FFCP PHASE1:Hg19::chr7:139227335..139227349,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:139227335..139227349,+ | |||
|description=CAGE_peak_at_chr7:139227335..139227349,+ | |description=CAGE_peak_at_chr7:139227335..139227349,+ | ||
|id=chr7:139227335..139227349,+ | |id=chr7:139227335..139227349,+ | ||
|ontology_enrichment_celltype=CL:0000082;5.73e-08;19 | |ontology_enrichment_celltype=CL:0000039!4.75e-14!7;CL:0000586!4.75e-14!7;CL:0002149!5.95e-08!6;CL:0002255!5.95e-08!6 | ||
| | |ontology_enrichment_celltype_v019=CL:0000082;5.73e-08;19 | ||
|ontology_enrichment_disease=DOID:1325;7.13e-20;7!DOID:3904;7.13e-20;7!DOID:1324;7.75e-10;15!DOID:5409;1.22e-09;4!DOID:0050615;2.77e-09;16 | |ontology_enrichment_celltype_v019_2=CL:0000082,5.73e-08,19 | ||
|ontology_enrichment_uberon=UBERON:0005911;4.56e-09;36!UBERON:0004802;5.73e-08;19!UBERON:0000115;5.73e-08;19!UBERON:0002048;5.24e-07;22!UBERON:0004807;5.24e-07;22!UBERON:0000117;5.24e-07;22!UBERON:0000171;5.24e-07;22!UBERON:0000170;5.24e-07;22!UBERON:0005910;9.23e-07;6 | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:0060085!6.97e-12!1;DOID:3165!6.97e-12!1;DOID:0060121!6.97e-12!1;DOID:2438!6.97e-12!1;DOID:4418!6.97e-12!1;DOID:0050687!1.61e-10!143;DOID:162!4.32e-09!235;DOID:14566!7.49e-09!239;DOID:305!1.36e-08!106;DOID:3001!5.95e-08!6;DOID:1325!4.08e-07!7;DOID:3904!4.08e-07!7 | |||
|ontology_enrichment_disease_v019=DOID:1325;7.13e-20;7!DOID:3904;7.13e-20;7!DOID:1324;7.75e-10;15!DOID:5409;1.22e-09;4!DOID:0050615;2.77e-09;16 | |||
|ontology_enrichment_disease_v019_2=DOID:1325,7.13e-20,7;DOID:3904,7.13e-20,7;DOID:1324,7.75e-10,15;DOID:5409,1.22e-09,4;DOID:0050615,2.77e-09,16 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0005911;4.56e-09;36!UBERON:0004802;5.73e-08;19!UBERON:0000115;5.73e-08;19!UBERON:0002048;5.24e-07;22!UBERON:0004807;5.24e-07;22!UBERON:0000117;5.24e-07;22!UBERON:0000171;5.24e-07;22!UBERON:0000170;5.24e-07;22!UBERON:0005910;9.23e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004802,5.73e-08,19;UBERON:0000115,5.73e-08,19;UBERON:0002048,5.24e-07,22;UBERON:0000117,5.24e-07,22;UBERON:0000171,5.24e-07,22;UBERON:0000170,5.24e-07,22;UBERON:0005597,5.24e-07,22;UBERON:0000118,5.24e-07,22;UBERON:0005910,9.49e-07,6 | |||
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|short_description=p@chr7:139227335..139227349,+ | |short_description=p@chr7:139227335..139227349,+ | ||
}} | }} |
Latest revision as of 06:35, 31 July 2015
Short description: | p@chr7:139227335..139227349, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:139227335..139227349, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of lung | 5.73e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
respiratory tract epithelium | 5.73e-08 | 19 |
lung epithelium | 5.73e-08 | 19 |
lung | 5.24e-07 | 22 |
respiratory tube | 5.24e-07 | 22 |
respiration organ | 5.24e-07 | 22 |
pair of lungs | 5.24e-07 | 22 |
lung primordium | 5.24e-07 | 22 |
lung bud | 5.24e-07 | 22 |
transitional epithelium | 9.49e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
bronchus cancer | 7.13e-20 | 7 |
bronchogenic carcinoma | 7.13e-20 | 7 |
lung cancer | 7.75e-10 | 15 |
lung small cell carcinoma | 1.22e-09 | 4 |
respiratory system cancer | 2.77e-09 | 16 |