FFCP PHASE1:Hg19::chr22:30476215..30476223,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000429350_5end | |association_with_transcript=0bp_to_ENST00000429350_5end | ||
|cluster_id=chr22:30476215..30476223,- | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_3_at_ENST00000429350_5end | |description=CAGE_peak_3_at_ENST00000429350_5end | ||
|id=chr22:30476215..30476223,- | |id=chr22:30476215..30476223,- | ||
|ontology_enrichment_celltype=CL:0000540!9.80e-15!6;CL:0000031!9.80e-15!6;CL:0000404!9.80e-15!6;CL:0002586!4.56e-12!3;CL:0002605!2.62e-11!3;CL:0002322!3.13e-11!5;CL:0000047!5.73e-11!8;CL:0000149!3.83e-09!4;CL:0002319!6.17e-09!25;CL:0000039!2.05e-08!7;CL:0000586!2.05e-08!7;CL:0000128!3.71e-08!7;CL:0000126!3.71e-08!7;CL:0000127!3.71e-08!7;CL:0002453!3.71e-08!7 | |ontology_enrichment_celltype=CL:0000540!9.80e-15!6;CL:0000031!9.80e-15!6;CL:0000404!9.80e-15!6;CL:0002586!4.56e-12!3;CL:0002605!2.62e-11!3;CL:0002322!3.13e-11!5;CL:0000047!5.73e-11!8;CL:0000149!3.83e-09!4;CL:0002319!6.17e-09!25;CL:0000039!2.05e-08!7;CL:0000586!2.05e-08!7;CL:0000128!3.71e-08!7;CL:0000126!3.71e-08!7;CL:0000127!3.71e-08!7;CL:0002453!3.71e-08!7 | ||
|ontology_enrichment_celltype_v019=CL:0002586;1.14e-10;3!CL:0000182;1.81e-10;12!CL:0000149;2.52e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,1.09e-10,3;CL:0000182,1.77e-10,12;CL:0000149,2.43e-08,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p3@ENST00000429350 | |short_description=p3@ENST00000429350 | ||
}} | }} |
Latest revision as of 20:02, 28 July 2015
Short description: | p3@ENST00000429350 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ENST00000429350_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000429350_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 1.09e-10 | 3 |
hepatocyte | 1.77e-10 | 12 |
visual pigment cell | 2.43e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
liver | 3.31e-14 | 19 |
digestive gland | 3.31e-14 | 19 |
liver bud | 3.31e-14 | 19 |
hepatic diverticulum | 2.26e-12 | 22 |
liver primordium | 2.26e-12 | 22 |
digestive tract diverticulum | 7.25e-12 | 23 |
epithelial sac | 5.65e-11 | 25 |
epithelium of foregut-midgut junction | 5.65e-11 | 25 |
anatomical boundary | 5.65e-11 | 25 |
hepatobiliary system | 5.65e-11 | 25 |
foregut-midgut junction | 5.65e-11 | 25 |
septum transversum | 5.65e-11 | 25 |
pigmented layer of retina | 1.09e-10 | 3 |
presumptive retinal pigmented epithelium | 1.09e-10 | 3 |
sac | 1.40e-10 | 26 |
exocrine gland | 5.54e-09 | 31 |
exocrine system | 5.54e-09 | 31 |
layer of retina | 2.43e-08 | 4 |
endocrine gland | 4.96e-08 | 35 |