,0,0.247266929278557,0,0,0.673344455816265,0.125118519871964,0.554128230968366,0.438977620880838,0.30648779579902,0.45071417671979,0.113432183160021,0,0,0.211931901159562,0,0.206105058476878,0.772921620136887,0.37223371266318,0.337552664482532,0.0974370051611986,0,0.0920498986422993,0,0,0,0.169560592310488,19.9058678758196,14.4555443913142,20.0763216772303,1.09776335516636,0.530119073285941,0.116193942869518,0.932949495138334,1.26160425437814,0.72995471815166,0,0,0,0.464367928031979,0,1.0647612003586,1.34867752062481,1.20505514941741,1.65440959098591,0.871517776369625,1.18635309555548,0.943819157121151,0.784885860501384,0.769494313892781,0,0,0,0,0,0,0,0,1.8448265781467,0.343135620597051,15.0357891009817,5.62008766288098,19.8042075650913,5.64789515467031,0,0,0,0.231860809950154,0.234817388471643,0,0,0,0,0.858486162094873,0,0,0,7.49870671894216,5.54341023056236,3.40260233381728,21.6731624940893,13.0785272331283,11.1180976957911,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0.1466765716419,0,0,0,0,0,0,1.41849132023278,0.799266537048298,0,0,0,0.977208552881205,0,0.791951872933429,0,0,0.199945982364114,0,0,0,0,0,1.42636905040718,0.434343920002738,0,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0.117141414992713,0.300946099727719,0,0,3.32112799267718,0.921845842708516,0.0868836144680828,0,0,0,0,0,0.303127571446259,1.66435439510497,0.907170879989041,0.496215615637554,0,0,0,0,1.28683136914886,0,1.85051632563187,4.43904313282818,5.99528238900807,0,1.97557643381931,1.0877350463246,7.01772646061497,9.85266581614091,0.803701137152247,0.728364672026868,0.786746489756545,0.451199612907412,0.15403067420883,0,1.46139224653261,0.844413031143006,0,0,0.215915916102139,0,0.541892875087706,0,1.27438136522519,0.831076008928724,0.447749509444357,0,0,0,0,0,0.309123034943167,0,0.165018999841176,7.46545199395024,8.45078319847478,3.21367859688319,0.48335359146061,0.924291702687866,1.5350367472613,0.413509717453592,0.107420244868274,0.435050081742686,1.87498580315422,0.356128142586949,11.7352289906294,18.6424365344153,7.91198817466422,9.20535805785504,0,0.31481234683064,1.3940745403212,0.924100740528266,1.59691809095107,1.73986598415015,0.74129687641568,0.286249773483982,0,0,0.38126038784765,0.511795582622668,0,0.318203247925937,0.78494864019923,0,0.54907405947211,0.824686816419805,1.2130948894399,0,1.26377536871694,0,1.94970791705028,0,0,0.141405431953713,1.13008116620243,1.10273068709225,0.66343897524122,1.75380354101505,0.578775534266688,0.655894752046633,0.811641507850816,0.92947049429925,0,0.717056761020258,0.196498082026242,0,0,0,0.329294892959902,0,0.349934720244983,16.9350918396901,5.3624182042863,9.80018863751903,0.282431402330337,9.04061282609583,8.42357378338128,7.98174276366016,4.82419140434615,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0.324621940274555,0.280797178113459,0.456469358066384,0,0,0,0,0,0,0.343505344755765,0,0,0,0.781552381608161,0,1.23087398947712,0,0,1.4098700508785,1.30998378285754,0,0,0.111443384277478,2.55722532125772,1.67121139316383,0,0.307160702099232,0.994147647766298,0.844016498463076,0.222617410045812,0,12.6675244876796,0.19924798825107,0,0,0.20453736500431,0,0,0.988551862620595,0,0,0,0,1.11136990144637,1.93866549219044,0.371072392647405,0,0.260427761085233,0,0,0.455173793141999,0.254253650292766,0,0,0,0,0.885741385813839,0.60298219312704,0,0.442317039724898,0,0.219385397153973,0.21787692703798,4.60098356119391,0.846452843541768,0,0.69169171316418,2.15418346583453,0.760531603454056,1.27600463892768,0.915975934018623,1.06606955203727,0,0.941881538370149,0,0,0,0,0,0.476809736941136,0.210998064528027,0,0.848118428603645,1.73110911793673,0,1.32686346755009,0,1.77912677208373,3.21266241260907,3.65476823269094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| ||
|short_description=p4@FERMT1 | |short_description=p4@FERMT1 | ||
}} | }} |
Latest revision as of 10:40, 17 September 2015
Short description: | p4@FERMT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_FERMT1_5end |
Coexpression cluster: | C1483_Gingival_Keratinocyte_Mammary_Prostate_Tracheal_Small_embryonic |
Association with transcript: | -101bp_to_ENST00000536936_5end |
EntrezGene: | FERMT1 |
HGNC: | 15889 |
UniProt: | G3V1L6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 1.06e-21 | 42 |
endodermal cell | 1.79e-21 | 58 |
epithelial cell | 7.18e-18 | 253 |
respiratory epithelial cell | 4.10e-13 | 13 |
epithelial cell of alimentary canal | 1.48e-12 | 20 |
general ecto-epithelial cell | 2.28e-09 | 14 |
protein secreting cell | 5.76e-09 | 6 |
epithelial cell of tracheobronchial tree | 5.88e-08 | 9 |
epithelial cell of lower respiratory tract | 5.88e-08 | 9 |
acinar cell | 7.27e-08 | 5 |
embryonic cell | 4.37e-07 | 250 |
transitional epithelial cell | 8.95e-07 | 4 |
urothelial cell | 8.95e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 3.28e-09 | 160 |
endoderm | 3.28e-09 | 160 |
presumptive endoderm | 3.28e-09 | 160 |
pancreas | 2.99e-08 | 10 |
urothelium | 5.19e-08 | 5 |
surface structure | 1.02e-07 | 99 |
mucosa | 1.58e-07 | 20 |
viscus | 4.81e-07 | 18 |
respiratory system | 7.30e-07 | 74 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.15e-09 | 14 |