FFCP PHASE1:Hg19::chr3:185270305..185270319,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=200879 | |EntrezGene=200879 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18483 | |HGNC=18483 | ||
|TSSclassifier=strong | |||
|UniProt=F8WE09 | |UniProt=F8WE09 | ||
|association_with_transcript=-7bp_to_ENST00000429510_5end | |association_with_transcript=-7bp_to_ENST00000429510_5end | ||
|cluster_id=chr3:185270305..185270319,- | |||
|coexpression_cluster_id=C4309 | |coexpression_cluster_id=C4309 | ||
|description=CAGE_peak_5_at_LIPH_5end | |description=CAGE_peak_5_at_LIPH_5end | ||
|id=chr3:185270305..185270319,- | |id=chr3:185270305..185270319,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:1000415;8.49e-11;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1000415,1.04e-10,2 | |||
|ontology_enrichment_development_v019=UBERON:0001041;5.85e-07;30 | |||
|ontology_enrichment_disease=DOID:305!5.47e-14!106;DOID:0050687!2.16e-08!143;DOID:1749!4.46e-08!14;DOID:299!6.07e-08!25 | |ontology_enrichment_disease=DOID:305!5.47e-14!106;DOID:0050687!2.16e-08!143;DOID:1749!4.46e-08!14;DOID:299!6.07e-08!25 | ||
|ontology_enrichment_disease_v019=DOID:4929;1.68e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4929,1.73e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.38e-11!169;UBERON:0000925!1.38e-11!169;UBERON:0006595!1.38e-11!169;UBERON:0001007!4.65e-11!155;UBERON:0001555!4.65e-11!155;UBERON:0007026!4.65e-11!155;UBERON:0004921!6.87e-11!129;UBERON:0004185!6.87e-11!129;UBERON:0000077!2.74e-09!130;UBERON:0007023!3.19e-09!115;UBERON:0001041!1.17e-07!98;UBERON:0005911!1.26e-07!82;UBERON:0000481!2.61e-07!347;UBERON:0002294!3.71e-07!7;UBERON:0001173!3.71e-07!7;UBERON:0004912!3.71e-07!7 | |ontology_enrichment_uberon=UBERON:0004119!1.38e-11!169;UBERON:0000925!1.38e-11!169;UBERON:0006595!1.38e-11!169;UBERON:0001007!4.65e-11!155;UBERON:0001555!4.65e-11!155;UBERON:0007026!4.65e-11!155;UBERON:0004921!6.87e-11!129;UBERON:0004185!6.87e-11!129;UBERON:0000077!2.74e-09!130;UBERON:0007023!3.19e-09!115;UBERON:0001041!1.17e-07!98;UBERON:0005911!1.26e-07!82;UBERON:0000481!2.61e-07!347;UBERON:0002294!3.71e-07!7;UBERON:0001173!3.71e-07!7;UBERON:0004912!3.71e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0004921;2.12e-12;33!UBERON:0002294;1.80e-11;7!UBERON:0001173;1.80e-11;7!UBERON:0006562;2.13e-10;2!UBERON:0005409;2.16e-09;22!UBERON:0000160;5.00e-09;17!UBERON:0002110;1.80e-07;3!UBERON:0002048;2.41e-07;22!UBERON:0000117;2.41e-07;22!UBERON:0000171;2.41e-07;22!UBERON:0000170;2.41e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,7.01e-11,25;UBERON:0004921,2.61e-10,118;UBERON:0001007,8.76e-10,145;UBERON:0001555,8.76e-10,145;UBERON:0007026,8.76e-10,145;UBERON:0004119,1.70e-09,160;UBERON:0000925,1.70e-09,160;UBERON:0006595,1.70e-09,160;UBERON:0000160,3.78e-09,17;UBERON:0002294,7.14e-09,9;UBERON:0001173,7.14e-09,9;UBERON:0004912,7.14e-09,9;UBERON:0002110,2.06e-07,3;UBERON:0006242,2.06e-07,3;UBERON:0002048,2.79e-07,22;UBERON:0000117,2.79e-07,22;UBERON:0000171,2.79e-07,22;UBERON:0000170,2.79e-07,22;UBERON:0005597,2.79e-07,22;UBERON:0000118,2.79e-07,22;UBERON:0001041,8.97e-07,87 | |||
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| ||
|short_description=p5@LIPH | |short_description=p5@LIPH | ||
}} | }} |
Latest revision as of 03:47, 17 September 2015
Short description: | p5@LIPH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_LIPH_5end |
Coexpression cluster: | C4309_splenic_tubular_lung_signet_Intestinal_gall_throat |
Association with transcript: | -7bp_to_ENST00000429510_5end |
EntrezGene: | LIPH |
HGNC: | 18483 |
UniProt: | F8WE09 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of gall bladder | 1.04e-10 | 2 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 7.01e-11 | 25 |
subdivision of digestive tract | 2.61e-10 | 118 |
digestive system | 8.76e-10 | 145 |
digestive tract | 8.76e-10 | 145 |
primitive gut | 8.76e-10 | 145 |
endoderm-derived structure | 1.70e-09 | 160 |
endoderm | 1.70e-09 | 160 |
presumptive endoderm | 1.70e-09 | 160 |
intestine | 3.78e-09 | 17 |
biliary system | 7.14e-09 | 9 |
biliary tree | 7.14e-09 | 9 |
biliary bud | 7.14e-09 | 9 |
gallbladder | 2.06e-07 | 3 |
gall bladder primordium | 2.06e-07 | 3 |
lung | 2.79e-07 | 22 |
respiratory tube | 2.79e-07 | 22 |
respiration organ | 2.79e-07 | 22 |
pair of lungs | 2.79e-07 | 22 |
lung primordium | 2.79e-07 | 22 |
lung bud | 2.79e-07 | 22 |
foregut | 8.97e-07 | 87 |
Ontology term | p-value | n |
---|---|---|
tubular adenocarcinoma | 1.73e-11 | 2 |