FFCP PHASE1:Hg19::chr1:44018828..44018844,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:44018828..44018844,+ | |||
|description=CAGE_peak_at_chr1:44018828..44018844,+ | |description=CAGE_peak_at_chr1:44018828..44018844,+ | ||
|id=chr1:44018828..44018844,+ | |id=chr1:44018828..44018844,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000077;5.81e-19;19!CL:0000182;3.44e-17;12!CL:0002097;1.56e-12;2!CL:0000174;8.63e-09;3!CL:0000632;1.40e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,5.81e-19,19;CL:0000182,3.44e-17,12;CL:0002097,1.65e-12,2;CL:0000174,8.96e-09,3;CL:0000632,1.40e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.12e-15!115;UBERON:0005057!2.85e-10!26;UBERON:0007499!5.45e-09!25;UBERON:0009856!1.41e-08!26;UBERON:0001893!5.62e-08!34;UBERON:0002780!1.27e-07!41;UBERON:0001890!1.27e-07!41;UBERON:0006240!1.27e-07!41;UBERON:0002107!1.36e-07!19;UBERON:0006925!1.36e-07!19;UBERON:0008836!1.36e-07!19;UBERON:0001042!1.50e-07!10;UBERON:0009145!1.50e-07!10;UBERON:0003080!2.18e-07!42;UBERON:0002368!2.54e-07!35;UBERON:0009497!3.65e-07!25;UBERON:0000015!3.65e-07!25;UBERON:0002423!3.65e-07!25;UBERON:0006235!3.65e-07!25;UBERON:0004161!3.65e-07!25;UBERON:0003075!6.49e-07!86;UBERON:0007284!6.49e-07!86;UBERON:0001049!7.59e-07!57;UBERON:0005068!7.59e-07!57;UBERON:0006241!7.59e-07!57;UBERON:0007135!7.59e-07!57;UBERON:0002791!7.76e-07!33;UBERON:0006562!7.83e-07!11 | |ontology_enrichment_uberon=UBERON:0007023!9.12e-15!115;UBERON:0005057!2.85e-10!26;UBERON:0007499!5.45e-09!25;UBERON:0009856!1.41e-08!26;UBERON:0001893!5.62e-08!34;UBERON:0002780!1.27e-07!41;UBERON:0001890!1.27e-07!41;UBERON:0006240!1.27e-07!41;UBERON:0002107!1.36e-07!19;UBERON:0006925!1.36e-07!19;UBERON:0008836!1.36e-07!19;UBERON:0001042!1.50e-07!10;UBERON:0009145!1.50e-07!10;UBERON:0003080!2.18e-07!42;UBERON:0002368!2.54e-07!35;UBERON:0009497!3.65e-07!25;UBERON:0000015!3.65e-07!25;UBERON:0002423!3.65e-07!25;UBERON:0006235!3.65e-07!25;UBERON:0004161!3.65e-07!25;UBERON:0003075!6.49e-07!86;UBERON:0007284!6.49e-07!86;UBERON:0001049!7.59e-07!57;UBERON:0005068!7.59e-07!57;UBERON:0006241!7.59e-07!57;UBERON:0007135!7.59e-07!57;UBERON:0002791!7.76e-07!33;UBERON:0006562!7.83e-07!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;4.84e-29;19!UBERON:0006925;4.84e-29;19!UBERON:0002423;3.71e-22;25!UBERON:0002368;4.76e-21;33!UBERON:0002365;1.63e-18;31!UBERON:0002330;1.63e-18;31!UBERON:0000949;1.14e-17;43!UBERON:0005172;3.38e-13;52!UBERON:0005173;3.38e-13;52!UBERON:0002530;7.93e-10;57!UBERON:0002369;8.63e-09;3!UBERON:0001235;8.63e-09;3!UBERON:0006858;8.63e-09;3!UBERON:0002417;7.42e-08;58!UBERON:0000916;7.42e-08;58 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,4.84e-29,19;UBERON:0006925,4.84e-29,19;UBERON:0008836,4.84e-29,19;UBERON:0008835,3.93e-25,22;UBERON:0003894,3.93e-25,22;UBERON:0009854,4.70e-24,23;UBERON:0002368,1.16e-22,35;UBERON:0007499,3.71e-22,25;UBERON:0009497,3.71e-22,25;UBERON:0000015,3.71e-22,25;UBERON:0002423,3.71e-22,25;UBERON:0006235,3.71e-22,25;UBERON:0004161,3.71e-22,25;UBERON:0009856,2.57e-21,26;UBERON:0002365,6.31e-18,31;UBERON:0002330,6.31e-18,31;UBERON:0000949,1.19e-17,45;UBERON:0005172,1.01e-14,54;UBERON:0005173,1.01e-14,54;UBERON:0002530,1.77e-13,59;UBERON:0002417,2.97e-13,60;UBERON:0000916,2.97e-13,60;UBERON:0003929,2.21e-10,54;UBERON:0002369,8.96e-09,3;UBERON:0001235,8.96e-09,3;UBERON:0006858,8.96e-09,3;UBERON:0005177,7.38e-08,101;UBERON:0009569,4.47e-07,112;UBERON:0005911,7.13e-07,82 | |||
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| ||
|short_description=p@chr1:44018828..44018844,+ | |short_description=p@chr1:44018828..44018844,+ | ||
}} | }} |
Latest revision as of 08:28, 28 July 2015
Short description: | p@chr1:44018828..44018844, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:44018828..44018844, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 5.81e-19 | 19 |
hepatocyte | 3.44e-17 | 12 |
cortical cell of adrenal gland | 1.65e-12 | 2 |
steroid hormone secreting cell | 8.96e-09 | 3 |
hepatic stellate cell | 1.40e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
liver | 4.84e-29 | 19 |
digestive gland | 4.84e-29 | 19 |
liver bud | 4.84e-29 | 19 |
hepatic diverticulum | 3.93e-25 | 22 |
liver primordium | 3.93e-25 | 22 |
digestive tract diverticulum | 4.70e-24 | 23 |
endocrine gland | 1.16e-22 | 35 |
epithelial sac | 3.71e-22 | 25 |
epithelium of foregut-midgut junction | 3.71e-22 | 25 |
anatomical boundary | 3.71e-22 | 25 |
hepatobiliary system | 3.71e-22 | 25 |
foregut-midgut junction | 3.71e-22 | 25 |
septum transversum | 3.71e-22 | 25 |
sac | 2.57e-21 | 26 |
exocrine gland | 6.31e-18 | 31 |
exocrine system | 6.31e-18 | 31 |
endocrine system | 1.19e-17 | 45 |
abdomen element | 1.01e-14 | 54 |
abdominal segment element | 1.01e-14 | 54 |
gland | 1.77e-13 | 59 |
abdominal segment of trunk | 2.97e-13 | 60 |
abdomen | 2.97e-13 | 60 |
gut epithelium | 2.21e-10 | 54 |
adrenal gland | 8.96e-09 | 3 |
adrenal cortex | 8.96e-09 | 3 |
adrenal/interrenal gland | 8.96e-09 | 3 |
trunk region element | 7.38e-08 | 101 |
subdivision of trunk | 4.47e-07 | 112 |
endo-epithelium | 7.13e-07 | 82 |