FFCP PHASE1:Hg19::chr6:35578342..35578345,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:35578342..35578345,- | |||
|description=CAGE_peak_at_chr6:35578342..35578345,- | |description=CAGE_peak_at_chr6:35578342..35578345,- | ||
|id=chr6:35578342..35578345,- | |id=chr6:35578342..35578345,- | ||
|ontology_enrichment_celltype=CL:0000746;3.27e-23;3!CL:0000737;8.69e-18;4 | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019=CL:0000746;3.27e-23;3!CL:0000737;8.69e-18;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0000746,4.09e-23,3;CL:0000513,4.09e-23,3;CL:0000737,1.03e-17,4 | |||
|ontology_enrichment_development_v019=CL:0000513;3.27e-23;3!UBERON:0006241;3.27e-23;3!UBERON:0003057;3.27e-23;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0001897;5.04e-34;2!UBERON:0010225;5.04e-34;2!UBERON:0002240;3.27e-23;3!UBERON:0005174;3.27e-23;3!UBERON:0001137;3.27e-23;3!UBERON:0002784;8.69e-18;4!UBERON:0001894;8.99e-11;7 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.46e-33!115;UBERON:0001049!9.18e-12!57;UBERON:0005068!9.18e-12!57;UBERON:0006241!9.18e-12!57;UBERON:0007135!9.18e-12!57;UBERON:0002780!6.68e-11!41;UBERON:0001890!6.68e-11!41;UBERON:0006240!6.68e-11!41;UBERON:0003080!1.49e-10!42;UBERON:0002616!7.96e-10!59;UBERON:0005743!1.31e-09!86;UBERON:0001017!2.50e-09!82;UBERON:0002791!4.96e-09!33;UBERON:0000073!5.05e-09!94;UBERON:0001016!5.05e-09!94;UBERON:0002020!6.05e-09!34;UBERON:0003528!6.05e-09!34;UBERON:0003075!7.19e-09!86;UBERON:0007284!7.19e-09!86;UBERON:0001893!1.10e-08!34;UBERON:0000955!1.68e-08!69;UBERON:0006238!1.68e-08!69;UBERON:0002346!3.15e-08!90;UBERON:0002308!3.45e-07!9;UBERON:0000125!3.45e-07!9;UBERON:0002420!3.93e-07!9;UBERON:0007245!3.93e-07!9;UBERON:0010009!3.93e-07!9;UBERON:0010011!3.93e-07!9;UBERON:0000454!3.93e-07!9;UBERON:0003056!4.34e-07!61;UBERON:0000153!5.91e-07!129;UBERON:0007811!5.91e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0001897;5.04e-34;2!UBERON:0010225;5.04e-34;2!UBERON:0002240;3.27e-23;3!UBERON:0005174;3.27e-23;3!UBERON:0001137;3.27e-23;3!UBERON:0002784;8.69e-18;4!UBERON:0001894;8.99e-11;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001897,5.04e-34,2;UBERON:0010225,5.04e-34,2;UBERON:0002240,2.62e-23,3;UBERON:0005174,2.62e-23,3;UBERON:0001137,2.62e-23,3;UBERON:0002784,8.69e-18,4;UBERON:0001894,8.99e-11,7;UBERON:0006222,8.99e-11,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0.236132343941038,0,0,0,0,0,0,0.0774672005803016,0,0,0,0.200544447470142,0,0.895661896959697,0,0.257575567634187,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786021525498329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,1.34140171940727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492434012174795,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0.214840489736547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0.562677665642051,0,0,0.211125408127993,0.19924798825107,0,0,0,0.123084805461069,0,0,0,0.511572370226872,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0.174919999992391,0,0,0,0,0,0,0,0,0.482385754501632,0,0,0,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0.332423363800313,0,0,0.167821586975843,0,0.158936578980379,0,0,0,0,0,0.265372693510018,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.947798694427319,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0.0730893170861856,0.0821154570532092,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.958337652243951,0,0,0,0,0,0,0.199679000498991,0,0.223171457441873,0.268733889946905,0,0,0.0787831823072236,0,0.0674035438541849,0,0,0,0.817220436669454,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0.92562821219883,0,0,0,0,0,0.992332043623902,0,0,0,0,0,0.919036730290385,0.327872630709804,0,0,0,0,0,0.665574309221114,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0,0,0.798169295285756,0,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0.126831620387814,0,0.548257766857182,0.496211178389294,0,0,0,0.336283722218824,0,0.227662191351298,0,0,0,0,0,0,0,0.078493092850514,0.314231179832004,0,0,0,0,0.214429632529969,0,0,0,0,0.207216164163037,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0.205325613712494,0,0,0,0,0,0,0,0,0.463044948647668,0,0,0,0,0,1.48523200163543,0,0,0.187967835959707,0,0,0,0,0,0.730336388246517,0,0.860037498908708,0,0,0,0,0,0,0,0.126166424835079,0,0,0,0,0,0,0,0,0,1.34462894620464,0,0,0.0645889098360061,0.620747142958579,0,0,0,0.217716747896961,0,0.134704106029175,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0.236132343941038,0,0,0,0,0,0,0.0774672005803016,0,0,0,0.200544447470142,0,0.895661896959697,0,0.257575567634187,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786021525498329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,1.34140171940727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492434012174795,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0.214840489736547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0.562677665642051,0,0,0.211125408127993,0.19924798825107,0,0,0,0.123084805461069,0,0,0,0.511572370226872,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0.174919999992391,0,0,0,0,0,0,0,0,0.482385754501632,0,0,0,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0.332423363800313,0,0,0.167821586975843,0,0.158936578980379,0,0,0,0,0,0.265372693510018,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.947798694427319,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0.0730893170861856,0.0821154570532092,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.958337652243951,0,0,0,0,0,0,0.199679000498991,0,0.223171457441873,0.268733889946905,0,0,0.0787831823072236,0,0.0674035438541849,0,0,0,0.817220436669454,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0.92562821219883,0,0,0,0,0,0.992332043623902,0,0,0,0,0,0.919036730290385,0.327872630709804,0,0,0,0,0,0.665574309221114,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0,0,0.798169295285756,0,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0.126831620387814,0,0.548257766857182,0.496211178389294,0,0,0,0.336283722218824,0,0.227662191351298,0,0,0,0,0,0,0,0.078493092850514,0.314231179832004,0,0,0,0,0.214429632529969,0,0,0,0,0.207216164163037,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0.205325613712494,0,0,0,0,0,0,0,0,0.463044948647668,0,0,0,0,0,1.48523200163543,0,0,0.187967835959707,0,0,0,0,0,0.730336388246517,0,0.860037498908708,0,0,0,0,0,0,0,0.126166424835079,0,0,0,0,0,0,0,0,0,1.34462894620464,0,0,0.0645889098360061,0.620747142958579,0,0,0,0.217716747896961,0,0.134704106029175,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr6:35578342..35578345,- | |short_description=p@chr6:35578342..35578345,- | ||
}} | }} |
Latest revision as of 01:02, 31 July 2015
Short description: | p@chr6:35578342..35578345, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:35578342..35578345, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac muscle cell | 4.09e-23 | 3 |
cardiac muscle myoblast | 4.09e-23 | 3 |
striated muscle cell | 1.03e-17 | 4 |
Ontology term | p-value | n |
---|---|---|
dorsal plus ventral thalamus | 5.04e-34 | 2 |
thalamic complex | 5.04e-34 | 2 |
spinal cord | 2.62e-23 | 3 |
dorsal region element | 2.62e-23 | 3 |
dorsum | 2.62e-23 | 3 |
regional part of diencephalon | 8.69e-18 | 4 |
diencephalon | 8.99e-11 | 7 |
future diencephalon | 8.99e-11 | 7 |