FFCP PHASE1:Hg19::chr10:3824576..3824590,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
|||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1316 | |EntrezGene=1316 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2235 | |HGNC=2235 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-333bp_to_ENST00000173785_5end | |association_with_transcript=-333bp_to_ENST00000173785_5end | ||
|cluster_id=chr10:3824576..3824590,- | |||
|coexpression_cluster_id=C29 | |coexpression_cluster_id=C29 | ||
|description=CAGE_peak_21_at_KLF6_5end | |description=CAGE_peak_21_at_KLF6_5end | ||
|id=chr10:3824576..3824590,- | |id=chr10:3824576..3824590,- | ||
|ontology_enrichment_celltype=CL:0000990!5.74e-07!8 | |ontology_enrichment_celltype=CL:0000990!5.74e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0001014;1.56e-18;2!CL:0001016;1.56e-18;2!CL:0002541;1.33e-12;3!CL:0000136;2.29e-11;13!CL:0000453;5.89e-08;5!CL:0000097;7.90e-08;5!CL:0000840;9.15e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,1.43e-18,2;CL:0001016,1.43e-18,2;CL:0002541,1.59e-12,3;CL:0000136,7.17e-10,15;CL:0000453,5.69e-08,5;CL:0000097,8.61e-08,5;CL:0002028,8.61e-08,5;CL:0000840,8.89e-07,5;CL:0001029,8.89e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0000358;3.88e-10;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:6193;3.88e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,3.10e-10,1 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;1.33e-12;3!UBERON:0000920;1.33e-12;3!UBERON:0002426;3.88e-10;1!UBERON:0003831;3.88e-10;1!UBERON:0003898;3.88e-10;1!UBERON:0004830;3.88e-10;1!UBERON:0003830;3.88e-10;1!UBERON:0005175;3.88e-10;1!UBERON:0001774;3.88e-10;1!UBERON:0001103;3.88e-10;1!UBERON:0007029;8.24e-10;1!UBERON:0005631;2.46e-08;10!UBERON:0000158;2.46e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,1.59e-12,3;UBERON:0002426,4.06e-10,1;UBERON:0003831,4.06e-10,1;UBERON:0003898,4.06e-10,1;UBERON:0004830,4.06e-10,1;UBERON:0003830,4.06e-10,1;UBERON:0005175,4.06e-10,1;UBERON:0001774,4.06e-10,1;UBERON:0001103,4.06e-10,1;UBERON:0010084,4.06e-10,1;UBERON:0007029,5.79e-10,1 | |||
|phase1_expression=0.363356758541113,0,0.422863212287913,0,0,0,0,0,0.522371256399677,0.245733936501509,0,0.218441372130172,0.527533956456907,0,0,0,0,0.730310090387373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434021741431704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0.290209238628584,0,0,0.251248665256743,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0.570025487482497,0,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0.128091319725675,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24930726552346,0,0,0,0.267440195783507,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0.324547393654683,0.174129737299267,0,0.238490624305342,0,0,0,0,0,0.56530794192401,0,0,0,0,0.35576626268671,0.66944122552934,0,0,0.24406205754817,0,0,0.0892997282840798,0,0,0,0,0,0,7.75560528296651,0,0.496971951695318,0.25326102332916,0.926864265692532,0.860509862246441,0,0,0,0,0,0.134710672069688,0.163461903113459,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0.300476117813194,0.113432183160021,0,0,0.211931901159562,0.600182192168805,0,0,0,0.843881661206331,0.389748020644795,0,0,0.161646056818812,2.13005755509969,0,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0.462985512576611,0.190254152234598,0,0,0,0.234004265139238,0,0,0,0,0.268675568108545,0,0,0,0,2.69526550203004,0.864719720501769,1.00993946741104,0.063497894292169,0.381988425558278,0,0,0,0,0,0,0,0.07333828582095,0.517086863031111,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0.099972991182057,0,0.502257091432126,0,0,0,0,0.144781306667579,0,0,0,0.197030760201927,0.431255149719035,0.128343036279748,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0.207970861530807,0.178428988797162,0.157702415033935,0,0,0,0,0.664225598535437,0,0.0868836144680828,0,0,0.206768026122887,0.431428401637234,0.106727557803444,0.303127571446259,0,0,0.248107807818777,0.767309866440312,0.280660094433074,0,0.511707249066704,0,0,0,0,0.0821271560138091,0,0.116210378459959,0,0,0,0,0,0,0,0.15403067420883,0,0,0.211103257785751,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0.255225424989168,0.10115778085555,0,0.31481234683064,0,0,0.532306030317022,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0.422215270595328,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0.648473311192717,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879049075631364,0,0,0.284136146806413,0.71623345421307,0,1.22864280839693,0,0,0,0,0,0.597743964753209,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0.185536196323703,0,0,0.262379999988587,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0.23056390438806,0,0.108647371922008,4.46601623624687,0,1.06606955203727,0,0,0,0,0,0,0,0,0,0.652931232636591,0,0,0,0.265372693510018,0,0,0,0.104421949505455,0.067401132980677,2.40773294189637,0,0,0,0.242780379534093,0,0,0,0.31593289814244,0,0,0,0.330991955875499,0.313932918407225,0,0,0.138674673013139,0.173559738335131,0.391969589657511,0,0.17472666824203,2.75177651954586,0,0,0,0.290967049465258,0,0,0,0,0.0633107959558787,0,0.160317640503067,0,0.39961921916426,0,0.229073192331831,0,0,0,0.235694034616795,0,0,0,0.288950589901519,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,2.92466059016951,2.32140586367385,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0.326587360109409,0,0,0.340776043570843,0,0.146552233678082,0,0.129282956361551,0,0,0,0.213574825135389,1.41483874589699,0,0,0,0,2.55336503108073,11.424373870759,3.0082787282724,9.19036730290385,9.50830629058433,0,0.886068179966986,0,0,0,0.221858103073705,0,0,0,0,0.285465333544967,0.235265819698172,0,0,0.149254802886874,0.233713309847224,0.554805861502613,0.947015026375446,0,0,0.457680136793847,0.756154618816195,0.15543720058278,0.295710299979268,0.477890301491107,0,0.310525913752519,0.414706207840855,0,0,0.300515217994437,0,0,0.363697318405119,0.322231671127465,0,0,0.800055529326307,0,0.673498977531838,0,0.963099152036517,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.779441235357554,0.265729680626726,0.327130788511688,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0.636008701306837,0,0,0,0.3062454773532,0,0,0,0,0.252071696221718,0,0,0,0,0,0.183428598521679,0.231051332300676,0.762764190934334,0,0,0.150420656698515,0.40341013740704,0,0,0.655087670040387,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.532214220975833,0,0.342976018874837,0,0,0.118193840883968,0,0.156986185701028,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0.6828739083758,0,0.430227358820278,0.118332000730565,0.170426809518315,0.423387050190929,0.68732060563215,0,0,0,0.098150233615243,0,0,0.615976841137482,0,1.94284397223656,0,0,0,0,0,0.452888530700021,0,0,0,0.245148321753905,0,0.196308467114945,0,0,0.509781344063451,0,0,0,0,0,1.28386186702669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0.202117188958219,1.30630048738177,0,0.202056159043763,0.286888821570705,0,0.0814032686109745,0.640364075266293,0,0.0898252021065869,2.34640942403454,0,0,0.665756774185513,0,0 | |phase1_expression=0.363356758541113,0,0.422863212287913,0,0,0,0,0,0.522371256399677,0.245733936501509,0,0.218441372130172,0.527533956456907,0,0,0,0,0.730310090387373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434021741431704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0.290209238628584,0,0,0.251248665256743,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0.570025487482497,0,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0.128091319725675,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24930726552346,0,0,0,0.267440195783507,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0.324547393654683,0.174129737299267,0,0.238490624305342,0,0,0,0,0,0.56530794192401,0,0,0,0,0.35576626268671,0.66944122552934,0,0,0.24406205754817,0,0,0.0892997282840798,0,0,0,0,0,0,7.75560528296651,0,0.496971951695318,0.25326102332916,0.926864265692532,0.860509862246441,0,0,0,0,0,0.134710672069688,0.163461903113459,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0.300476117813194,0.113432183160021,0,0,0.211931901159562,0.600182192168805,0,0,0,0.843881661206331,0.389748020644795,0,0,0.161646056818812,2.13005755509969,0,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0.462985512576611,0.190254152234598,0,0,0,0.234004265139238,0,0,0,0,0.268675568108545,0,0,0,0,2.69526550203004,0.864719720501769,1.00993946741104,0.063497894292169,0.381988425558278,0,0,0,0,0,0,0,0.07333828582095,0.517086863031111,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0.099972991182057,0,0.502257091432126,0,0,0,0,0.144781306667579,0,0,0,0.197030760201927,0.431255149719035,0.128343036279748,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0.207970861530807,0.178428988797162,0.157702415033935,0,0,0,0,0.664225598535437,0,0.0868836144680828,0,0,0.206768026122887,0.431428401637234,0.106727557803444,0.303127571446259,0,0,0.248107807818777,0.767309866440312,0.280660094433074,0,0.511707249066704,0,0,0,0,0.0821271560138091,0,0.116210378459959,0,0,0,0,0,0,0,0.15403067420883,0,0,0.211103257785751,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0.255225424989168,0.10115778085555,0,0.31481234683064,0,0,0.532306030317022,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0.422215270595328,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0.648473311192717,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879049075631364,0,0,0.284136146806413,0.71623345421307,0,1.22864280839693,0,0,0,0,0,0.597743964753209,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0.185536196323703,0,0,0.262379999988587,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0.23056390438806,0,0.108647371922008,4.46601623624687,0,1.06606955203727,0,0,0,0,0,0,0,0,0,0.652931232636591,0,0,0,0.265372693510018,0,0,0,0.104421949505455,0.067401132980677,2.40773294189637,0,0,0,0.242780379534093,0,0,0,0.31593289814244,0,0,0,0.330991955875499,0.313932918407225,0,0,0.138674673013139,0.173559738335131,0.391969589657511,0,0.17472666824203,2.75177651954586,0,0,0,0.290967049465258,0,0,0,0,0.0633107959558787,0,0.160317640503067,0,0.39961921916426,0,0.229073192331831,0,0,0,0.235694034616795,0,0,0,0.288950589901519,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,2.92466059016951,2.32140586367385,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0.326587360109409,0,0,0.340776043570843,0,0.146552233678082,0,0.129282956361551,0,0,0,0.213574825135389,1.41483874589699,0,0,0,0,2.55336503108073,11.424373870759,3.0082787282724,9.19036730290385,9.50830629058433,0,0.886068179966986,0,0,0,0.221858103073705,0,0,0,0,0.285465333544967,0.235265819698172,0,0,0.149254802886874,0.233713309847224,0.554805861502613,0.947015026375446,0,0,0.457680136793847,0.756154618816195,0.15543720058278,0.295710299979268,0.477890301491107,0,0.310525913752519,0.414706207840855,0,0,0.300515217994437,0,0,0.363697318405119,0.322231671127465,0,0,0.800055529326307,0,0.673498977531838,0,0.963099152036517,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.779441235357554,0.265729680626726,0.327130788511688,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0.636008701306837,0,0,0,0.3062454773532,0,0,0,0,0.252071696221718,0,0,0,0,0,0.183428598521679,0.231051332300676,0.762764190934334,0,0,0.150420656698515,0.40341013740704,0,0,0.655087670040387,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.532214220975833,0,0.342976018874837,0,0,0.118193840883968,0,0.156986185701028,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0.6828739083758,0,0.430227358820278,0.118332000730565,0.170426809518315,0.423387050190929,0.68732060563215,0,0,0,0.098150233615243,0,0,0.615976841137482,0,1.94284397223656,0,0,0,0,0,0.452888530700021,0,0,0,0.245148321753905,0,0.196308467114945,0,0,0.509781344063451,0,0,0,0,0,1.28386186702669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0.202117188958219,1.30630048738177,0,0.202056159043763,0.286888821570705,0,0.0814032686109745,0.640364075266293,0,0.0898252021065869,2.34640942403454,0,0,0.665756774185513,0,0 | ||
|short_description=p21@KLF6 | |short_description=p21@KLF6 | ||
}} | }} |
Latest revision as of 03:01, 18 September 2015
Short description: | p21@KLF6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_21_at_KLF6_5end |
Coexpression cluster: | C29_mature_adipose_Adipocyte_breast_Lymphatic_vein_heart |
Association with transcript: | -333bp_to_ENST00000173785_5end |
EntrezGene: | KLF6 |
HGNC: | 2235 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 1.43e-18 | 2 |
immature CD1a-positive Langerhans cell | 1.43e-18 | 2 |
chorionic membrane mesenchymal stem cell | 1.59e-12 | 3 |
fat cell | 7.17e-10 | 15 |
Langerhans cell | 5.69e-08 | 5 |
mast cell | 8.61e-08 | 5 |
basophil mast progenitor cell | 8.61e-08 | 5 |
immature conventional dendritic cell | 8.89e-07 | 5 |
common dendritic progenitor | 8.89e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 1.59e-12 | 3 |
chest muscle | 4.06e-10 | 1 |
respiratory system muscle | 4.06e-10 | 1 |
skeletal muscle of trunk | 4.06e-10 | 1 |
respiratory system skeletal muscle | 4.06e-10 | 1 |
thoracic segment muscle | 4.06e-10 | 1 |
chest organ | 4.06e-10 | 1 |
muscle of trunk | 4.06e-10 | 1 |
diaphragm | 4.06e-10 | 1 |
future diaphragm | 4.06e-10 | 1 |
surface | 5.79e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 3.10e-10 | 1 |