FFCP PHASE1:Hg19::chr15:65067734..65067746,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=348093 | |EntrezGene=348093 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19098 | |HGNC=19098 | ||
|TSSclassifier=strong | |||
|UniProt=Q6ZRY4 | |UniProt=Q6ZRY4 | ||
|association_with_transcript=23bp_to_NM_194272,uc002anq.2_5end | |association_with_transcript=23bp_to_NM_194272,uc002anq.2_5end | ||
|cluster_id=chr15:65067734..65067746,- | |||
|coexpression_cluster_id=C45 | |coexpression_cluster_id=C45 | ||
|description=CAGE_peak_4_at_RBPMS2_5end | |description=CAGE_peak_4_at_RBPMS2_5end | ||
|id=chr15:65067734..65067746,- | |id=chr15:65067734..65067746,- | ||
|ontology_enrichment_celltype=CL:0002322!9.14e-09!5;CL:0000039!5.84e-08!7;CL:0000586!5.84e-08!7 | |ontology_enrichment_celltype=CL:0002322!9.14e-09!5;CL:0000039!5.84e-08!7;CL:0000586!5.84e-08!7 | ||
|ontology_enrichment_celltype_v019=CL:0002322;1.49e-24;5!CL:0000039;3.90e-12;7!CL:0000586;3.90e-12;7!CL:0000540;3.70e-08;6!CL:0000404;3.70e-08;6!CL:0002321;5.18e-08;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.29e-24,5;CL:0000039,3.96e-12,7;CL:0000586,3.96e-12,7;CL:0000540,3.66e-08,6;CL:0000031,3.66e-08,6;CL:0000404,3.66e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.06e-12;10!UBERON:0005564;1.06e-12;10!UBERON:0006603;9.89e-09;65!CL:0000031;3.70e-08;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:114;5.21e-11;2!DOID:3095;7.60e-08;22!DOID:2994;7.60e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:114,4.96e-11,2;DOID:3095,7.70e-08,22;DOID:2994,7.70e-08,22 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.26e-19!115;UBERON:0003135!2.33e-12!11;UBERON:0000473!3.45e-09!8;UBERON:0003101!2.04e-08!22;UBERON:0000079!2.04e-08!22 | |ontology_enrichment_uberon=UBERON:0007023!1.26e-19!115;UBERON:0003135!2.33e-12!11;UBERON:0000473!3.45e-09!8;UBERON:0003101!2.04e-08!22;UBERON:0000079!2.04e-08!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0003135;2.21e-11;11!UBERON:0007100;3.14e-11;25!UBERON:0000922;4.85e-11;49!UBERON:0000473;1.27e-10;8!UBERON:0003101;1.31e-07;22!UBERON:0000079;1.31e-07;22!UBERON:0004151;1.42e-07;3!UBERON:0003978;2.97e-07;3!UBERON:0000946;2.97e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003135,2.15e-11,11;UBERON:0000473,1.28e-10,8;UBERON:0007100,2.44e-10,27;UBERON:0003101,1.19e-07,22;UBERON:0000079,1.19e-07,22;UBERON:0004151,1.44e-07,3;UBERON:0003978,2.66e-07,3;UBERON:0009751,2.66e-07,3;UBERON:0000946,2.66e-07,3;UBERON:0002523,2.66e-07,3;UBERON:0005983,2.66e-07,3;UBERON:0002165,2.66e-07,3;UBERON:0002062,2.66e-07,3;UBERON:0007280,2.66e-07,3;UBERON:0007023,2.94e-07,114 | |||
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| ||
|short_description=p4@RBPMS2 | |short_description=p4@RBPMS2 | ||
}} | }} |
Latest revision as of 13:54, 18 September 2015
Short description: | p4@RBPMS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_RBPMS2_5end |
Coexpression cluster: | C45_testicular_choriocarcinoma_H9_teratocarcinoma_Wilms_pancreatic_iPS |
Association with transcript: | 23bp_to_NM_194272, uc002anq.2_5end |
EntrezGene: | RBPMS2 |
HGNC: | 19098 |
UniProt: | Q6ZRY4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.29e-24 | 5 |
germ line cell | 3.96e-12 | 7 |
germ cell | 3.96e-12 | 7 |
neuron | 3.66e-08 | 6 |
neuroblast | 3.66e-08 | 6 |
electrically signaling cell | 3.66e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
male reproductive organ | 2.15e-11 | 11 |
testis | 1.28e-10 | 8 |
primary circulatory organ | 2.44e-10 | 27 |
male organism | 1.19e-07 | 22 |
male reproductive system | 1.19e-07 | 22 |
cardiac chamber | 1.44e-07 | 3 |
valve | 2.66e-07 | 3 |
cardiac mesenchyme | 2.66e-07 | 3 |
cardial valve | 2.66e-07 | 3 |
tunica intima | 2.66e-07 | 3 |
heart layer | 2.66e-07 | 3 |
endocardium | 2.66e-07 | 3 |
endocardial cushion | 2.66e-07 | 3 |
presumptive endocardium | 2.66e-07 | 3 |
adult organism | 2.94e-07 | 114 |
Ontology term | p-value | n |
---|---|---|
heart disease | 4.96e-11 | 2 |
germ cell and embryonal cancer | 7.70e-08 | 22 |
germ cell cancer | 7.70e-08 | 22 |