FFCP PHASE1:Hg19::chr2:65216141..65216162,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6509 | |EntrezGene=6509 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10942 | |HGNC=10942 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-293bp_to_uc010fcv.2,uc010yqa.1_5end | |association_with_transcript=-293bp_to_uc010fcv.2,uc010yqa.1_5end | ||
|cluster_id=chr2:65216141..65216162,+ | |||
|coexpression_cluster_id=C88 | |coexpression_cluster_id=C88 | ||
|description=CAGE_peak_9_at_SLC1A4_5end | |description=CAGE_peak_9_at_SLC1A4_5end | ||
|id=chr2:65216141..65216162,+ | |id=chr2:65216141..65216162,+ | ||
|ontology_enrichment_celltype=CL:0000148;4.77e-38;10!CL:0002567;4.82e-33;3!CL:0000235;5.62e-28;6!CL:0000147;4.14e-27;14!CL:0000710;6.92e-19;20!CL:0000075;6.74e-14;27!CL:0002566;4.53e-12;1!CL:0002077;1.99e-09;34 | |ontology_enrichment_celltype=CL:0000148!6.38e-07!10;CL:0000541!6.38e-07!10 | ||
| | |ontology_enrichment_celltype_v019=CL:0000148;4.77e-38;10!CL:0002567;4.82e-33;3!CL:0000235;5.62e-28;6!CL:0000147;4.14e-27;14!CL:0000710;6.92e-19;20!CL:0000075;6.74e-14;27!CL:0002566;4.53e-12;1!CL:0002077;1.99e-09;34 | ||
|ontology_enrichment_disease=DOID:1909;1.92e-21;2 | |ontology_enrichment_celltype_v019_2=CL:0000148,4.21e-38,10;CL:0000541,4.21e-38,10;CL:0002567,4.33e-33,3;CL:0000235,5.06e-28,6;CL:0000147,3.79e-27,14;CL:0000710,6.50e-19,20;CL:0000075,6.44e-14,27;CL:0002566,5.05e-12,1;CL:0002077,5.70e-11,34;CL:0000333,1.38e-08,41 | ||
|ontology_enrichment_uberon=UBERON:0007195;1.32e-11;1 | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:0050687!8.26e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:1909;1.92e-21;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,1.92e-21,2 | |||
|ontology_enrichment_uberon=UBERON:0001893!9.21e-11!34;UBERON:0002791!3.35e-10!33;UBERON:0002780!7.83e-10!41;UBERON:0001890!7.83e-10!41;UBERON:0006240!7.83e-10!41;UBERON:0001869!1.22e-09!32;UBERON:0003080!1.92e-09!42;UBERON:0002020!9.13e-09!34;UBERON:0003528!9.13e-09!34;UBERON:0001049!1.01e-08!57;UBERON:0005068!1.01e-08!57;UBERON:0006241!1.01e-08!57;UBERON:0007135!1.01e-08!57;UBERON:0000955!3.39e-08!69;UBERON:0006238!3.39e-08!69;UBERON:0002616!3.60e-08!59;UBERON:0002619!1.81e-07!22;UBERON:0000956!2.96e-07!25;UBERON:0000203!2.96e-07!25;UBERON:0001950!4.06e-07!20;UBERON:0001017!9.05e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0007195;1.32e-11;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007195,1.47e-11,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0.286235987131057,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0.290796477559129,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0.949387162322653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0.130059347559878,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0.087834785693126,2.35762335895883,0,0,0,0.174129737299267,0.398873881556595,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0.241011029883482,0,0.217879444092406,0.237270619111097,0.134831308160164,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,3.51006397708857,1.33768046059855,0,0,0,0,0,0,0,0,0.414656231081544,0.432359860250884,0,3.11139682031628,15.2795370223311,9.37739577680376,3.4214489204541,1.54241239054985,0.901029173531752,4.28739648945867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,2.10833939483032,0.239624855491583,2.29723871668228,0,0,0,0,0.448340575974109,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0.415941723061614,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422215270595328,0,0,0,0.0962221127255121,0,1.08890984861323,0,0,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423347165447766,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0.333698283423817,0.19538809540204,0,0,0,0,0,0,0,0,0.445773537109913,0,0,0,0,2.98244294329889,0.844016498463076,0,0.16480387422676,0.844501632511974,0,0,0,0.102268682502155,0,0,0.269605053441981,0.358042349351218,0.511572370226872,0,0,1.11136990144637,0.969332746095218,0.0927680981618513,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0.295547618953547,0.438770794307945,0,0.557694977114413,0.0769502585037971,0,0.23056390438806,0.179515288819544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0.296521128680622,0.370691816839509,0.313265848516366,0.134802265961354,0,0.234264445725339,0,0,0,0,0,0,0.063186579628488,0.450970258243478,0,0,0,0,0,0,0,0,0.0979923974143777,0.522355239482415,0.17472666824203,0,0,0.0730893170861856,0,0,0.0882561266915003,0,0,0,0.379864775735272,0,0.0801588202515337,0,0,0.288180834308212,0,0.171594997861965,0,0.248505071130865,0.235694034616795,0,0,0.101998217636322,0,0,0.273810757783986,0,0,0,0.558564802544508,0,0,0,0,0,0.134366944973453,0,0,0.236349546921671,0.247247575143499,0.337017719270924,0,0.0846733320657845,0,0.544813624446302,0,0,0,0.449947783103001,0.77380195455795,0.364497339948148,0,0,0,0,0.179287339332845,0.959575986597226,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0.342173675768659,0,0,0,0,0,0.395223263795889,0.121792598380896,0,0,0.2506898940227,0,0,0,0,0,0.1251909307065,0,0.110929051536852,0.124192805882767,0,0,1.06154382279153,1.99825733481477,0,0,0.144921028610825,0,0.233713309847224,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0.211312123358627,0,0.106691729694141,0.344429959321631,0,0,0,0,0.127894371303652,0,0.471797825567689,0.109209638192014,0,0,0.123935764259002,0,0,0,0,0,0,0.321146125482298,0,0.159633859057151,0.205116364240755,0.252071696221718,0,0.161475645631851,0,0.392590874004102,0,0,0.231051332300676,0,0,0.198916222116275,0,0,0,0,0,0,0.135075169236789,0.781078098613847,0,0.253663240775627,0,0,0,0.703484977438482,0,0,0,0,0,0,0.115233987555779,0,0.135939465953663,0.263091094251396,0.354581522651905,0.111231401892069,0,0.471346769748006,0,0,0,0,0.142953088353313,0,0.116241425368125,0,0,0,0.17071847709395,0,0,0,0,0,0.22910686854405,0,0,0,0.098150233615243,0.121917924982269,0,0,0,0,0,0,0,0.22589216407792,0,0,0,0,0,0,0.707029641304878,0,0,0,0,0.0939839179798536,0,0.0999411559249289,0.178553938605658,0,0,0,0,0.143339583151451,0,0.271965960763659,0,0,0,0,0,0.126166424835079,0,0,0.101988829741982,0,0,0,3.03114792872958,3.21556956187414,0,0.20686599172379,0,0,0.0645889098360061,0.186224142887574,0,0,0.202117188958219,0,0.342233301085281,0,0.0717222053926763,0,0.162806537221949,0.213454691755431,0,0.179650404213174,0,0.244482888365733,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0.286235987131057,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0.290796477559129,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0.949387162322653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0.130059347559878,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0.087834785693126,2.35762335895883,0,0,0,0.174129737299267,0.398873881556595,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0.241011029883482,0,0.217879444092406,0.237270619111097,0.134831308160164,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,3.51006397708857,1.33768046059855,0,0,0,0,0,0,0,0,0.414656231081544,0.432359860250884,0,3.11139682031628,15.2795370223311,9.37739577680376,3.4214489204541,1.54241239054985,0.901029173531752,4.28739648945867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,2.10833939483032,0.239624855491583,2.29723871668228,0,0,0,0,0.448340575974109,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0.415941723061614,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422215270595328,0,0,0,0.0962221127255121,0,1.08890984861323,0,0,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423347165447766,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0.333698283423817,0.19538809540204,0,0,0,0,0,0,0,0,0.445773537109913,0,0,0,0,2.98244294329889,0.844016498463076,0,0.16480387422676,0.844501632511974,0,0,0,0.102268682502155,0,0,0.269605053441981,0.358042349351218,0.511572370226872,0,0,1.11136990144637,0.969332746095218,0.0927680981618513,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0.295547618953547,0.438770794307945,0,0.557694977114413,0.0769502585037971,0,0.23056390438806,0.179515288819544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0.296521128680622,0.370691816839509,0.313265848516366,0.134802265961354,0,0.234264445725339,0,0,0,0,0,0,0.063186579628488,0.450970258243478,0,0,0,0,0,0,0,0,0.0979923974143777,0.522355239482415,0.17472666824203,0,0,0.0730893170861856,0,0,0.0882561266915003,0,0,0,0.379864775735272,0,0.0801588202515337,0,0,0.288180834308212,0,0.171594997861965,0,0.248505071130865,0.235694034616795,0,0,0.101998217636322,0,0,0.273810757783986,0,0,0,0.558564802544508,0,0,0,0,0,0.134366944973453,0,0,0.236349546921671,0.247247575143499,0.337017719270924,0,0.0846733320657845,0,0.544813624446302,0,0,0,0.449947783103001,0.77380195455795,0.364497339948148,0,0,0,0,0.179287339332845,0.959575986597226,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0.342173675768659,0,0,0,0,0,0.395223263795889,0.121792598380896,0,0,0.2506898940227,0,0,0,0,0,0.1251909307065,0,0.110929051536852,0.124192805882767,0,0,1.06154382279153,1.99825733481477,0,0,0.144921028610825,0,0.233713309847224,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0.211312123358627,0,0.106691729694141,0.344429959321631,0,0,0,0,0.127894371303652,0,0.471797825567689,0.109209638192014,0,0,0.123935764259002,0,0,0,0,0,0,0.321146125482298,0,0.159633859057151,0.205116364240755,0.252071696221718,0,0.161475645631851,0,0.392590874004102,0,0,0.231051332300676,0,0,0.198916222116275,0,0,0,0,0,0,0.135075169236789,0.781078098613847,0,0.253663240775627,0,0,0,0.703484977438482,0,0,0,0,0,0,0.115233987555779,0,0.135939465953663,0.263091094251396,0.354581522651905,0.111231401892069,0,0.471346769748006,0,0,0,0,0.142953088353313,0,0.116241425368125,0,0,0,0.17071847709395,0,0,0,0,0,0.22910686854405,0,0,0,0.098150233615243,0.121917924982269,0,0,0,0,0,0,0,0.22589216407792,0,0,0,0,0,0,0.707029641304878,0,0,0,0,0.0939839179798536,0,0.0999411559249289,0.178553938605658,0,0,0,0,0.143339583151451,0,0.271965960763659,0,0,0,0,0,0.126166424835079,0,0,0.101988829741982,0,0,0,3.03114792872958,3.21556956187414,0,0.20686599172379,0,0,0.0645889098360061,0.186224142887574,0,0,0.202117188958219,0,0.342233301085281,0,0.0717222053926763,0,0.162806537221949,0.213454691755431,0,0.179650404213174,0,0.244482888365733,0,0,0,0 | ||
|short_description=p9@SLC1A4 | |short_description=p9@SLC1A4 | ||
}} | }} |
Latest revision as of 00:21, 18 September 2015
Short description: | p9@SLC1A4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_SLC1A4_5end |
Coexpression cluster: | C88_Melanocyte_melanoma_Macrophage_Mesenchymal_migratory_Dendritic_Monocytederived |
Association with transcript: | -293bp_to_uc010fcv.2, uc010yqa.1_5end |
EntrezGene: | SLC1A4 |
HGNC: | 10942 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 4.21e-38 | 10 |
melanoblast | 4.21e-38 | 10 |
light melanocyte | 4.33e-33 | 3 |
macrophage | 5.06e-28 | 6 |
pigment cell | 3.79e-27 | 14 |
neurecto-epithelial cell | 6.50e-19 | 20 |
columnar/cuboidal epithelial cell | 6.44e-14 | 27 |
dark melanocyte | 5.05e-12 | 1 |
ecto-epithelial cell | 5.70e-11 | 34 |
migratory neural crest cell | 1.38e-08 | 41 |
Ontology term | p-value | n |
---|---|---|
stroma of bone marrow | 1.47e-11 | 1 |
Ontology term | p-value | n |
---|---|---|
melanoma | 1.92e-21 | 2 |