FFCP PHASE1:Hg19::chr1:151826179..151826192,-: Difference between revisions
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|id=chr1:151826179..151826192,-
|short_description=p1@THEM5
|description=CAGE_peak_1_at_THEM5_5end
|association_with_transcript=-6bp_to_ENST00000368817,NM_182578,uc...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=284486 | |EntrezGene=284486 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26755 | |HGNC=26755 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N1Q8 | |UniProt=Q8N1Q8 | ||
|association_with_transcript=-6bp_to_ENST00000368817,NM_182578,uc009wnd.2_5end | |||
|cluster_id=chr1:151826179..151826192,- | |||
|coexpression_cluster_id=C441 | |||
|description=CAGE_peak_1_at_THEM5_5end | |||
|id=chr1:151826179..151826192,- | |||
|ontology_enrichment_celltype=CL:0000622!2.68e-09!5;CL:0002150!1.61e-08!3;CL:0000861!1.61e-08!3;CL:0000154!9.88e-08!6;CL:0000764!4.50e-07!2;CL:0000765!4.50e-07!2;CL:0000050!4.50e-07!2;CL:0000038!4.50e-07!2;CL:0000558!4.50e-07!2;CL:0000547!4.50e-07!2;CL:0000549!4.50e-07!2;CL:0000550!4.50e-07!2;CL:0000552!4.50e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000764;3.29e-17;2!CL:0000558;3.29e-17;2!CL:0000317;6.98e-16;2!CL:1000448;6.98e-16;2!CL:0002308;6.98e-16;2!CL:0002140;6.98e-16;2!CL:0000622;2.31e-14;5!CL:0000154;4.61e-12;6!CL:0000150;3.29e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,3.30e-17,2;CL:0000765,3.30e-17,2;CL:0000050,3.30e-17,2;CL:0000038,3.30e-17,2;CL:0000558,3.30e-17,2;CL:0000547,3.30e-17,2;CL:0000549,3.30e-17,2;CL:0000550,3.30e-17,2;CL:0000552,3.30e-17,2;CL:0000317,5.99e-16,2;CL:1000448,5.99e-16,2;CL:0002308,5.99e-16,2;CL:0002140,5.99e-16,2;CL:0000622,2.10e-14,5;CL:0000154,4.27e-12,6;CL:0000150,3.13e-08,9 | |||
|ontology_enrichment_development_v019=UBERON:0000358;3.58e-09;1!UBERON:0003124;4.91e-09;1!UBERON:0009143;8.49e-09;1!UBERON:0004874;8.49e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3151;1.60e-09;1!DOID:3149;1.60e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,1.60e-09,1;DOID:3149,1.60e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.78e-15!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0002419;6.98e-16;2!UBERON:0007771;6.98e-16;2!UBERON:0003297;6.98e-16;2!UBERON:0001821;6.98e-16;2!UBERON:0003487;6.98e-16;2!UBERON:0001820;6.98e-16;2!UBERON:0000178;1.49e-12;15!UBERON:0000179;1.49e-12;15!UBERON:0000463;1.49e-12;15!UBERON:0001723;1.61e-11;3!UBERON:0001033;1.61e-11;3!UBERON:0007029;2.22e-09;1!UBERON:0000997;3.18e-09;1!UBERON:0005056;3.18e-09;1!UBERON:0004176;3.18e-09;1!UBERON:0000014;4.92e-09;4!UBERON:0005795;8.49e-09;1!UBERON:0000989;8.49e-09;1!UBERON:0002135;8.49e-09;1!UBERON:0008811;8.49e-09;1!UBERON:0002390;3.55e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002419,5.99e-16,2;UBERON:0007771,5.99e-16,2;UBERON:0003297,5.99e-16,2;UBERON:0001821,5.99e-16,2;UBERON:0003487,5.99e-16,2;UBERON:0001820,5.99e-16,2;UBERON:0005089,5.99e-16,2;UBERON:0005088,5.99e-16,2;UBERON:0000178,1.78e-12,15;UBERON:0000179,1.78e-12,15;UBERON:0000463,1.78e-12,15;UBERON:0001723,1.66e-11,3;UBERON:0001033,1.66e-11,3;UBERON:0010056,1.66e-11,3;UBERON:0007029,2.22e-09,1;UBERON:0000997,3.05e-09,1;UBERON:0005056,3.05e-09,1;UBERON:0000014,4.92e-09,4;UBERON:0007023,5.51e-09,114;UBERON:0000989,7.85e-09,1;UBERON:0008811,7.85e-09,1;UBERON:0006258,7.85e-09,1;UBERON:0005876,7.85e-09,1;UBERON:0004874,7.85e-09,1;UBERON:0002135,8.49e-09,1 | |||
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| ||
|short_description=p1@THEM5 | |||
}} | }} |
Latest revision as of 01:51, 17 September 2015
Short description: | p1@THEM5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_THEM5_5end |
Coexpression cluster: | C441_keratoacanthoma_skin_tongue_esophagus_cervical_salivary_Sebocyte |
Association with transcript: | -6bp_to_ENST00000368817, NM_182578, uc009wnd.2_5end |
EntrezGene: | THEM5 |
HGNC: | 26755 |
UniProt: | Q8N1Q8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 3.30e-17 | 2 |
erythroblast | 3.30e-17 | 2 |
megakaryocyte-erythroid progenitor cell | 3.30e-17 | 2 |
erythroid progenitor cell | 3.30e-17 | 2 |
reticulocyte | 3.30e-17 | 2 |
proerythroblast | 3.30e-17 | 2 |
basophilic erythroblast | 3.30e-17 | 2 |
polychromatophilic erythroblast | 3.30e-17 | 2 |
orthochromatic erythroblast | 3.30e-17 | 2 |
sebum secreting cell | 5.99e-16 | 2 |
epithelial cell of sweat gland | 5.99e-16 | 2 |
epithelial cell of skin gland | 5.99e-16 | 2 |
acinar cell of sebaceous gland | 5.99e-16 | 2 |
acinar cell | 2.10e-14 | 5 |
protein secreting cell | 4.27e-12 | 6 |
glandular epithelial cell | 3.13e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
skin gland | 5.99e-16 | 2 |
epidermis gland | 5.99e-16 | 2 |
gland of integumental system | 5.99e-16 | 2 |
sebaceous gland | 5.99e-16 | 2 |
skin sebaceous gland | 5.99e-16 | 2 |
sweat gland | 5.99e-16 | 2 |
sweat gland placode | 5.99e-16 | 2 |
sebaceous gland placode | 5.99e-16 | 2 |
blood | 1.78e-12 | 15 |
haemolymphatic fluid | 1.78e-12 | 15 |
organism substance | 1.78e-12 | 15 |
tongue | 1.66e-11 | 3 |
gustatory system | 1.66e-11 | 3 |
future tongue | 1.66e-11 | 3 |
surface | 2.22e-09 | 1 |
mammalian vulva | 3.05e-09 | 1 |
external female genitalia | 3.05e-09 | 1 |
zone of skin | 4.92e-09 | 4 |
adult organism | 5.51e-09 | 114 |
penis | 7.85e-09 | 1 |
intromittent organ | 7.85e-09 | 1 |
lateral plate mesenchyme | 7.85e-09 | 1 |
undifferentiated genital tubercle | 7.85e-09 | 1 |
somatopleure | 7.85e-09 | 1 |
mitral valve | 8.49e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 1.60e-09 | 1 |
keratoacanthoma | 1.60e-09 | 1 |