FFCP PHASE1:Hg19::chr1:201617457..201617465,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:201617457..201617465,+
|short_description=p34@NAV1
|description=CAGE_peak_34_at_NAV1_5end
|association_with_transcript=7bp_to_ENST00000295624,ENST000003672...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=89796 | |EntrezGene=89796 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15989 | |HGNC=15989 | ||
|TSSclassifier=strong | |||
|UniProt=A8MYI2,Q8NEY1 | |UniProt=A8MYI2,Q8NEY1 | ||
|association_with_transcript=7bp_to_ENST00000295624,ENST00000367297,ENST00000367300,ENST00000391966,NM_020443,uc001gwu.2_5end | |||
|cluster_id=chr1:201617457..201617465,+ | |||
|description=CAGE_peak_34_at_NAV1_5end | |||
|id=chr1:201617457..201617465,+ | |||
|ontology_enrichment_celltype=CL:0000055!4.07e-15!180;CL:0000057!4.34e-10!75;CL:0000680!5.33e-07!57;CL:0000056!5.33e-07!57;CL:0000355!5.33e-07!57;CL:0000192!6.36e-07!42;CL:0000514!6.36e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0000097;3.85e-33;5!CL:0002591;2.71e-19;1!CL:0000163;9.20e-19;9!CL:0000047;2.48e-10;2!CL:0002582;2.63e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,1.79e-33,5;CL:0002028,1.79e-33,5;CL:0002591,4.69e-19,1;CL:0000163,6.02e-19,9;CL:0000047,7.26e-10,8;CL:0002582,2.47e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004290!6.35e-07!70 | |||
|ontology_enrichment_uberon_v019=UBERON:0000078;2.48e-10;2!UBERON:0002012;2.48e-10;2!UBERON:0008886;2.48e-10;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000078,3.27e-10,2;UBERON:0007497,3.27e-10,2;UBERON:0003643,3.27e-10,2;UBERON:0003504,3.27e-10,2;UBERON:0003469,3.27e-10,2;UBERON:0003496,3.27e-10,2;UBERON:0002012,3.27e-10,2;UBERON:0008886,3.27e-10,2;UBERON:0007303,3.27e-10,2;UBERON:0002061,3.27e-10,2;UBERON:0005432,3.27e-10,2;UBERON:0004363,3.27e-10,2;UBERON:0004145,3.16e-07,3 | |||
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| ||
|short_description=p34@NAV1 | |||
}} | }} |
Latest revision as of 18:27, 19 September 2015
Short description: | p34@NAV1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_34_at_NAV1_5end |
Coexpression cluster: | NA |
Association with transcript: | 7bp_to_ENST00000295624, ENST00000367297, ENST00000367300, ENST00000391966, NM_020443, uc001gwu.2_5end |
EntrezGene: | NAV1 |
HGNC: | 15989 |
UniProt: | A8MYI2Q8NEY1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 1.79e-33 | 5 |
basophil mast progenitor cell | 1.79e-33 | 5 |
smooth muscle cell of the pulmonary artery | 4.69e-19 | 1 |
endocrine cell | 6.02e-19 | 9 |
neuronal stem cell | 7.26e-10 | 8 |
visceral preadipocyte | 2.47e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
mixed ectoderm/mesoderm/endoderm-derived structure | 3.27e-10 | 2 |
developing epithelial placode | 3.27e-10 | 2 |
respiratory system arterial blood vessel | 3.27e-10 | 2 |
respiratory system blood vessel | 3.27e-10 | 2 |
respiratory system artery | 3.27e-10 | 2 |
head blood vessel | 3.27e-10 | 2 |
pulmonary artery | 3.27e-10 | 2 |
pulmonary vascular system | 3.27e-10 | 2 |
pharyngeal vasculature | 3.27e-10 | 2 |
truncus arteriosus | 3.27e-10 | 2 |
aortic sac | 3.27e-10 | 2 |
pharyngeal arch artery | 3.27e-10 | 2 |
outflow tract | 3.16e-07 | 3 |