FFCP PHASE1:Hg19::chr11:2160354..2160387,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=339bp_to_BC017277_5end | |association_with_transcript=339bp_to_BC017277_5end | ||
|cluster_id=chr11:2160354..2160387,+ | |||
|coexpression_cluster_id=C172 | |coexpression_cluster_id=C172 | ||
|description=CAGE_peak_1_at_BC017277_5end | |description=CAGE_peak_1_at_BC017277_5end | ||
|id=chr11:2160354..2160387,+ | |id=chr11:2160354..2160387,+ | ||
|ontology_enrichment_celltype=CL:0000349;8.02e-17;19!CL:0000244;1.46e-07;4!CL:0000731;1.46e-07;4!CL:0002541;2.04e-07;3!CL:0002577;2.26e-07;3 | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019=CL:0000349;8.02e-17;19!CL:0000244;1.46e-07;4!CL:0000731;1.46e-07;4!CL:0002541;2.04e-07;3!CL:0002577;2.26e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000349,8.22e-17,19;CL:0000244,8.03e-08,4;CL:0000731,8.03e-08,4;CL:0002541,2.07e-07,3;CL:0002577,2.29e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0003104;8.23e-08;31 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0000478;3.22e-17;24!UBERON:0005631;2.22e-13;10!UBERON:0000158;2.22e-13;10!UBERON:0000922;1.78e-12;49!UBERON:0001987;2.39e-09;4!UBERON:0000365;6.38e-09;5!UBERON:0000305;5.33e-08;7!UBERON:0003124;2.04e-07;3!UBERON:0000920;2.04e-07;3!UBERON:0005910;2.27e-07;6!UBERON:0005409;8.58e-07;22 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.30e-14!115;UBERON:0000481!7.20e-12!347;UBERON:0005631!2.34e-11!14;UBERON:0000158!2.34e-11!14;UBERON:0004119!5.14e-10!169;UBERON:0000925!5.14e-10!169;UBERON:0006595!5.14e-10!169;UBERON:0000478!1.46e-09!24;UBERON:0003124!8.20e-09!7;UBERON:0000468!7.86e-08!659;UBERON:0000119!1.18e-07!312;UBERON:0000483!1.32e-07!309;UBERON:0000922!2.77e-07!612;UBERON:0000064!5.07e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;3.22e-17;24!UBERON:0005631;2.22e-13;10!UBERON:0000158;2.22e-13;10!UBERON:0000922;1.78e-12;49!UBERON:0001987;2.39e-09;4!UBERON:0000365;6.38e-09;5!UBERON:0000305;5.33e-08;7!UBERON:0003124;2.04e-07;3!UBERON:0000920;2.04e-07;3!UBERON:0005910;2.27e-07;6!UBERON:0005409;8.58e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,8.57e-21,14;UBERON:0000158,8.57e-21,14;UBERON:0000478,3.28e-17,24;UBERON:0003124,4.43e-15,7;UBERON:0001987,2.43e-09,4;UBERON:0004340,2.43e-09,4;UBERON:0000365,3.24e-09,5;UBERON:0000305,5.36e-08,7;UBERON:0005910,1.31e-07,6;UBERON:0000920,2.07e-07,3;UBERON:0005409,5.40e-07,25;UBERON:0004871,6.42e-07,8;UBERON:0004119,6.99e-07,160;UBERON:0000925,6.99e-07,160;UBERON:0006595,6.99e-07,160 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0.872338524100369,0,0,0,0.982935746006035,0.697801167972428,21.4072544687569,30.8607364527291,0.123766352960047,0,0,0,0,0,0.246242116153576,0.408001382488506,0.313454721478088,0,0,0.125542639594803,0,0,0,0,0,1.08371286321253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.289693037921647,0,0,0.189069634328136,0,0,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33888245105868,0,0,0,0,0,0,0,0,0,0.949265659568129,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0.622422070799533,0,0,1.05950199351452,6.33793516927999,0.468642863667593,0,0,0,0,0,0,0,0.122834317311768,0,1.18800285728205,0.989067717114227,0,0,0.336672227908132,0.125118519871964,0,0.438977620880838,0,0.45071417671979,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04574548582567,0.725627385107593,0,0,0,0,0,1.85747171212792,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,1.47008711385542,0,0,0.590789906681404,0,12.5448207313976,0,0,0,0,0.648119116109707,0.325808305310325,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.87192013766656,0,0,0,0,0,0,0,1.41849132023278,0.266422179016099,0.714889968290738,27.6737018749636,2.46972101034231,0,0,0.791951872933429,0,0,0.099972991182057,0,0,0,0,0,0,0.579125226670317,0.821905290201534,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,3.55805325985506,0,0.271265023699736,1.03985430765404,0,0.157702415033935,0.117141414992713,0,0,0,0,0,0,8.2236486134351,15.4414540714885,0,0,0,11.5188477149579,19.9722527412596,67.4330354125187,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,15.7117284469109,0.200506470303285,0,0.114814448164607,0,0.524497659837696,0,0.0770153371044148,0,0,0,0,0,0.215915916102139,1.54227252690289,0.270946437543853,1.50506932156456,0,0,0.223874754722178,0,0.261435451024901,0,0.328014645699706,0,5.66725564062472,0,0,0,0,0,0.193341436584244,0,0,0.137836572484531,0,0.580066775656914,0.596586391912706,6.41030656656509,0,0.384380134730212,0,0.6069466851333,0,0,0,0,0,0,0,0,0,1.2655176988749,0,0.255897791311334,2.99557291623744,0,0,0.179872457583315,0,0.117812402345686,0,0,0,2.92580243453754,0,0,0.272999822815972,0,0,0.551365343546124,0,0,0,0,0,0,0,0.143411352204052,1.17898849215745,0,0,0,0,0,0,0,0,0,6.87249745670488,3.44404298136984,1.68471475667626,1.7737206141467,2.52695740227655,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.46174797895425,0,0,0,0,1.02555725490326,0,0,0.284136146806413,67.5646891807663,31.4782561682597,46.9955874211825,0,0,0,0,1.68900326502395,0.996239941255349,0.552567831062295,0.251932747854276,0,0,0,0,0,0,1.479651084554,0,0,0.969332746095218,0.463840490809256,0,0,0,2.17499872630438,0,0,0,0,0,0,0,0,0,0.221158519862449,0,0.438770794307945,0,0,1.76985594558733,0,5.99466151408956,0,0,61.8862249879924,5.03786763710243,70.8936252104784,0,0,0,0,0,0,0,0,0,0,1.69623685720729,0,0,0.619202951523374,4.888241159469,0,0,0,0.269604531922708,73.0345659041898,0.702793337176017,0,0,0,0,16.9387002468129,0.61214552326098,2.21153028699708,0,0,0,0,0,1.19472429772959,0,0,0,0,0,1.39781334593624,0,0,0,0,0.775912131907355,0,17.400517040101,0,0,0.253243183823515,0,0,0.213452994739353,3.19695375331408,0,0,21.7925647284695,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,1.11712960508902,1.14580212005842,0.717873024576814,2.1964690054889,0.858452096273142,0,10.8837225428497,0.720599767084807,0,44.5124980035814,38.2409582888612,45.4973921015748,9.74432066996013,0,0,0,0,0,0,0,0,0.121499113316049,0,0.394028536495991,9.23200751175967,0.105600336519406,0,0,5.00286728461357,2.64836788146173,0,0,0,0,0,0,0,0.226624183040251,0.293104467356165,166.958680029399,0,0,0,0,0.320362237703084,0.471612915298998,0,0.496166021811951,0,0,0,0,0.5013797880454,0,0,0,0,0,0,1.14681839138014,0.110929051536852,0.248385611765534,0,0.124980407962107,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,2.40016658797892,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567515953566836,0,0,0,0,0,0,0.327628914576042,0,0,0,0,0,0,0,0.352675943690684,0,0.128458450192919,0,0,0,1.26035848110859,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,1.19349733269765,1.72983755203292,0,1.56302802246618,0,0,0,0.202612753855184,0,0,0.443910671357348,1.09394961803644,0,0,0,0,0.535701835878287,0,0.606965604236632,0.455324382702595,43.1980542692051,0,0,0.0679697329768317,0.197318320688547,0,0,0.78493092850514,0,12.6122473491205,10.0447459256045,0,0,3.07349139959622,0.316027223465453,0,35.2932292774236,0.801711364730253,0,0,0,0,0,0,0,0,0,0,0,0,1.21917924982269,1.29485767437579,1.12929087541872,112.501999839805,2.91426595835484,0,9.54963720774568,0,0,0,0,0,12.8950140697335,0,0.490296643507811,0.942706188406504,0.392616934229891,0,3.3812458206672,0,0.0939839179798536,1.54698931136585,0,0.357107877211315,0,0,24.8314372003816,0,0.430018749454354,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| ||
|short_description=p1@BC017277 | |short_description=p1@BC017277 | ||
}} | }} |
Latest revision as of 21:04, 23 July 2015
Short description: | p1@BC017277 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_BC017277_5end |
Coexpression cluster: | C172_chorionic_skeletal_tongue_amniotic_liver_gastrointestinal_Pericytes |
Association with transcript: | 339bp_to_BC017277_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 8.22e-17 | 19 |
transitional epithelial cell | 8.03e-08 | 4 |
urothelial cell | 8.03e-08 | 4 |
chorionic membrane mesenchymal stem cell | 2.07e-07 | 3 |
placental epithelial cell | 2.29e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 8.57e-21 | 14 |
membranous layer | 8.57e-21 | 14 |
extraembryonic structure | 3.28e-17 | 24 |
chorion | 4.43e-15 | 7 |
placenta | 2.43e-09 | 4 |
allantois | 2.43e-09 | 4 |
urothelium | 3.24e-09 | 5 |
amnion | 5.36e-08 | 7 |
transitional epithelium | 1.31e-07 | 6 |
egg chorion | 2.07e-07 | 3 |
gastrointestinal system | 5.40e-07 | 25 |
somatic layer of lateral plate mesoderm | 6.42e-07 | 8 |
endoderm-derived structure | 6.99e-07 | 160 |
endoderm | 6.99e-07 | 160 |
presumptive endoderm | 6.99e-07 | 160 |