FFCP PHASE1:Hg19::chr1:203491479..203491485,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:203491479..203491485,+
|short_description=p@chr1:203491479..203491485,+
|description=CAGE_peak_at_chr1:203491479..203491485,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:203491479..203491485,+ | |||
|description=CAGE_peak_at_chr1:203491479..203491485,+ | |||
|id=chr1:203491479..203491485,+ | |||
|ontology_enrichment_celltype=CL:0002319!6.19e-21!25;CL:0000133!1.09e-20!59;CL:0000221!1.08e-18!71;CL:0000333!5.26e-14!41;CL:0000095!6.82e-14!17;CL:0000123!6.82e-14!17;CL:0000243!2.04e-11!15;CL:0000125!2.04e-11!15;CL:0000030!2.04e-11!15;CL:0000339!2.04e-11!15;CL:0000540!2.92e-09!6;CL:0000031!2.92e-09!6;CL:0000404!2.92e-09!6;CL:0000047!1.13e-08!8 | |||
|ontology_enrichment_celltype_v019=CL:0002319;8.47e-18;25!CL:0000123;5.07e-17;2!CL:0000242;5.07e-17;2!CL:0000333;1.32e-15;5!CL:0000540;1.60e-12;6!CL:0000404;1.60e-12;6!CL:0000064;6.37e-12;3!CL:0000067;6.37e-12;3!CL:0005012;6.37e-12;3!CL:0002304;6.37e-12;3!CL:0000346;2.08e-11;3!CL:1000428;2.08e-11;3!CL:0000095;2.28e-10;17!CL:0002174;3.53e-09;1!CL:0000501;3.53e-09;1!CL:0000312;2.43e-07;5!CL:0002559;3.44e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000133,6.72e-27,59;CL:0000221,1.05e-21,72;CL:0002319,6.75e-18,25;CL:0000333,4.70e-17,41;CL:0000242,6.47e-17,2;CL:0000540,1.21e-12,6;CL:0000031,1.21e-12,6;CL:0000404,1.21e-12,6;CL:0000064,6.73e-12,3;CL:0000067,6.73e-12,3;CL:0005012,6.73e-12,3;CL:0002304,6.73e-12,3;CL:0000346,2.44e-11,3;CL:1000428,2.44e-11,3;CL:0000095,2.15e-10,17;CL:0000123,2.15e-10,17;CL:0000047,1.30e-09,8;CL:0002174,4.87e-09,1;CL:0000501,4.87e-09,1;CL:0000312,2.68e-07,5;CL:0002559,3.79e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000133;3.34e-13;59!CL:0000031;1.60e-12;6!CL:0000221;4.47e-09;72 | |||
|ontology_enrichment_disease=DOID:3095!1.51e-09!22;DOID:2994!1.51e-09!22;DOID:162!2.09e-07!235;DOID:14566!2.64e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:169;4.25e-13;6!DOID:3095;4.27e-09;22!DOID:2994;4.27e-09;22!DOID:171;4.73e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:169,4.81e-13,6;DOID:3095,3.92e-09,22;DOID:2994,3.92e-09,22;DOID:171,5.08e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0000073!1.55e-09!94;UBERON:0001016!1.55e-09!94;UBERON:0000924!2.94e-09!173;UBERON:0006601!2.94e-09!173;UBERON:0004121!1.01e-08!169;UBERON:0001017!6.60e-07!82;UBERON:0005743!7.72e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;1.32e-15;5!UBERON:0002410;1.32e-15;5!UBERON:0001778;6.37e-12;3!UBERON:0001775;6.37e-12;3!UBERON:0000412;2.08e-11;3!UBERON:0001992;2.08e-11;3!UBERON:0000488;3.68e-09;4!UBERON:0000010;6.76e-09;8!UBERON:0001003;1.17e-08;15!UBERON:0007376;1.17e-08;15!UBERON:0010371;4.14e-08;31!UBERON:0002073;3.44e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,1.53e-15,5;UBERON:0002410,1.53e-15,5;UBERON:0001778,6.73e-12,3;UBERON:0001775,6.73e-12,3;UBERON:0000412,2.44e-11,3;UBERON:0001992,2.44e-11,3;UBERON:0000488,3.84e-09,4;UBERON:0004121,6.72e-09,171;UBERON:0000924,6.72e-09,171;UBERON:0006601,6.72e-09,171;UBERON:0000010,7.33e-09,8;UBERON:0001003,1.32e-08,15;UBERON:0007376,1.32e-08,15;UBERON:0007383,1.32e-08,15;UBERON:0001016,3.61e-07,89;UBERON:0002073,3.79e-07,5;UBERON:0005086,3.79e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0.61560529038394,1.63200552995402,0,0.286235987131057,1.77936752594749,0.502170558379211,0,0,0,0,0,0,0,0,0,0,0.426507697462265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0.189069634328136,2.66075276955077,2.10803485663503,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0.354668382198357,0,0,0,0,0,0,0.151357427644931,0.576175924479999,0,0,0,0,0,0.323745888736263,0.280901613404497,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0.358779271377724,0,0,0.600182192168805,0.103052529238439,0,0,0.168776332241266,0,0.757301322732344,0,0,0,0,0,0,0,0,0.243947412259191,0.265059536642971,0,0.207322110030741,0.252320850875628,1.09493207722749,1.56449532329816,0,1.38134921352481,0.464367928031979,0,0,0,0,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0.100528972411631,0,0,0,0,0.34779121492523,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.2933531432838,0,0,0,0.26593811658487,0,0,0,0.532844358032199,0,0,0,0,0,2.37585561880029,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,2.31986643833309,0.502548796003046,1.91381625495949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0.0868836144680828,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308419387605311,0,0.492762936082855,1.03850885836724,0.929683027679674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0.096670718292122,0.154048617114644,0.307007349452259,0.827019434907183,0,0,0.255679882248303,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286822704408103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,2.50634477090067,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0.33307196799782,0,0,0,0,0,0.852408440419239,0,0,0,0,0,0,0,0.422250816255987,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,10.6870445704854,0,0,0,0,0,0.331737779793674,1.47773809476774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37950746544837,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0.971121518136371,0,0,0,0.063186579628488,0.150323419414493,0.103688191397247,0,0,0,0,0.284609546029793,0,0,0,0.0870592065804026,0,0,0,0.0730893170861856,0.246346371159628,0,0,0,0.137041924646751,0.19871461170299,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0.407712618220842,0.209205692624666,0,0.866851769704557,0.600420288709789,0,0,1.28929632425987,0.262887354279314,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0.321506296930038,1.92555211236127,0.83088067605837,0.674921674654501,0,0,0,0,0,0,0,0,0,0,0.76280561296425,0,0,0,0,0,0.170388021785422,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327872630709804,0,0,0,0,0,0,0,2.62862406378839,0.249960815924213,0,0,0.941063278792687,2.34167452903441,1.44921028610825,0.298509605773748,0.233713309847224,0.554805861502613,0.189403005275089,0,0,0,0,0.15543720058278,0.147855149989634,0,0,0.310525913752519,0.414706207840855,0,0,0,0,0.406870733204662,0,0,0,0,0,0,0,0,0,0,0.521988583930423,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511577485214607,3.5582187760905,8.33509491836251,2.29340240203229,0.169732529954025,0,0.371807292777007,0,0.318004350653419,0,0,0,0,0,0,0,0,0.504143392443436,0.0691572524642179,0,0,0,0,0,0.115525666150338,0,0,0,0.0752103283492573,0,0,0,0.163771917510097,0.147856086217045,0,0,0,0,0,0,0,0,0.127762427639595,0.535701835878287,0,0,0,0,0,0,0.0679697329768317,0,0.236387681767936,0.111231401892069,0,0,0,0,0.215927591218621,0,0,0.94808167039636,0,0.695433089210318,0,0,0,0,0,0.118332000730565,0,0,0.22910686854405,0,0.955538938977433,0,0,0.121917924982269,0,0,0,0,0.233939463462106,0.596852325484105,0.118920090777569,0,2.74851291863573,0,0,0,0,0.245148321753905,0,0.196308467114945,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0,0,0,0,0.371995018166751,0,0,0.378499274505237,1.74824915141913,0.506794004045748,0.407955318967927,0.26721740526556,0.0918948995348449,0.250707539292375,0.0757786982182394,0,0,0,0,0,0,0,0.224263725161227,0,0,0,0,0,0,0,0,0,1.9307228228694,0,0,0,0,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0.61560529038394,1.63200552995402,0,0.286235987131057,1.77936752594749,0.502170558379211,0,0,0,0,0,0,0,0,0,0,0.426507697462265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0.189069634328136,2.66075276955077,2.10803485663503,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0.354668382198357,0,0,0,0,0,0,0.151357427644931,0.576175924479999,0,0,0,0,0,0.323745888736263,0.280901613404497,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0.358779271377724,0,0,0.600182192168805,0.103052529238439,0,0,0.168776332241266,0,0.757301322732344,0,0,0,0,0,0,0,0,0.243947412259191,0.265059536642971,0,0.207322110030741,0.252320850875628,1.09493207722749,1.56449532329816,0,1.38134921352481,0.464367928031979,0,0,0,0,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0.100528972411631,0,0,0,0,0.34779121492523,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.2933531432838,0,0,0,0.26593811658487,0,0,0,0.532844358032199,0,0,0,0,0,2.37585561880029,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,2.31986643833309,0.502548796003046,1.91381625495949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0.0868836144680828,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308419387605311,0,0.492762936082855,1.03850885836724,0.929683027679674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0.096670718292122,0.154048617114644,0.307007349452259,0.827019434907183,0,0,0.255679882248303,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286822704408103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,2.50634477090067,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0.33307196799782,0,0,0,0,0,0.852408440419239,0,0,0,0,0,0,0,0.422250816255987,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,10.6870445704854,0,0,0,0,0,0.331737779793674,1.47773809476774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37950746544837,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0.971121518136371,0,0,0,0.063186579628488,0.150323419414493,0.103688191397247,0,0,0,0,0.284609546029793,0,0,0,0.0870592065804026,0,0,0,0.0730893170861856,0.246346371159628,0,0,0,0.137041924646751,0.19871461170299,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0.407712618220842,0.209205692624666,0,0.866851769704557,0.600420288709789,0,0,1.28929632425987,0.262887354279314,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0.321506296930038,1.92555211236127,0.83088067605837,0.674921674654501,0,0,0,0,0,0,0,0,0,0,0.76280561296425,0,0,0,0,0,0.170388021785422,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327872630709804,0,0,0,0,0,0,0,2.62862406378839,0.249960815924213,0,0,0.941063278792687,2.34167452903441,1.44921028610825,0.298509605773748,0.233713309847224,0.554805861502613,0.189403005275089,0,0,0,0,0.15543720058278,0.147855149989634,0,0,0.310525913752519,0.414706207840855,0,0,0,0,0.406870733204662,0,0,0,0,0,0,0,0,0,0,0.521988583930423,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511577485214607,3.5582187760905,8.33509491836251,2.29340240203229,0.169732529954025,0,0.371807292777007,0,0.318004350653419,0,0,0,0,0,0,0,0,0.504143392443436,0.0691572524642179,0,0,0,0,0,0.115525666150338,0,0,0,0.0752103283492573,0,0,0,0.163771917510097,0.147856086217045,0,0,0,0,0,0,0,0,0.127762427639595,0.535701835878287,0,0,0,0,0,0,0.0679697329768317,0,0.236387681767936,0.111231401892069,0,0,0,0,0.215927591218621,0,0,0.94808167039636,0,0.695433089210318,0,0,0,0,0,0.118332000730565,0,0,0.22910686854405,0,0.955538938977433,0,0,0.121917924982269,0,0,0,0,0.233939463462106,0.596852325484105,0.118920090777569,0,2.74851291863573,0,0,0,0,0.245148321753905,0,0.196308467114945,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0,0,0,0,0.371995018166751,0,0,0.378499274505237,1.74824915141913,0.506794004045748,0.407955318967927,0.26721740526556,0.0918948995348449,0.250707539292375,0.0757786982182394,0,0,0,0,0,0,0,0.224263725161227,0,0,0,0,0,0,0,0,0,1.9307228228694,0,0,0,0,0,0,0 | ||
|short_description=p@chr1:203491479..203491485,+ | |||
}} | }} |
Latest revision as of 02:30, 28 July 2015
Short description: | p@chr1:203491479..203491485, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:203491479..203491485, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectodermal cell | 6.72e-27 | 59 |
ectodermal cell | 1.05e-21 | 72 |
neural cell | 6.75e-18 | 25 |
migratory neural crest cell | 4.70e-17 | 41 |
Merkel cell | 6.47e-17 | 2 |
neuron | 1.21e-12 | 6 |
neuroblast | 1.21e-12 | 6 |
electrically signaling cell | 1.21e-12 | 6 |
ciliated cell | 6.73e-12 | 3 |
ciliated epithelial cell | 6.73e-12 | 3 |
multi-ciliated epithelial cell | 6.73e-12 | 3 |
non-pigmented ciliary epithelial cell | 6.73e-12 | 3 |
hair follicle dermal papilla cell | 2.44e-11 | 3 |
stem cell of epidermis | 2.44e-11 | 3 |
neuron associated cell | 2.15e-10 | 17 |
neuron associated cell (sensu Vertebrata) | 2.15e-10 | 17 |
neuronal stem cell | 1.30e-09 | 8 |
follicular cell of ovary | 4.87e-09 | 1 |
granulosa cell | 4.87e-09 | 1 |
keratinocyte | 2.68e-07 | 5 |
hair follicle cell | 3.79e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 1.53e-15 | 5 |
autonomic nervous system | 1.53e-15 | 5 |
ciliary epithelium | 6.73e-12 | 3 |
ciliary body | 6.73e-12 | 3 |
dermal papilla | 2.44e-11 | 3 |
papillary layer of dermis | 2.44e-11 | 3 |
atypical epithelium | 3.84e-09 | 4 |
ectoderm-derived structure | 6.72e-09 | 171 |
ectoderm | 6.72e-09 | 171 |
presumptive ectoderm | 6.72e-09 | 171 |
peripheral nervous system | 7.33e-09 | 8 |
skin epidermis | 1.32e-08 | 15 |
outer epithelium | 1.32e-08 | 15 |
enveloping layer of ectoderm | 1.32e-08 | 15 |
nervous system | 3.61e-07 | 89 |
hair follicle | 3.79e-07 | 5 |
hair follicle placode | 3.79e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 4.81e-13 | 6 |
germ cell and embryonal cancer | 3.92e-09 | 22 |
germ cell cancer | 3.92e-09 | 22 |
neuroectodermal tumor | 5.08e-08 | 10 |