FFCP PHASE1:Hg19::chr3:179370820..179370912,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8975 | |EntrezGene=8975 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12611 | |HGNC=12611 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000482333_5end | |association_with_transcript=0bp_to_ENST00000482333_5end | ||
|cluster_id=chr3:179370820..179370912,+ | |||
|coexpression_cluster_id=C20 | |coexpression_cluster_id=C20 | ||
|description=CAGE_peak_1_at_USP13_5end | |description=CAGE_peak_1_at_USP13_5end | ||
|id=chr3:179370820..179370912,+ | |id=chr3:179370820..179370912,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.45e-08!235;DOID:14566!4.77e-08!239 | |ontology_enrichment_disease=DOID:162!1.45e-08!235;DOID:14566!4.77e-08!239 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.40e-08,235;DOID:14566,4.62e-08,239 | |||
|ontology_enrichment_uberon=UBERON:0000073!4.53e-09!94;UBERON:0001016!4.53e-09!94;UBERON:0004121!8.27e-09!169;UBERON:0000924!1.03e-08!173;UBERON:0006601!1.03e-08!173;UBERON:0001017!1.13e-07!82;UBERON:0005743!1.53e-07!86;UBERON:0000153!4.31e-07!129;UBERON:0007811!4.31e-07!129;UBERON:0000955!5.51e-07!69;UBERON:0006238!5.51e-07!69;UBERON:0000033!6.57e-07!123 | |ontology_enrichment_uberon=UBERON:0000073!4.53e-09!94;UBERON:0001016!4.53e-09!94;UBERON:0004121!8.27e-09!169;UBERON:0000924!1.03e-08!173;UBERON:0006601!1.03e-08!173;UBERON:0001017!1.13e-07!82;UBERON:0005743!1.53e-07!86;UBERON:0000153!4.31e-07!129;UBERON:0007811!4.31e-07!129;UBERON:0000955!5.51e-07!69;UBERON:0006238!5.51e-07!69;UBERON:0000033!6.57e-07!123 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,5.09e-09,89;UBERON:0004121,2.47e-08,171;UBERON:0000924,2.47e-08,171;UBERON:0006601,2.47e-08,171;UBERON:0001017,1.77e-07,81;UBERON:0000955,8.64e-07,68;UBERON:0006238,8.64e-07,68 | |||
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| ||
|short_description=p1@USP13 | |short_description=p1@USP13 | ||
}} | }} |
Latest revision as of 21:12, 16 September 2015
Short description: | p1@USP13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_USP13_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | 0bp_to_ENST00000482333_5end |
EntrezGene: | USP13 |
HGNC: | 12611 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nervous system | 5.09e-09 | 89 |
ectoderm-derived structure | 2.47e-08 | 171 |
ectoderm | 2.47e-08 | 171 |
presumptive ectoderm | 2.47e-08 | 171 |
central nervous system | 1.77e-07 | 81 |
brain | 8.64e-07 | 68 |
future brain | 8.64e-07 | 68 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.40e-08 | 235 |
disease of cellular proliferation | 4.62e-08 | 239 |