FFCP PHASE1:Hg19::chr1:192708615..192708631,-: Difference between revisions
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|id=chr1:192708615..192708631,-
|short_description=p@chr1:192708615..192708631,-
|description=CAGE_peak_at_chr1:192708615..192708631,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:192708615..192708631,- | |||
|description=CAGE_peak_at_chr1:192708615..192708631,- | |||
|id=chr1:192708615..192708631,- | |||
|ontology_enrichment_celltype=CL:0000223!4.79e-14!59;CL:0002178!6.40e-08!3;CL:0002251!7.66e-08!21;CL:0002076!1.04e-07!43;CL:0000181!8.22e-07!12;CL:0000417!8.22e-07!12;CL:0000668!8.22e-07!12;CL:0000414!8.22e-07!12;CL:0000412!8.22e-07!12;CL:0000182!8.22e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0002251;2.00e-10;20!CL:0000222;3.20e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000223,9.62e-11,58;CL:0002251,1.87e-10,20;CL:0000066,2.83e-07,253 | |||
|ontology_enrichment_development_v019=CL:0000223;7.52e-08;58 | |||
|ontology_enrichment_disease=DOID:305!5.62e-20!106;DOID:0050687!1.29e-17!143;DOID:299!5.98e-16!25;DOID:162!8.15e-15!235;DOID:14566!3.20e-14!239;DOID:1749!3.21e-08!14;DOID:3119!2.93e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;9.17e-21;14!DOID:299;1.79e-08;25!DOID:6193;6.59e-08;1!DOID:5662;7.50e-08;1!DOID:305;1.47e-07;106!DOID:0050619;3.20e-07;1!DOID:1357;3.20e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,8.52e-21,14;DOID:0050687,4.69e-20,143;DOID:305,3.89e-19,106;DOID:162,4.87e-15,235;DOID:14566,1.30e-14,239;DOID:299,1.66e-08,25;DOID:6193,6.59e-08,1;DOID:5662,7.50e-08,1;DOID:0050619,3.40e-07,1;DOID:1357,3.40e-07,1;DOID:7,8.38e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0005409!2.84e-09!35;UBERON:0000344!8.49e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0003343;4.83e-14;4!UBERON:0004785;4.83e-14;4!UBERON:0000974;1.56e-09;6!UBERON:0000997;1.21e-07;1!UBERON:0004913;1.21e-07;1!UBERON:0005056;1.21e-07;1!UBERON:0003703;1.21e-07;1!UBERON:0004176;1.21e-07;1!UBERON:0001174;1.21e-07;1!UBERON:0004914;1.21e-07;1!UBERON:0001764;3.20e-07;1!UBERON:0001825;3.20e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003343,4.73e-14,4;UBERON:0004785,4.73e-14,4;UBERON:0000997,1.18e-07,1;UBERON:0005056,1.18e-07,1;UBERON:0004913,1.51e-07,1;UBERON:0003703,1.51e-07,1;UBERON:0001174,1.51e-07,1;UBERON:0004914,1.51e-07,1;UBERON:0001764,3.40e-07,1;UBERON:0001825,3.40e-07,1 | |||
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| ||
|short_description=p@chr1:192708615..192708631,- | |||
}} | }} |
Latest revision as of 01:40, 28 July 2015
Short description: | p@chr1:192708615..192708631, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:192708615..192708631, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endodermal cell | 9.62e-11 | 58 |
epithelial cell of alimentary canal | 1.87e-10 | 20 |
epithelial cell | 2.83e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
mucosa of oral region | 4.73e-14 | 4 |
respiratory system mucosa | 4.73e-14 | 4 |
mammalian vulva | 1.18e-07 | 1 |
external female genitalia | 1.18e-07 | 1 |
hepatopancreatic ampulla | 1.51e-07 | 1 |
extrahepatic bile duct | 1.51e-07 | 1 |
common bile duct | 1.51e-07 | 1 |
duodenal papilla | 1.51e-07 | 1 |
maxillary sinus | 3.40e-07 | 1 |
paranasal sinus | 3.40e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 8.52e-21 | 14 |
cell type cancer | 4.69e-20 | 143 |
carcinoma | 3.89e-19 | 106 |
cancer | 4.87e-15 | 235 |
disease of cellular proliferation | 1.30e-14 | 239 |
adenocarcinoma | 1.66e-08 | 25 |
epithelioid sarcoma | 6.59e-08 | 1 |
pleomorphic carcinoma | 7.50e-08 | 1 |
paranasal sinus cancer | 3.40e-07 | 1 |
maxillary sinus cancer | 3.40e-07 | 1 |
disease of anatomical entity | 8.38e-07 | 39 |