FFCP PHASE1:Hg19::chr5:134906674..134906690,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:134906674..134906690,+ | |||
|coexpression_cluster_id=C607 | |coexpression_cluster_id=C607 | ||
|description=CAGE_peak_at_chr5:134906674..134906690,+ | |description=CAGE_peak_at_chr5:134906674..134906690,+ | ||
|id=chr5:134906674..134906690,+ | |id=chr5:134906674..134906690,+ | ||
|ontology_enrichment_celltype=CL:0002605!3.53e-19!3;CL:0000128!1.65e-08!7;CL:0000126!1.65e-08!7;CL:0000127!1.65e-08!7;CL:0002453!1.65e-08!7 | |ontology_enrichment_celltype=CL:0002605!3.53e-19!3;CL:0000128!1.65e-08!7;CL:0000126!1.65e-08!7;CL:0000127!1.65e-08!7;CL:0002453!1.65e-08!7 | ||
|ontology_enrichment_celltype_v019=CL:0002563;1.03e-17;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.03e-17,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3151!1.25e-07!1;DOID:3149!1.25e-07!1;DOID:0050619!2.66e-07!1;DOID:1357!2.66e-07!1 | |ontology_enrichment_disease=DOID:3151!1.25e-07!1;DOID:3149!1.25e-07!1;DOID:0050619!2.66e-07!1;DOID:1357!2.66e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:5409;8.69e-18;4!DOID:4362;1.40e-14;5!DOID:1325;8.99e-11;7!DOID:3904;8.99e-11;7!DOID:3905;1.12e-08;9 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,8.69e-18,4;DOID:4362,1.40e-14,5;DOID:1325,8.99e-11,7;DOID:3904,8.99e-11,7;DOID:3905,1.12e-08,9 | |||
|ontology_enrichment_uberon=UBERON:0001154!1.33e-07!1;UBERON:0001153!1.33e-07!1;UBERON:0001764!2.66e-07!1;UBERON:0001825!2.66e-07!1 | |ontology_enrichment_uberon=UBERON:0001154!1.33e-07!1;UBERON:0001153!1.33e-07!1;UBERON:0001764!2.66e-07!1;UBERON:0001825!2.66e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0001242;1.03e-17;4!UBERON:0001262;1.03e-17;4!UBERON:0004786;1.03e-17;4!UBERON:0004808;1.03e-17;4!UBERON:0001277;1.03e-17;4!UBERON:0000002;2.19e-12;6!UBERON:0001560;2.19e-12;6!UBERON:0000485;9.89e-11;7!UBERON:0003929;9.89e-11;7!UBERON:0003350;1.47e-09;8!UBERON:0005911;1.30e-08;36 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,1.03e-17,4;UBERON:0001262,1.03e-17,4;UBERON:0004786,1.03e-17,4;UBERON:0004808,1.03e-17,4;UBERON:0001277,1.03e-17,4;UBERON:0000002,2.19e-12,6;UBERON:0001560,2.19e-12,6;UBERON:0003350,1.47e-09,8;UBERON:0000485,1.21e-08,9 | |||
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|short_description=p@chr5:134906674..134906690,+ | |short_description=p@chr5:134906674..134906690,+ | ||
}} | }} |
Latest revision as of 09:58, 30 July 2015
Short description: | p@chr5:134906674..134906690, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:134906674..134906690, + |
Coexpression cluster: | C607_small_cervical_Keratinocyte_Sebocyte_maxillary_normal_skin |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.03e-17 | 4 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 1.03e-17 | 4 |
wall of intestine | 1.03e-17 | 4 |
gastrointestinal system mucosa | 1.03e-17 | 4 |
gastrointestinal system epithelium | 1.03e-17 | 4 |
intestinal epithelium | 1.03e-17 | 4 |
uterine cervix | 2.19e-12 | 6 |
neck of organ | 2.19e-12 | 6 |
epithelium of mucosa | 1.47e-09 | 8 |
simple columnar epithelium | 1.21e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 8.69e-18 | 4 |
cervical cancer | 1.40e-14 | 5 |
bronchus cancer | 8.99e-11 | 7 |
bronchogenic carcinoma | 8.99e-11 | 7 |
lung carcinoma | 1.12e-08 | 9 |