FFCP PHASE1:Hg19::chr15:68724544..68724555,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22801 | |EntrezGene=22801 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6136 | |HGNC=6136 | ||
|TSSclassifier=strong | |||
|UniProt=F5H1A1 | |UniProt=F5H1A1 | ||
|association_with_transcript=-42bp_to_ENST00000537153_5end | |association_with_transcript=-42bp_to_ENST00000537153_5end | ||
|cluster_id=chr15:68724544..68724555,- | |||
|coexpression_cluster_id=C836 | |coexpression_cluster_id=C836 | ||
|description=CAGE_peak_3_at_ITGA11_5end | |description=CAGE_peak_3_at_ITGA11_5end | ||
|id=chr15:68724544..68724555,- | |id=chr15:68724544..68724555,- | ||
|ontology_enrichment_celltype=CL:0002620;1.84e-10;23!CL:0000057;1.23e-09;73!CL:0002320;2.91e-08;188!CL:0002334;2.93e-08;12!CL:0000327;6.00e-07;15!CL:0000153;7.33e-07;9!CL:0000447;7.33e-07;9 | |ontology_enrichment_celltype=CL:0000055!1.17e-34!180;CL:0000057!5.49e-23!75;CL:0000183!5.51e-10!59;CL:0002620!1.50e-09!23;CL:0000680!8.31e-09!57;CL:0000056!8.31e-09!57;CL:0000355!8.31e-09!57;CL:0000187!1.23e-08!54;CL:0002334!1.67e-08!12;CL:0000192!1.90e-08!42;CL:0000514!1.90e-08!42;CL:0000048!1.03e-07!430;CL:0000136!2.80e-07!15;CL:0000723!5.01e-07!436;CL:0000393!5.07e-07!60;CL:0000211!5.07e-07!60;CL:0000062!7.13e-07!11;CL:0000375!7.13e-07!11;CL:0000335!7.13e-07!11 | ||
| | |ontology_enrichment_celltype_v019=CL:0002620;1.84e-10;23!CL:0000057;1.23e-09;73!CL:0002320;2.91e-08;188!CL:0002334;2.93e-08;12!CL:0000327;6.00e-07;15!CL:0000153;7.33e-07;9!CL:0000447;7.33e-07;9 | ||
|ontology_enrichment_disease=DOID:17;1.79e-07;5!DOID:450;1.79e-07;5!DOID:66;1.79e-07;5!DOID:423;1.79e-07;5!DOID:0080000;1.79e-07;5!DOID:11722;1.79e-07;5 | |ontology_enrichment_celltype_v019_2=CL:0000057,1.22e-24,76;CL:0000048,3.15e-12,427;CL:0000723,1.28e-11,433;CL:0000034,7.66e-11,441;CL:0002620,2.09e-10,23;CL:0002320,1.87e-09,361;CL:0000134,3.61e-09,354;CL:0000219,5.80e-09,386;CL:0002334,4.01e-08,12;CL:0000136,9.51e-08,15;CL:0000327,4.56e-07,15;CL:0000153,7.13e-07,9;CL:0000447,7.13e-07,9 | ||
|ontology_enrichment_uberon=UBERON:0004457;5.57e-10;9!UBERON:0000042;5.57e-10;9!UBERON:0003688;2.27e-09;6!UBERON:0002358;2.27e-09;6!UBERON:0003684;2.27e-09;6!UBERON:0001178;2.27e-09;6!UBERON:0002384;6.70e-08;198 | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;1.79e-07;5!DOID:450;1.79e-07;5!DOID:66;1.79e-07;5!DOID:423;1.79e-07;5!DOID:0080000;1.79e-07;5!DOID:11722;1.79e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.80e-07,5;DOID:450,1.80e-07,5;DOID:66,1.80e-07,5;DOID:423,1.80e-07,5;DOID:0080000,1.80e-07,5;DOID:11722,1.80e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0000914!2.10e-08!83;UBERON:0002329!2.10e-08!83;UBERON:0003077!2.10e-08!83;UBERON:0003059!2.10e-08!83;UBERON:0007282!2.10e-08!83;UBERON:0009618!2.10e-08!83;UBERON:0007285!2.10e-08!83;UBERON:0002385!2.77e-08!63;UBERON:0001015!2.77e-08!63;UBERON:0000383!2.77e-08!63;UBERON:0004290!3.76e-08!70;UBERON:0001134!7.30e-08!61;UBERON:0002036!7.30e-08!61;UBERON:0003082!7.30e-08!61;UBERON:0000475!8.24e-08!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;5.57e-10;9!UBERON:0000042;5.57e-10;9!UBERON:0003688;2.27e-09;6!UBERON:0002358;2.27e-09;6!UBERON:0003684;2.27e-09;6!UBERON:0001178;2.27e-09;6!UBERON:0002384;6.70e-08;198 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,7.51e-11,371;UBERON:0003688,2.24e-09,6;UBERON:0002358,2.24e-09,6;UBERON:0003684,2.24e-09,6;UBERON:0001178,2.24e-09,6;UBERON:0002199,3.72e-07,46;UBERON:0002416,3.72e-07,46;UBERON:0004457,6.08e-07,12;UBERON:0000042,6.08e-07,12;UBERON:0002097,7.63e-07,41 | |||
|phase1_expression=8.72056220498672,10.2768251467672,11.8401699440616,17.0124607200322,11.6209884551095,7.85104671690332,12.6649939084155,0,0,0,0,0,0,0,0,1.34465029290355,1.80808358407193,1.46062018077475,0.975865597581014,2.95490539384291,3.06001036866379,13.7920077450359,0.286235987131057,0.136874425072884,0.87879847716362,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,3.61439152384566,12.0321098552613,8.40109809972778,8.74814541756209,11.6792368872633,0,0,0.175669571386252,1.30979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0.35576626268671,0,0.402829317109147,2.28081631715554,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,20.3758500195081,1.8994576749687,2.91300197789081,16.0628507619336,0.709336764396714,4.48542080113846,4.2699598291882,13.813382711361,1.24484414159907,1.0776853765575,0.326923806226917,4.54072282934794,5.18558332031999,0.468642863667593,0,0,0.149448680551801,0.352303495931295,0.323745888736263,0.140450806702248,0,0.368502951935304,0,4.75201142912821,4.20353779773547,0,0,0.336672227908132,0.250237039743928,0,5.70670907145089,6.74273150757843,10.065949946742,0.340296549480063,7.5343646989322,18.1523780495782,9.11307174986116,13.2040082277137,7.9350447513598,14.6855107826009,16.3782833571799,17.3839622208504,13.0565586916006,8.33031455005578,13.2551854044911,3.71785930683267,20.235546773447,7.45565526884538,1.18692414617341,0,0,0,0,0,0,0,0,0,1.56449532329816,7.07565032012174,0,0.464367928031979,0,0,0,0,0,0,0.474541238222193,0,0,0,0,1.40241773803446,2.8810180793198,0,0,0,0,0,0,0.171567810298526,0,0,0,0,2.28065813717227,1.03993478527958,0,0.463721619900307,2.58299127318808,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90622843387113,0,0.8800594298514,7.10994436667778,0,0,5.05282421511254,7.28052058379563,0.257207374262142,4.25547396069835,0.532844358032199,0.57191197463259,0,0,0,0.355391948742546,0,1.80863626235752,2.61460037580088,0.299918973546171,0,0,0,12.4604924855623,16.0806710167759,0,1.01346914667305,0,0.716243852959582,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0.542530047399471,6.03115498439341,5.70972764150918,10.7237642223076,9.60559602940248,18.3577120833909,20.4666753650386,3.10419213877515,7.97070718242524,5.8998133933345,0.260650843404249,9.98585903059977,5.83343820478455,0,0,0,0,0,0.30239029332968,23.0740261271462,25.3212255925303,26.9433690655751,14.3515847166385,30.7024349440022,21.5544254332434,4.45254199334973,0.925258162815933,2.13074070375753,0.410635780069046,1.03850885836724,0.464841513839837,0,0,0,2.29628896329214,0.182091168006717,0.786746489756545,0,0.0770153371044148,0,0,0.73886140225013,0,0,0.863663664408557,0,2.16757150035082,1.50506932156456,0,0,0,0,0,0,0,0,0,0.824125183365091,0.577566499444116,0,0,0,3.48014585851639,0,0,0.964856007391714,0.751941714077915,0.290033387828457,0.511359764496605,5.16385806751077,0,0,0,0,3.253918845081,11.333244485903,0,0.616067160352178,1.06461206063404,0,0.37064843820784,0.715624433709956,2.97726695487734,2.53103539774981,1.5250415513906,0.255897791311334,1.71175595213568,0.95460974377781,0,2.15846949099978,1.09814811894422,0.942499218765491,0.202182481573316,0,1.68503382495592,1.46290121726877,0.243713489631284,0,0.409499734223957,5.09059555033366,1.13008116620243,1.65409603063837,0.66343897524122,0.876901770507525,1.73632660280006,0,1.82619339266434,0,0,0.430234056612155,0.392996164052485,2.1400263088875,0.354761064070598,9.49984358839489,6.58589785919804,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0,1.55832187032068,0,0,12.5526232598174,0.828851746593443,0,1.84083628503879,0,4.66559381492711,0,0,0,0.591860433821602,0,7.77958931012458,0,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0,0,0.347249989866585,0.885741385813839,0,0,0,0,0.219385397153973,0,0,3.53971189117467,5.46921868065606,0,0,0,0,2.28993983504656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0.134802265961354,0,0.468528891450678,0,0,0,0.394584402849391,0,0.30607276163049,1.64285107034069,0,0,0,0.992975867626496,0.627865836814451,0,0,0,0,0,0,1.7472666824203,0,0,0,0,0.193978032976839,0,0.225980740780532,1.09633539717401,0.596143835108969,0.189932387867636,0,0.160317640503067,0.213452994739353,1.19885765749278,0,0,0,0,0.621262677827163,0.471388069233591,0.951329442515298,0.209205692624666,1.22397861163586,1.44475294950759,0,0,0,5.58695073845944,0,3.0721064139948,1.3749625440701,0,0,0,0,0.403100834920358,11.8898961568993,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182248669974074,0,0.315222829196793,0.209818352539992,0,0,0,2.1440859791201,0,0,2.71499800876856,0.864221491201268,0.979762080328227,0,0,3.23737241392301,2.94611437952327,0,0,0.258565912723101,0.13223260174269,0,0,0,0,0,0,0,0,0,2.1760712134779,0.2506898940227,0.919036730290385,0.327872630709804,0,0,0.12202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| ||
|short_description=p3@ITGA11 | |short_description=p3@ITGA11 | ||
}} | }} |
Latest revision as of 18:44, 18 September 2015
Short description: | p3@ITGA11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ITGA11_5end |
Coexpression cluster: | C836_Preadipocyte_osteoclastoma_Ewing_Fibroblast_Adipocyte_Osteoblast_hepatic |
Association with transcript: | -42bp_to_ENST00000537153_5end |
EntrezGene: | ITGA11 |
HGNC: | 6136 |
UniProt: | F5H1A1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.22e-24 | 76 |
multi fate stem cell | 3.15e-12 | 427 |
somatic stem cell | 1.28e-11 | 433 |
stem cell | 7.66e-11 | 441 |
skin fibroblast | 2.09e-10 | 23 |
connective tissue cell | 1.87e-09 | 361 |
mesenchymal cell | 3.61e-09 | 354 |
motile cell | 5.80e-09 | 386 |
preadipocyte | 4.01e-08 | 12 |
fat cell | 9.51e-08 | 15 |
extracellular matrix secreting cell | 4.56e-07 | 15 |
GAG secreting cell | 7.13e-07 | 9 |
carbohydrate secreting cell | 7.13e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 7.51e-11 | 371 |
omentum | 2.24e-09 | 6 |
peritoneum | 2.24e-09 | 6 |
abdominal cavity | 2.24e-09 | 6 |
visceral peritoneum | 2.24e-09 | 6 |
integument | 3.72e-07 | 46 |
integumental system | 3.72e-07 | 46 |
cavity lining | 6.08e-07 | 12 |
serous membrane | 6.08e-07 | 12 |
skin of body | 7.63e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.80e-07 | 5 |
myotonic disease | 1.80e-07 | 5 |
muscle tissue disease | 1.80e-07 | 5 |
myopathy | 1.80e-07 | 5 |
muscular disease | 1.80e-07 | 5 |
myotonic dystrophy | 1.80e-07 | 5 |