FFCP PHASE1:Hg19::chr10:180364..180371,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10771 | |EntrezGene=10771 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16966 | |HGNC=16966 | ||
|TSSclassifier=strong | |||
|UniProt=E9PE09,Q15326,Q2LD48,Q5BJG6,Q5UGI2 | |UniProt=E9PE09,Q15326,Q2LD48,Q5BJG6,Q5UGI2 | ||
|association_with_transcript=-33bp_to_ENST00000439456,NM_006624_5end | |association_with_transcript=-33bp_to_ENST00000439456,NM_006624_5end | ||
|cluster_id=chr10:180364..180371,+ | |||
|coexpression_cluster_id=C84 | |coexpression_cluster_id=C84 | ||
|description=CAGE_peak_22_at_ZMYND11_5end | |description=CAGE_peak_22_at_ZMYND11_5end | ||
|id=chr10:180364..180371,+ | |id=chr10:180364..180371,+ | ||
|ontology_enrichment_celltype=CL:0000039;1.28e-23;7!CL:0000586;1.28e-23;7!CL:0002253;5.69e-21;2!CL:0000083;2.80e-11;4!CL:0002563;3.42e-11;4 | |ontology_enrichment_celltype=CL:0000039!6.75e-10!7;CL:0000586!6.75e-10!7 | ||
| | |ontology_enrichment_celltype_v019=CL:0000039;1.28e-23;7!CL:0000586;1.28e-23;7!CL:0002253;5.69e-21;2!CL:0000083;2.80e-11;4!CL:0002563;3.42e-11;4 | ||
|ontology_enrichment_disease=DOID:1799;9.91e-41;1!DOID:10165;9.91e-41;1!DOID:1798;9.91e-41;1!DOID:3307;5.69e-21;2!DOID:3095;5.41e-17;22!DOID:2994;5.41e-17;22!DOID:1793;2.80e-11;4!DOID:170;5.92e-08;6 | |ontology_enrichment_celltype_v019_2=CL:0000039,1.28e-23,7;CL:0000586,1.28e-23,7;CL:0002253,4.66e-21,2;CL:0000083,2.80e-11,4;CL:0002563,3.10e-11,4 | ||
|ontology_enrichment_uberon=UBERON:0001052;3.42e-11;4!UBERON:0001242;3.42e-11;4!UBERON:0001262;3.42e-11;4!UBERON:0004786;3.42e-11;4!UBERON:0004808;3.42e-11;4!UBERON:0001277;3.42e-11;4!UBERON:0004907;3.22e-09;5!UBERON:0000485;6.04e-07;7!UBERON:0003929;6.04e-07;7 | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1799;9.91e-41;1!DOID:10165;9.91e-41;1!DOID:1798;9.91e-41;1!DOID:3307;5.69e-21;2!DOID:3095;5.41e-17;22!DOID:2994;5.41e-17;22!DOID:1793;2.80e-11;4!DOID:170;5.92e-08;6 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,9.91e-41,1;DOID:10165,9.91e-41,1;DOID:1798,9.91e-41,1;DOID:3307,6.96e-21,2;DOID:3095,5.72e-17,22;DOID:2994,5.72e-17,22;DOID:1793,2.80e-11,4;DOID:170,5.92e-08,6;DOID:0050687,1.55e-07,143 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001052;3.42e-11;4!UBERON:0001242;3.42e-11;4!UBERON:0001262;3.42e-11;4!UBERON:0004786;3.42e-11;4!UBERON:0004808;3.42e-11;4!UBERON:0001277;3.42e-11;4!UBERON:0004907;3.22e-09;5!UBERON:0000485;6.04e-07;7!UBERON:0003929;6.04e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001052,3.10e-11,4;UBERON:0001242,3.10e-11,4;UBERON:0001262,3.10e-11,4;UBERON:0004786,3.10e-11,4;UBERON:0004808,3.10e-11,4;UBERON:0001277,3.10e-11,4;UBERON:0004907,2.97e-09,5 | |||
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| ||
|short_description=p22@ZMYND11 | |short_description=p22@ZMYND11 | ||
}} | }} |
Latest revision as of 11:39, 17 September 2015
Short description: | p22@ZMYND11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_22_at_ZMYND11_5end |
Coexpression cluster: | C84_choriocarcinoma_pancreatic_Wilms_Mallassezderived_thymus_salivary_colon |
Association with transcript: | -33bp_to_ENST00000439456, NM_006624_5end |
EntrezGene: | ZMYND11 |
HGNC: | 16966 |
UniProt: | E9PE09Q15326Q2LD48Q5BJG6Q5UGI2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.28e-23 | 7 |
germ cell | 1.28e-23 | 7 |
epithelial cell of large intestine | 4.66e-21 | 2 |
epithelial cell of pancreas | 2.80e-11 | 4 |
intestinal epithelial cell | 3.10e-11 | 4 |
Ontology term | p-value | n |
---|---|---|
rectum | 3.10e-11 | 4 |
intestinal mucosa | 3.10e-11 | 4 |
wall of intestine | 3.10e-11 | 4 |
gastrointestinal system mucosa | 3.10e-11 | 4 |
gastrointestinal system epithelium | 3.10e-11 | 4 |
intestinal epithelium | 3.10e-11 | 4 |
lower digestive tract | 2.97e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 9.91e-41 | 1 |
endocrine pancreas cancer | 9.91e-41 | 1 |
pancreatic endocrine carcinoma | 9.91e-41 | 1 |
teratoma | 6.96e-21 | 2 |
germ cell and embryonal cancer | 5.72e-17 | 22 |
germ cell cancer | 5.72e-17 | 22 |
pancreatic cancer | 2.80e-11 | 4 |
endocrine gland cancer | 5.92e-08 | 6 |
cell type cancer | 1.55e-07 | 143 |