FFCP PHASE1:Hg19::chr1:84873943..84873958,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=58511 | |EntrezGene=58511 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28875 | |HGNC=28875 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=30bp_to_ENST00000370662_5end | |association_with_transcript=30bp_to_ENST00000370662_5end | ||
|cluster_id=chr1:84873943..84873958,+ | |||
|coexpression_cluster_id=C70 | |coexpression_cluster_id=C70 | ||
|description=CAGE_peak_2_at_DNASE2B_5end | |description=CAGE_peak_2_at_DNASE2B_5end | ||
|id=chr1:84873943..84873958,+ | |id=chr1:84873943..84873958,+ | ||
|ontology_enrichment_celltype=CL:0000839!5.92e-17!70;CL:0000557!1.19e-16!71;CL:0002194!2.09e-15!63;CL:0000576!2.09e-15!63;CL:0000040!2.09e-15!63;CL:0000559!2.09e-15!63;CL:0000766!2.98e-15!76;CL:0002009!8.28e-15!65;CL:0000235!2.34e-14!10;CL:0000763!6.78e-09!112;CL:0000049!6.78e-09!112;CL:0002031!1.30e-07!124 | |ontology_enrichment_celltype=CL:0000839!5.92e-17!70;CL:0000557!1.19e-16!71;CL:0002194!2.09e-15!63;CL:0000576!2.09e-15!63;CL:0000040!2.09e-15!63;CL:0000559!2.09e-15!63;CL:0000766!2.98e-15!76;CL:0002009!8.28e-15!65;CL:0000235!2.34e-14!10;CL:0000763!6.78e-09!112;CL:0000049!6.78e-09!112;CL:0002031!1.30e-07!124 | ||
|ontology_enrichment_celltype_v019=CL:0000235;1.57e-35;6!CL:0002567;1.30e-18;3!CL:0002566;2.41e-14;1!CL:0000148;1.85e-12;10!CL:0000147;4.61e-09;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,1.37e-35,6;CL:0002567,1.62e-18,3;CL:0002566,1.84e-14,1;CL:0000148,1.89e-12,10;CL:0000541,1.89e-12,10;CL:0000147,4.68e-09,14 | |||
|ontology_enrichment_development_v019=UBERON:0008801;4.73e-15;1!UBERON:0006298;6.22e-15;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1909;5.37e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,5.37e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0002371!2.93e-14!80;UBERON:0001474!6.05e-13!86;UBERON:0002390!1.15e-12!102;UBERON:0003061!1.15e-12!102;UBERON:0002193!2.36e-12!112;UBERON:0007023!6.42e-12!115;UBERON:0002405!6.81e-12!115;UBERON:0004765!2.39e-10!101;UBERON:0001434!2.39e-10!101;UBERON:0001829!1.35e-09!2;UBERON:0001954!1.46e-08!2;UBERON:0003022!1.46e-08!2;UBERON:0002421!1.46e-08!2;UBERON:0002600!1.46e-08!2;UBERON:0003127!2.90e-08!2;UBERON:0001044!6.01e-07!6;UBERON:0003293!6.01e-07!6;UBERON:0003294!6.01e-07!6;UBERON:0010047!6.01e-07!6;UBERON:0000167!6.01e-07!6 | |ontology_enrichment_uberon=UBERON:0002371!2.93e-14!80;UBERON:0001474!6.05e-13!86;UBERON:0002390!1.15e-12!102;UBERON:0003061!1.15e-12!102;UBERON:0002193!2.36e-12!112;UBERON:0007023!6.42e-12!115;UBERON:0002405!6.81e-12!115;UBERON:0004765!2.39e-10!101;UBERON:0001434!2.39e-10!101;UBERON:0001829!1.35e-09!2;UBERON:0001954!1.46e-08!2;UBERON:0003022!1.46e-08!2;UBERON:0002421!1.46e-08!2;UBERON:0002600!1.46e-08!2;UBERON:0003127!2.90e-08!2;UBERON:0001044!6.01e-07!6;UBERON:0003293!6.01e-07!6;UBERON:0003294!6.01e-07!6;UBERON:0010047!6.01e-07!6;UBERON:0000167!6.01e-07!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0001829;3.60e-28;2!UBERON:0001044;4.86e-21;6!UBERON:0003293;4.86e-21;6!UBERON:0003294;4.86e-21;6!UBERON:0010047;4.86e-21;6!UBERON:0003408;4.86e-21;6!UBERON:0000167;4.86e-21;6!UBERON:0001831;4.73e-15;1!UBERON:0001567;4.73e-15;1!UBERON:0001736;6.22e-15;1!UBERON:0002171;1.41e-14;1!UBERON:0006518;1.41e-14;1!UBERON:0008949;1.41e-14;1!UBERON:0000101;1.41e-14;1!UBERON:0002167;1.41e-14;1!UBERON:0001041;2.32e-09;14!UBERON:0004089;3.56e-08;2!UBERON:0000161;4.98e-07;19!UBERON:0000166;4.98e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,3.60e-28,2;UBERON:0001044,4.86e-21,6;UBERON:0003293,4.86e-21,6;UBERON:0003294,4.86e-21,6;UBERON:0010047,4.86e-21,6;UBERON:0000167,4.86e-21,6;UBERON:0001831,4.73e-15,1;UBERON:0001567,4.73e-15,1;UBERON:0008801,4.73e-15,1;UBERON:0001736,6.22e-15,1;UBERON:0006298,6.22e-15,1;UBERON:0002171,1.61e-14,1;UBERON:0006518,1.61e-14,1;UBERON:0008949,1.61e-14,1;UBERON:0000101,1.61e-14,1;UBERON:0002167,1.61e-14,1;UBERON:0003408,7.01e-13,10;UBERON:0004089,3.56e-08,2 | |||
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| ||
|short_description=p2@DNASE2B | |short_description=p2@DNASE2B | ||
}} | }} |
Latest revision as of 11:59, 19 September 2015
Short description: | p2@DNASE2B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_DNASE2B_5end |
Coexpression cluster: | C70_parotid_submaxillary_salivary_throat_trachea_aorta_tongue |
Association with transcript: | 30bp_to_ENST00000370662_5end |
EntrezGene: | DNASE2B |
HGNC: | 28875 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 1.37e-35 | 6 |
light melanocyte | 1.62e-18 | 3 |
dark melanocyte | 1.84e-14 | 1 |
melanocyte | 1.89e-12 | 10 |
melanoblast | 1.89e-12 | 10 |
pigment cell | 4.68e-09 | 14 |
Ontology term | p-value | n |
---|---|---|
major salivary gland | 3.60e-28 | 2 |
saliva-secreting gland | 4.86e-21 | 6 |
gland of oral region | 4.86e-21 | 6 |
gland of foregut | 4.86e-21 | 6 |
oral gland | 4.86e-21 | 6 |
oral cavity | 4.86e-21 | 6 |
parotid gland | 4.73e-15 | 1 |
cheek | 4.73e-15 | 1 |
parotid gland primordium | 4.73e-15 | 1 |
submandibular gland | 6.22e-15 | 1 |
submandibular gland primordium | 6.22e-15 | 1 |
lower lobe of right lung | 1.61e-14 | 1 |
right lung lobe | 1.61e-14 | 1 |
lower lobe of lung | 1.61e-14 | 1 |
lobe of lung | 1.61e-14 | 1 |
right lung | 1.61e-14 | 1 |
gland of gut | 7.01e-13 | 10 |
midface | 3.56e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
melanoma | 5.37e-08 | 2 |