FFCP PHASE1:Hg19::chr1:159931002..159931081,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:159931002..159931081,+
|short_description=p1@LOC100505633
|description=CAGE_peak_1_at_LOC100505633_5end
|association_with_transcript=0bp_to_ENST00000423943...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=100505633 | |EntrezGene=100505633 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000423943,ENST00000443364,NR_038849,uc001fuu.2_5end | |||
|cluster_id=chr1:159931002..159931081,+ | |||
|description=CAGE_peak_1_at_LOC100505633_5end | |||
|id=chr1:159931002..159931081,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.28e-13!180;CL:0000057!3.10e-12!75;CL:0000680!2.44e-07!57;CL:0000056!2.44e-07!57;CL:0000355!2.44e-07!57 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.48e-11,76;CL:0000680,1.06e-07,58;CL:0000056,1.06e-07,58;CL:0000355,1.06e-07,58;CL:0000187,5.11e-07,55 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!3.55e-11!95;UBERON:0004119!7.11e-10!169;UBERON:0000925!7.11e-10!169;UBERON:0006595!7.11e-10!169;UBERON:0003104!4.93e-09!238;UBERON:0009142!4.93e-09!238;UBERON:0001007!9.51e-09!155;UBERON:0001555!9.51e-09!155;UBERON:0007026!9.51e-09!155;UBERON:0002385!1.72e-08!63;UBERON:0001015!1.72e-08!63;UBERON:0000383!1.72e-08!63;UBERON:0001134!7.69e-08!61;UBERON:0002036!7.69e-08!61;UBERON:0003082!7.69e-08!61;UBERON:0002100!1.46e-07!216;UBERON:0000914!4.42e-07!83;UBERON:0002329!4.42e-07!83;UBERON:0003077!4.42e-07!83;UBERON:0003059!4.42e-07!83;UBERON:0007282!4.42e-07!83;UBERON:0009618!4.42e-07!83;UBERON:0007285!4.42e-07!83;UBERON:0004921!5.53e-07!129;UBERON:0004185!5.53e-07!129 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,1.39e-09,99;UBERON:0002385,1.27e-08,64;UBERON:0001015,1.27e-08,64;UBERON:0000383,1.27e-08,64;UBERON:0004119,4.15e-08,160;UBERON:0000925,4.15e-08,160;UBERON:0006595,4.15e-08,160;UBERON:0001134,6.39e-08,62;UBERON:0002036,6.39e-08,62;UBERON:0003082,6.39e-08,62;UBERON:0001007,1.63e-07,145;UBERON:0001555,1.63e-07,145;UBERON:0007026,1.63e-07,145 | |||
|phase1_expression=57.5920462287664,16.4857403396057,47.3606797762463,15.0109947529696,12.5149106439641,35.7658794881151,2.53299878168311,6.31719873426831,1.30592814099919,0.737201809504527,0,0,0,0.495065411840187,0.662794751455832,2.01697543935533,1.80808358407193,1.46062018077475,3.41552959153355,0,0,0.940364164434263,0,0,0,0,0,0,0,0,0.309632246632152,11.0330546937471,5.4217065380085,20.3364705591733,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81619850790011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.00429761072646,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,37.0801429346238,55.3001903148386,25.0668955317945,47.3648117001894,8.74814541756209,6.8128881842369,0,0,0.087834785693126,0.523916301990851,8.37879163072847,14.8313777113772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.4662572514208,87.467063498376,84.7158123036039,19.4641495795432,22.3732564184075,28.7281389580669,36.44404400925,9.60740961567345,11.8400423240237,12.1372303805909,4.31074150623002,1.63461903113459,0.151357427644931,0,0.468642863667593,0,0.570471821544449,2.69007624993242,0.352303495931295,0.323745888736263,0.140450806702248,1.02077085627447,0.122834317311768,1.34323515528495,0,1.97813543422845,12.7422590671324,2.15585442544872,0,0.250237039743928,1.10825646193673,3.95079858792754,4.59731693698529,6.76071265079686,12.9312688802424,6.63741652048789,17.0845911054854,35.3926274936468,6.60200411385685,37.098910525838,13.1396675423271,33.6871509960178,17.3839622208504,34.0055148012583,6.81571190459109,24.301173241567,48.4938170456436,2.84007674013291,11.6872433944063,6.10418132317755,2.51239109112286,4.36393792945335,2.86804595389004,0,0,0,0,0,0,0,0,0,0,0.721879481669586,1.65629520055781,1.18009283054671,1.20505514941741,1.54411561825352,2.39667388501647,0.71181185733329,2.15730093056263,0.588664395376038,0,0,0,5.7620361586396,1.47008711385542,0,0,0.590789906681404,0,5.78045661152634,0,14.0480365323041,13.4882103909143,53.2803553781644,6.66636805141413,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81201501960331,2.68771405118175,2.55195175036296,14.0606880643472,8.4283842169049,0.383382679165211,0,0,0,0,0,0.063497894292169,0,0,5.13217338068116,0,0,0,0,0,0,5.8172272091,3.57656445851882,0,0.26593811658487,0,0,0,0.266422179016099,7.00592168924923,0,0.823240336780769,1.95441710576241,9.59558261604874,0,37.6799221324483,31.3752045096106,44.9878460319257,0,0,0,42.8928491329933,26.4182452418462,4.27910715122155,30.2592930935241,3.49309748335652,2.86497541183833,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0.813795071099207,22.2528821837964,54.7776995607287,59.9269177128952,32.0967477080034,29.7936638730442,9.09630016223939,16.5556914068008,8.63493278096067,11.4308884495856,6.86380554297854,0,0,0,0,0,1.21251028578504,1.66435439510497,0.907170879989041,80.8831453489213,23.4796819130736,37.3277925595988,51.1275205530247,40.9365799253363,57.9074116116987,43.0412392690474,0.462629081407967,7.45759246315134,7.06293541718759,3.11552657510173,4.53220475993841,0.483437798366489,0.200506470303285,166.298266018229,37.4295101016618,6.19109971222838,5.76947425821466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,58.9809068177564,41.8296721639841,0,0,0.325378394664303,1.23649213977267,0,0,13.7823729119081,28.6026508256069,101.230875801821,6.76695028044854,1.23238893691716,1.99554777143968,1.10269257987624,1.39646318328756,2.32026710262766,0.596586391912706,12.4644849905432,66.4445359751132,56.8882599400714,13.5269475244259,85.8829559463619,28.3555785071344,8.81474571125792,9.0614845120878,6.77673876387395,14.9045688488766,12.179061889051,3.15051172476664,14.5987384476831,0,0.949138274156178,6.29079639948622,2.04718233049067,6.84702380854273,10.18250393363,3.92474320099615,1.61885211824983,7.13796277313742,3.18093486333353,22.0378904914914,4.75530963519025,3.37006764991185,0,24.858775942391,20.0735278837835,6.27899592476734,20.2209767693809,11.3008116620243,3.30819206127675,21.230047207719,24.5532495742107,1.73632660280006,0,0,2.78841148289775,1.69017361519345,1.00387946542836,7.85992328104969,0,0.709522128141196,47.7103255772721,64.2125041271809,0,0,51.5750524208745,5.3624182042863,5.44454924306613,0.753150406214233,0.43050537267123,0,0.886860307073351,0,0,0,0,0,0,0,0,0,0,0,42.3919573647185,0.185803175125719,0,0,0,0,0,0,0,0,0,0,2.50634477090067,0,0,0,0,0,0,0,0,0,0,13.5396138842484,3.51592382018778,0,14.098700508785,19.6497567428631,2.05111450980652,0,0,0,12.4147132063599,9.50286978664444,32.2518737204194,0,0,0,0,0.63337622438398,6.97367958878744,6.3545300572164,0,0,0,44.1676214479767,11.7727540002998,13.6056092753463,0,7.29961201713309,0,122.250689159101,0,0.185536196323703,0,0,2.18649999990489,1.44999915086959,10.1276168974095,0,3.07303986298317,0,0,0,0,0,0,0.110579259931225,0,1.31631238292384,94.3407094074455,89.6494675711419,5.309567836762,1.93701494939902,0,0,0,3.82801391678303,0.457987967009312,0.533034776018635,0,0,25.5965990126241,0,0,0,0,17.3240871088613,0,0,0.282706142867882,0,6.96683351754953,2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|phase1_expression=57.5920462287664,16.4857403396057,47.3606797762463,15.0109947529696,12.5149106439641,35.7658794881151,2.53299878168311,6.31719873426831,1.30592814099919,0.737201809504527,0,0,0,0.495065411840187,0.662794751455832,2.01697543935533,1.80808358407193,1.46062018077475,3.41552959153355,0,0,0.940364164434263,0,0,0,0,0,0,0,0,0.309632246632152,11.0330546937471,5.4217065380085,20.3364705591733,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81619850790011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.00429761072646,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,37.0801429346238,55.3001903148386,25.0668955317945,47.3648117001894,8.74814541756209,6.8128881842369,0,0,0.087834785693126,0.523916301990851,8.37879163072847,14.8313777113772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.4662572514208,87.467063498376,84.7158123036039,19.4641495795432,22.3732564184075,28.7281389580669,36.44404400925,9.60740961567345,11.8400423240237,12.1372303805909,4.31074150623002,1.63461903113459,0.151357427644931,0,0.468642863667593,0,0.570471821544449,2.69007624993242,0.352303495931295,0.323745888736263,0.140450806702248,1.02077085627447,0.122834317311768,1.34323515528495,0,1.97813543422845,12.7422590671324,2.15585442544872,0,0.250237039743928,1.10825646193673,3.95079858792754,4.59731693698529,6.76071265079686,12.9312688802424,6.63741652048789,17.0845911054854,35.3926274936468,6.60200411385685,37.098910525838,13.1396675423271,33.6871509960178,17.3839622208504,34.0055148012583,6.81571190459109,24.301173241567,48.4938170456436,2.84007674013291,11.6872433944063,6.10418132317755,2.51239109112286,4.36393792945335,2.86804595389004,0,0,0,0,0,0,0,0,0,0,0.721879481669586,1.65629520055781,1.18009283054671,1.20505514941741,1.54411561825352,2.39667388501647,0.71181185733329,2.15730093056263,0.588664395376038,0,0,0,5.7620361586396,1.47008711385542,0,0,0.590789906681404,0,5.78045661152634,0,14.0480365323041,13.4882103909143,53.2803553781644,6.66636805141413,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81201501960331,2.68771405118175,2.55195175036296,14.0606880643472,8.4283842169049,0.383382679165211,0,0,0,0,0,0.063497894292169,0,0,5.13217338068116,0,0,0,0,0,0,5.8172272091,3.57656445851882,0,0.26593811658487,0,0,0,0.266422179016099,7.00592168924923,0,0.823240336780769,1.95441710576241,9.59558261604874,0,37.6799221324483,31.3752045096106,44.9878460319257,0,0,0,42.8928491329933,26.4182452418462,4.27910715122155,30.2592930935241,3.49309748335652,2.86497541183833,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0.813795071099207,22.2528821837964,54.7776995607287,59.9269177128952,32.0967477080034,29.7936638730442,9.09630016223939,16.5556914068008,8.63493278096067,11.4308884495856,6.86380554297854,0,0,0,0,0,1.21251028578504,1.66435439510497,0.907170879989041,80.8831453489213,23.4796819130736,37.3277925595988,51.1275205530247,40.9365799253363,57.9074116116987,43.0412392690474,0.462629081407967,7.45759246315134,7.06293541718759,3.11552657510173,4.53220475993841,0.483437798366489,0.200506470303285,166.298266018229,37.4295101016618,6.19109971222838,5.76947425821466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,58.9809068177564,41.8296721639841,0,0,0.325378394664303,1.23649213977267,0,0,13.7823729119081,28.6026508256069,101.230875801821,6.76695028044854,1.23238893691716,1.99554777143968,1.10269257987624,1.39646318328756,2.32026710262766,0.596586391912706,12.4644849905432,66.4445359751132,56.8882599400714,13.5269475244259,85.8829559463619,28.3555785071344,8.81474571125792,9.0614845120878,6.77673876387395,14.9045688488766,12.179061889051,3.15051172476664,14.5987384476831,0,0.949138274156178,6.29079639948622,2.04718233049067,6.84702380854273,10.18250393363,3.92474320099615,1.61885211824983,7.13796277313742,3.18093486333353,22.0378904914914,4.75530963519025,3.37006764991185,0,24.858775942391,20.0735278837835,6.27899592476734,20.2209767693809,11.3008116620243,3.30819206127675,21.230047207719,24.5532495742107,1.73632660280006,0,0,2.78841148289775,1.69017361519345,1.00387946542836,7.85992328104969,0,0.709522128141196,47.7103255772721,64.2125041271809,0,0,51.5750524208745,5.3624182042863,5.44454924306613,0.753150406214233,0.43050537267123,0,0.886860307073351,0,0,0,0,0,0,0,0,0,0,0,42.3919573647185,0.185803175125719,0,0,0,0,0,0,0,0,0,0,2.50634477090067,0,0,0,0,0,0,0,0,0,0,13.5396138842484,3.51592382018778,0,14.098700508785,19.6497567428631,2.05111450980652,0,0,0,12.4147132063599,9.50286978664444,32.2518737204194,0,0,0,0,0.63337622438398,6.97367958878744,6.3545300572164,0,0,0,44.1676214479767,11.7727540002998,13.6056092753463,0,7.29961201713309,0,122.250689159101,0,0.185536196323703,0,0,2.18649999990489,1.44999915086959,10.1276168974095,0,3.07303986298317,0,0,0,0,0,0,0.110579259931225,0,1.31631238292384,94.3407094074455,89.6494675711419,5.309567836762,1.93701494939902,0,0,0,3.82801391678303,0.457987967009312,0.533034776018635,0,0,25.5965990126241,0,0,0,0,17.3240871088613,0,0,0.282706142867882,0,6.96683351754953,2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| ||
|short_description=p1@LOC100505633 | |||
}} | }} |
Latest revision as of 00:23, 18 September 2015
Short description: | p1@LOC100505633 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LOC100505633_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000423943, ENST00000443364, NR_038849, uc001fuu.2_5end |
EntrezGene: | LOC100505633 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.48e-11 | 76 |
muscle precursor cell | 1.06e-07 | 58 |
myoblast | 1.06e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.06e-07 | 58 |
muscle cell | 5.11e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
surface structure | 1.39e-09 | 99 |
muscle tissue | 1.27e-08 | 64 |
musculature | 1.27e-08 | 64 |
musculature of body | 1.27e-08 | 64 |
endoderm-derived structure | 4.15e-08 | 160 |
endoderm | 4.15e-08 | 160 |
presumptive endoderm | 4.15e-08 | 160 |
skeletal muscle tissue | 6.39e-08 | 62 |
striated muscle tissue | 6.39e-08 | 62 |
myotome | 6.39e-08 | 62 |
digestive system | 1.63e-07 | 145 |
digestive tract | 1.63e-07 | 145 |
primitive gut | 1.63e-07 | 145 |